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Transcriptional regulator of yeast form adherence 2

 TRY2_CANAL              Reviewed;         371 AA.
Q59LX5; A0A1D8PDH3;
16-APR-2014, integrated into UniProtKB/Swiss-Prot.
15-MAR-2017, sequence version 2.
22-NOV-2017, entry version 97.
RecName: Full=Transcriptional regulator of yeast form adherence 2;
Name=TRY2; Synonyms=UAF21; OrderedLocusNames=CAALFM_C105090WA;
ORFNames=CaO19.11544, CaO19.4062;
Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Debaryomycetaceae;
Candida/Lodderomyces clade; Candida.
NCBI_TaxID=237561;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=15123810; DOI=10.1073/pnas.0401648101;
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S.,
Magee B.B., Newport G., Thorstenson Y.R., Agabian N., Magee P.T.,
Davis R.W., Scherer S.;
"The diploid genome sequence of Candida albicans.";
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
[2]
GENOME REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
Chibana H., Nantel A., Magee P.T.;
"Assembly of the Candida albicans genome into sixteen supercontigs
aligned on the eight chromosomes.";
Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME
REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
"Assembly of a phased diploid Candida albicans genome facilitates
allele-specific measurements and provides a simple model for repeat
and indel structure.";
Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
[4]
INDUCTION.
PubMed=22265407; DOI=10.1016/j.cell.2011.10.048;
Nobile C.J., Fox E.P., Nett J.E., Sorrells T.R., Mitrovich Q.M.,
Hernday A.D., Tuch B.B., Andes D.R., Johnson A.D.;
"A recently evolved transcriptional network controls biofilm
development in Candida albicans.";
Cell 148:126-138(2012).
[5]
FUNCTION, AND DISRUPTION PHENOTYPE.
PubMed=22359502; DOI=10.1371/journal.ppat.1002525;
Finkel J.S., Xu W., Huang D., Hill E.M., Desai J.V., Woolford C.A.,
Nett J.E., Taff H., Norice C.T., Andes D.R., Lanni F., Mitchell A.P.;
"Portrait of Candida albicans adherence regulators.";
PLoS Pathog. 8:E1002525-E1002525(2012).
-!- FUNCTION: Transcription factor required for yeast cell adherence
to silicone substrate. {ECO:0000269|PubMed:22359502}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000305}.
-!- INDUCTION: Expression is induced in biofilm.
{ECO:0000269|PubMed:22265407}.
-!- DISRUPTION PHENOTYPE: Decreases cell adherence to silicone
substrate. {ECO:0000269|PubMed:22359502}.
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EMBL; CP017623; AOW26180.1; -; Genomic_DNA.
RefSeq; XP_710731.2; XM_705639.2.
ProteinModelPortal; Q59LX5; -.
PRIDE; Q59LX5; -.
GeneID; 3647670; -.
KEGG; cal:CAALFM_C105090WA; -.
CGD; CAL0000191257; TRY2.
InParanoid; Q59LX5; -.
KO; K12836; -.
OrthoDB; EOG092C30A1; -.
PRO; PR:Q59LX5; -.
Proteomes; UP000000559; Chromosome 1.
GO; GO:0089701; C:U2AF; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0003723; F:RNA binding; IEA:InterPro.
GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
GO; GO:1900189; P:positive regulation of cell adhesion involved in single-species biofilm formation; IMP:CGD.
GO; GO:0010811; P:positive regulation of cell-substrate adhesion; IMP:CGD.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:CGD.
GO; GO:0044011; P:single-species biofilm formation on inanimate substrate; IMP:CGD.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
Gene3D; 4.10.1000.10; -; 1.
InterPro; IPR035979; RBD_domain_sf.
InterPro; IPR000504; RRM_dom.
InterPro; IPR003954; RRM_dom_euk.
InterPro; IPR009145; U2AF_small.
InterPro; IPR000571; Znf_CCCH.
InterPro; IPR036855; Znf_CCCH_sf.
PANTHER; PTHR12620; PTHR12620; 1.
Pfam; PF00642; zf-CCCH; 1.
PRINTS; PR01848; U2AUXFACTOR.
SMART; SM00361; RRM_1; 1.
SMART; SM00356; ZnF_C3H1; 2.
SUPFAM; SSF54928; SSF54928; 1.
PROSITE; PS50102; RRM; 1.
PROSITE; PS50103; ZF_C3H1; 2.
2: Evidence at transcript level;
Cell adhesion; Complete proteome; Metal-binding; Nucleus;
Reference proteome; Repeat; Transcription; Transcription regulation;
Zinc; Zinc-finger.
CHAIN 1 371 Transcriptional regulator of yeast form
adherence 2.
/FTId=PRO_0000426092.
DOMAIN 192 279 RRM. {ECO:0000255|PROSITE-
ProRule:PRU00176}.
ZN_FING 16 44 C3H1-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00723}.
ZN_FING 281 309 C3H1-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00723}.
COMPBIAS 344 347 Poly-Ser.
SEQUENCE 371 AA; 42029 MW; 617892A0F3688275 CRC64;
MNRSSYSSQS DNRYSRNPAV LCSFYSKIGA CRHGEKCSKK HLKPISSRTI LLANLYQNPT
LNDDDYGHAN GIGSETSQII DNESVIKNSD TVGTVSQIDD SPHSNSGEVT KDETVETQEV
ETENSENIAE TGDVKIDHNE DQKQIEDVKE SDKVESSEEV QQDDKLHKED TLEKESEDNI
KQDENIEDAK LEDTEKDKLP EFTISQSQKD FDQFFQDIFV HISKLGQIRD IAVCENENNH
LAGNVYVMFE SAEDAYNANL QLNQEWYNGK PVYSDLSPVN DFNDACCEEY RDYHDCQRGA
MCNYMHVRLP SSDIEESLYE SQAKSYMLKQ LEELKKELPG DIRSSSSTND DETNGNENGI
SSTMAVLEQL S


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