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Transcriptional repressor CTCF

 A0A0A9Z697_LYGHE        Unreviewed;       642 AA.
A0A0A9Z697;
04-MAR-2015, integrated into UniProtKB/TrEMBL.
04-MAR-2015, sequence version 1.
25-OCT-2017, entry version 11.
SubName: Full=Transcriptional repressor CTCF {ECO:0000313|EMBL:JAG39401.1};
Name=CTCF_4 {ECO:0000313|EMBL:JAG39401.1};
Synonyms=CTCF_1 {ECO:0000313|EMBL:JAG39403.1},
CTCF_2 {ECO:0000313|EMBL:JAG39399.1},
CTCF_3 {ECO:0000313|EMBL:JAG39400.1},
CTCF_5 {ECO:0000313|EMBL:JAG39402.1},
CTCF_9 {ECO:0000313|EMBL:JAG39398.1};
ORFNames=CM83_92710 {ECO:0000313|EMBL:JAG39401.1},
CM83_92712 {ECO:0000313|EMBL:JAG39400.1},
CM83_92714 {ECO:0000313|EMBL:JAG39399.1},
CM83_92716 {ECO:0000313|EMBL:JAG39403.1},
CM83_92718 {ECO:0000313|EMBL:JAG39402.1},
CM83_92720 {ECO:0000313|EMBL:JAG39398.1};
Lygus hesperus (Western plant bug).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Paraneoptera; Hemiptera; Heteroptera;
Panheteroptera; Cimicomorpha; Miridae; Mirini; Lygus.
NCBI_TaxID=30085 {ECO:0000313|EMBL:JAG39401.1};
[1] {ECO:0000313|EMBL:JAG39401.1}
NUCLEOTIDE SEQUENCE.
PubMed=25401762;
Hull J.J., Chaney K., Geib S.M., Fabrick J.A., Brent C.S., Walsh D.,
Lavine L.C.;
"Transcriptome-Based Identification of ABC Transporters in the Western
Tarnished Plant Bug Lygus hesperus.";
PLoS ONE 9:E113046-E113046(2014).
[2] {ECO:0000313|EMBL:JAG39401.1}
NUCLEOTIDE SEQUENCE.
Hull J.;
Submitted (JUL-2014) to the EMBL/GenBank/DDBJ databases.
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EMBL; GBHO01004206; JAG39398.1; -; Transcribed_RNA.
EMBL; GBHO01004205; JAG39399.1; -; Transcribed_RNA.
EMBL; GBHO01004204; JAG39400.1; -; Transcribed_RNA.
EMBL; GBHO01004203; JAG39401.1; -; Transcribed_RNA.
EMBL; GBHO01004202; JAG39402.1; -; Transcribed_RNA.
EMBL; GBHO01004201; JAG39403.1; -; Transcribed_RNA.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
Gene3D; 3.30.40.10; -; 1.
InterPro; IPR006612; Znf_C2CH.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
InterPro; IPR013083; Znf_RING/FYVE/PHD.
Pfam; PF05485; THAP; 1.
SMART; SM00980; THAP; 1.
SMART; SM00355; ZnF_C2H2; 8.
SUPFAM; SSF57667; SSF57667; 4.
PROSITE; PS50950; ZF_THAP; 1.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 6.
4: Predicted;
DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00309};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00309};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00309};
Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00309}.
DOMAIN 1 79 THAP-type. {ECO:0000259|PROSITE:PS50950}.
DOMAIN 382 409 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 410 437 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 438 466 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 501 528 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 530 557 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 558 580 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
SEQUENCE 642 AA; 73779 MW; 1992230C18B10C21 CRC64;
MMDRCGARGC QNEATGRGGY SFFPVPTDPE LRDSWEFHLE QSDLPQSTVI CEKHFSSEEV
ITDENGEKTL KPNAVPSLKV KTIEEEGSSP VRRSSRKRVP KKVESSKGND SQSGKKKGTR
LLFKTTAKSP EKNKRTRASK NEKENSDLQQ DLTVKRSRKR RKNKESCDVP SKTSKKVELI
GDDKRGHAIA EWYLLDIFEA TRVITSVLHT GTLVTDCLVA NMEETIIEII SKLLQRLSSV
LITTLEKEFD IKCNILPVLR NLHENIKENV NELVTEENDN SAIQFKPDED SYEQALRCLD
SKDPPSVVEE VISSPFDEDF MLIEHSYCRP SEQEAEKTKK RTKGGEHSIK QKFQCGFCTF
KTFYKSKLRR HVKHHLHYKK RFECDMCDYC ATTTEAYSKH VRTHTGEKPY GCDLCDFRTA
NRSNLNRHRI IHEDVKPFAC PHCDHSTRQR GSLIHHIECA HNNTDRPKVK GRQSVYACGD
CSFITISRQE FIAHGKTHKN YNCSQCDFVG KDSKELKTHQ ATHKVEDRLL SCDLCNYSTF
RSAYLRRHVA THSMGKPFKC EVCLNTYRSQ AHLNMHARKH EIGPTARGLP CDGVLRLLCT
LLHKYTVRQS LEIEILNHEI GTCLQNYLDR VRPRLLDDPK PY


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