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Trichome differentiation protein GL1 (Myb-related protein 0) (AtMYB0) (Protein GLABRA 1) (Protein GLABROUS 1) (R2R3-MYB transcription factor GL1)

 GL1_ARATH               Reviewed;         228 AA.
P27900; Q39109; Q53YQ0; Q93V34; Q93VW0; Q93WP0; Q947R6; Q9LF81;
Q9LF82; Q9ST42;
01-AUG-1992, integrated into UniProtKB/Swiss-Prot.
18-OCT-2001, sequence version 2.
25-OCT-2017, entry version 151.
RecName: Full=Trichome differentiation protein GL1 {ECO:0000303|PubMed:1934056};
AltName: Full=Myb-related protein 0;
Short=AtMYB0;
AltName: Full=Protein GLABRA 1 {ECO:0000303|PubMed:11063707};
AltName: Full=Protein GLABROUS 1 {ECO:0000303|PubMed:10520748};
AltName: Full=R2R3-MYB transcription factor GL1 {ECO:0000303|PubMed:11597504};
Name=GL1 {ECO:0000303|PubMed:1934056}; Synonyms=MYB0;
OrderedLocusNames=At3g27920 {ECO:0000312|Araport:AT3G27920};
ORFNames=K16N12.17 {ECO:0000312|EMBL:BAB02538.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=1934056; DOI=10.1016/0092-8674(91)90523-2;
Oppenheimer D.G., Herman P.L., Sivakumaran S., Esch J.J., Marks M.D.;
"A myb gene required for leaf trichome differentiation in Arabidopsis
is expressed in stipules.";
Cell 67:483-493(1991).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND MUTAGENESIS OF 182-GLN--LEU-228
AND 202-LEU--LEU-228.
PubMed=8111017; DOI=10.1007/BF00040586;
Esch J.J., Oppenheimer D.G., Marks M.D.;
"Characterization of a weak allele of the GL1 gene of Arabidopsis
thaliana.";
Plant Mol. Biol. 24:203-207(1994).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10520748; DOI=10.3109/10425179809072193;
Shikazono N., Tanaka A., Yokota Y., Watanabe H., Tano S.;
"Nucleotide sequence of the GLABROUS1 gene of Arabidopsis thaliana
ecotype Columbia.";
DNA Seq. 9:177-181(1998).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], MUTAGENESIS OF GLY-100, AND
VARIANTS 130-VAL--GLU-132; SER-148 DEL; ARG-149; ARG-176 AND
222-SER--ILE-224.
STRAIN=cv. Aa-0, cv. An-1, cv. Ba-1, cv. Bla-1, cv. Bur-0, cv. Can-0,
cv. Columbia, cv. Di-0, cv. Es-0, cv. Gr-1, cv. Hi-0, cv. Ita-0,
cv. Kas-1, cv. Kon, cv. Landsberg erecta, cv. Ms-0, cv. Mt-0,
cv. Nd-0, cv. No-0, cv. Oy-0, cv. RLD, cv. Sha, cv. Te-0, cv. Tsu-0,
cv. Wassilewskija, and cv. Yo-0;
PubMed=11504855; DOI=10.1093/oxfordjournals.molbev.a003963;
Hauser M.-T., Harr B., Schloetterer C.;
"Trichome distribution in Arabidopsis thaliana and its close relative
Arabidopsis lyrata: molecular analysis of the candidate gene
GLABROUS1.";
Mol. Biol. Evol. 18:1754-1763(2001).
[5]
NUCLEOTIDE SEQUENCE [MRNA], GENE FAMILY, AND NOMENCLATURE.
STRAIN=cv. Columbia;
PubMed=11597504; DOI=10.1016/S1369-5266(00)00199-0;
Stracke R., Werber M., Weisshaar B.;
"The R2R3-MYB gene family in Arabidopsis thaliana.";
Curr. Opin. Plant Biol. 4:447-456(2001).
[6]
NUCLEOTIDE SEQUENCE [MRNA].
Qu L.-J., Gu H.;
"The MYB transcription factor family in Arabidopsis: a genome-wide
cloning and expression pattern analysis.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10907853; DOI=10.1093/dnares/7.3.217;
Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 3. II.
Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC
and BAC clones.";
DNA Res. 7:217-221(2000).
[8]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[9]
FUNCTION, INDUCTION BY GIBBERELLINS, AND TISSUE SPECIFICITY.
PubMed=9625690; DOI=10.1104/pp.117.2.375;
Perazza D., Vachon G., Herzog M.;
"Gibberellins promote trichome formation by Up-regulating GLABROUS1 in
arabidopsis.";
Plant Physiol. 117:375-383(1998).
[10]
FUNCTION, AND INTERACTION WITH GL3.
PubMed=11063707;
Payne C.T., Zhang F., Lloyd A.M.;
"GL3 encodes a bHLH protein that regulates trichome development in
arabidopsis through interaction with GL1 and TTG1.";
Genetics 156:1349-1362(2000).
[11]
TISSUE SPECIFICITY.
STRAIN=cv. Landsberg erecta; TISSUE=Silique;
PubMed=11437443; DOI=10.1006/dbio.2001.0287;
Kirik V., Schnittger A., Radchuk V., Adler K., Huelskamp M.,
Baeumlein H.;
"Ectopic expression of the Arabidopsis AtMYB23 gene induces
differentiation of trichome cells.";
Dev. Biol. 235:366-377(2001).
[12]
FUNCTION.
STRAIN=cv. Columbia; TISSUE=Root;
PubMed=12356720; DOI=10.1093/emboj/cdf524;
Schellmann S., Schnittger A., Kirik V., Wada T., Okada K.,
Beermann A., Thumfahrt J., Juergens G., Huelskamp M.;
"TRIPTYCHON and CAPRICE mediate lateral inhibition during trichome and
root hair patterning in Arabidopsis.";
EMBO J. 21:5036-5046(2002).
[13]
INTERACTION WITH BHLH2.
PubMed=12917293; DOI=10.1242/dev.00681;
Zhang F., Gonzalez A., Zhao M., Payne C.T., Lloyd A.M.;
"A network of redundant bHLH proteins functions in all TTG1-dependent
pathways of Arabidopsis.";
Development 130:4859-4869(2003).
[14]
INTERACTION WITH GL3, AND SUBCELLULAR LOCATION.
PubMed=14561633; DOI=10.1242/dev.00812;
Esch J.J., Chen M., Sanders M., Hillestad M., Ndkium S., Idelkope B.,
Neizer J., Marks M.D.;
"A contradictory GLABRA3 allele helps define gene interactions
controlling trichome development in Arabidopsis.";
Development 130:5885-5894(2003).
[15]
INDUCTION BY GEBP.
PubMed=12535344; DOI=10.1046/j.1365-313X.2003.01622.x;
Curaba J., Herzog M., Vachon G.;
"GeBP, the first member of a new gene family in Arabidopsis, encodes a
nuclear protein with DNA-binding activity and is regulated by KNAT1.";
Plant J. 33:305-317(2003).
[16]
FUNCTION, AND INTERACTION WITH BHLH2 AND BHLH12.
PubMed=15361138; DOI=10.1111/j.1365-313X.2004.02183.x;
Zimmermann I.M., Heim M.A., Weisshaar B., Uhrig J.F.;
"Comprehensive identification of Arabidopsis thaliana MYB
transcription factors interacting with R/B-like BHLH proteins.";
Plant J. 40:22-34(2004).
[17]
FUNCTION, INTERACTION WITH GL3, AND DEVELOPMENTAL STAGE.
PubMed=15728674; DOI=10.1242/dev.01708;
Kirik V., Lee M.M., Wester K., Herrmann U., Zheng Z., Oppenheimer D.,
Schiefelbein J., Hulskamp M.;
"Functional diversification of MYB23 and GL1 genes in trichome
morphogenesis and initiation.";
Development 132:1477-1485(2005).
[18]
GENE FAMILY.
PubMed=16463103; DOI=10.1007/s11103-005-2910-y;
Chen Y., Yang X., He K., Liu M., Li J., Gao Z., Lin Z., Zhang Y.,
Wang X., Qiu X., Shen Y., Zhang L., Deng X., Luo J., Deng X.-W.,
Chen Z., Gu H., Qu L.-J.;
"The MYB transcription factor superfamily of Arabidopsis: expression
analysis and phylogenetic comparison with the rice MYB family.";
Plant Mol. Biol. 60:107-124(2006).
[19]
INTERACTION WITH MYB82, AND SUBUNIT.
STRAIN=cv. Columbia;
PubMed=24803498; DOI=10.1093/jxb/eru179;
Liang G., He H., Li Y., Ai Q., Yu D.;
"MYB82 functions in regulation of trichome development in
Arabidopsis.";
J. Exp. Bot. 65:3215-3223(2014).
-!- FUNCTION: Transcription activator, when associated with
BHLH2/EGL3/MYC146 or BHLH12/MYC1. Involved in epidermal cell fate
specification in leaves. Together with TTG1 and GL3, promotes
trichome formation and endoreplication. Regulates the production
of a signal that induces hair (trichome) precursor cells on leaf
primordia to differentiate. Binds to the WER-binding sites (WBS)
promoter regions and activates the transcription of target genes
(By similarity). {ECO:0000250, ECO:0000269|PubMed:11063707,
ECO:0000269|PubMed:12356720, ECO:0000269|PubMed:15361138,
ECO:0000269|PubMed:15728674, ECO:0000269|PubMed:9625690}.
-!- SUBUNIT: Homodimer and heterodimer with MYB82 (PubMed:24803498).
Interacts directly with GL3 and BHLH2. Part of a complex made of
GL1, GL3 or BHLH2, and TTG1. Interacts also with BHLH2/EGL3/MYC146
and BHLH12/MYC1. Interacts with MYB82 (PubMed:24803498).
{ECO:0000269|PubMed:11063707, ECO:0000269|PubMed:12917293,
ECO:0000269|PubMed:14561633, ECO:0000269|PubMed:15361138,
ECO:0000269|PubMed:15728674, ECO:0000269|PubMed:24803498}.
-!- INTERACTION:
Q9FN69:GL3; NbExp=5; IntAct=EBI-1543742, EBI-533348;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-
ProRule:PRU00625, ECO:0000269|PubMed:14561633}. Note=Detected in
trichome nucleus.
-!- TISSUE SPECIFICITY: Expressed in leaves, stems and flowers
(PubMed:11437443). Expressed in trichome cells and in leaf
primordia (PubMed:9625690). {ECO:0000269|PubMed:11437443,
ECO:0000269|PubMed:9625690}.
-!- DEVELOPMENTAL STAGE: Ubiquitous in young leaves primordia. Becomes
more prominent in developing trichome cells but disappears
progressively when trichomes begin to initiate branches.
{ECO:0000269|PubMed:15728674}.
-!- INDUCTION: Up-regulated by gibberellins (PubMed:9625690). May be
regulated by GEBP and GEBP-like proteins (PubMed:12535344).
{ECO:0000269|PubMed:12535344, ECO:0000269|PubMed:9625690}.
-!- WEB RESOURCE: Name=Protein Spotlight; Note=More to it than meets
the finger - Issue 120 of August 2010;
URL="http://web.expasy.org/spotlight/back_issues/120";
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EMBL; M79448; AAC97387.1; -; Genomic_DNA.
EMBL; L22786; AAC97388.1; -; Genomic_DNA.
EMBL; AB006078; BAA86879.1; -; Genomic_DNA.
EMBL; AJ243899; CAB97484.1; -; Genomic_DNA.
EMBL; AJ243900; CAB97485.1; -; Genomic_DNA.
EMBL; AF263690; AAL01215.1; -; Genomic_DNA.
EMBL; AF263691; AAL01216.1; -; Genomic_DNA.
EMBL; AF263692; AAL01217.1; -; Genomic_DNA.
EMBL; AF263693; AAL01218.1; -; Genomic_DNA.
EMBL; AF263694; AAL01219.1; -; Genomic_DNA.
EMBL; AF263695; AAL01220.1; -; Genomic_DNA.
EMBL; AF263696; AAL01221.1; -; Genomic_DNA.
EMBL; AF263697; AAL01222.1; -; Genomic_DNA.
EMBL; AF263698; AAL01223.1; -; Genomic_DNA.
EMBL; AF263699; AAL01224.1; -; Genomic_DNA.
EMBL; AF263700; AAL01225.1; -; Genomic_DNA.
EMBL; AF263701; AAL01226.1; -; Genomic_DNA.
EMBL; AF263702; AAL01227.1; -; Genomic_DNA.
EMBL; AF263703; AAL01228.1; -; Genomic_DNA.
EMBL; AF263704; AAL01229.1; -; Genomic_DNA.
EMBL; AF263705; AAL01230.1; -; Genomic_DNA.
EMBL; AF263706; AAL01231.1; -; Genomic_DNA.
EMBL; AF263707; AAL01232.1; -; Genomic_DNA.
EMBL; AF263708; AAL01233.1; -; Genomic_DNA.
EMBL; AF263709; AAL01234.1; -; Genomic_DNA.
EMBL; AF263710; AAL01235.1; -; Genomic_DNA.
EMBL; AF263711; AAL01236.1; -; Genomic_DNA.
EMBL; AF263712; AAL01237.1; -; Genomic_DNA.
EMBL; AF263713; AAL01238.1; -; Genomic_DNA.
EMBL; AF263714; AAL01239.1; -; Genomic_DNA.
EMBL; AF263715; AAL01240.1; -; Genomic_DNA.
EMBL; AF263718; AAL01243.1; -; Genomic_DNA.
EMBL; AF263719; AAL01244.1; -; Genomic_DNA.
EMBL; AF495524; AAM14620.1; -; mRNA.
EMBL; AY519590; AAS10060.1; -; mRNA.
EMBL; AP000371; BAB02538.1; -; Genomic_DNA.
EMBL; CP002686; AEE77380.1; -; Genomic_DNA.
PIR; A39289; TVMUG1.
RefSeq; NP_189430.1; NM_113708.2.
UniGene; At.42881; -.
ProteinModelPortal; P27900; -.
SMR; P27900; -.
BioGrid; 7745; 10.
DIP; DIP-38476N; -.
IntAct; P27900; 5.
STRING; 3702.AT3G27920.1; -.
PaxDb; P27900; -.
EnsemblPlants; AT3G27920.1; AT3G27920.1; AT3G27920.
GeneID; 822415; -.
Gramene; AT3G27920.1; AT3G27920.1; AT3G27920.
KEGG; ath:AT3G27920; -.
Araport; AT3G27920; -.
TAIR; locus:2086475; AT3G27920.
eggNOG; KOG0048; Eukaryota.
eggNOG; COG5147; LUCA.
InParanoid; P27900; -.
KO; K09422; -.
OMA; EEDNILM; -.
OrthoDB; EOG09360LV2; -.
PhylomeDB; P27900; -.
PRO; PR:P27900; -.
Proteomes; UP000006548; Chromosome 3.
ExpressionAtlas; P27900; baseline and differential.
Genevisible; P27900; AT.
GO; GO:0005634; C:nucleus; TAS:TAIR.
GO; GO:0003677; F:DNA binding; IDA:TAIR.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0001135; F:transcription factor activity, RNA polymerase II transcription factor recruiting; IBA:GO_Central.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; ISS:TAIR.
GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
GO; GO:0001708; P:cell fate specification; IMP:TAIR.
GO; GO:0009740; P:gibberellic acid mediated signaling pathway; TAS:TAIR.
GO; GO:0009867; P:jasmonic acid mediated signaling pathway; IMP:TAIR.
GO; GO:0032880; P:regulation of protein localization; IMP:TAIR.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:2000039; P:regulation of trichome morphogenesis; IMP:TAIR.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0010026; P:trichome differentiation; IMP:TAIR.
GO; GO:0048629; P:trichome patterning; IMP:TAIR.
CDD; cd00167; SANT; 2.
InterPro; IPR009057; Homeobox-like.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 2.
SMART; SM00717; SANT; 2.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 2.
1: Evidence at protein level;
Activator; Complete proteome; Developmental protein; DNA-binding;
Nucleus; Polymorphism; Reference proteome; Repeat; Transcription;
Transcription regulation.
CHAIN 1 228 Trichome differentiation protein GL1.
/FTId=PRO_0000197071.
DOMAIN 11 63 HTH myb-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DOMAIN 64 118 HTH myb-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 39 63 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
DNA_BIND 91 114 H-T-H motif. {ECO:0000255|PROSITE-
ProRule:PRU00625}.
VARIANT 130 132 GED -> VEE (in strain: cv. Can-0).
VARIANT 148 148 Missing (in strain: cv. Kas-1, cv. Ms-0).
{ECO:0000269|PubMed:11504855}.
VARIANT 149 149 C -> R (in strain: cv. Aa-0, cv. An-1,
cv. Bur-0, cv. Can-0, cv. Es-0, cv. Gr-1,
cv. Hi-0, cv. Ita-0, cv. Kas-1, cv. Ms-0,
cv. Mt-0, cv. Nd-0, cv. No-0, cv. Oy-0,
cv. RLD, cv. Tsu-0, cv. Wassilewskija and
cv. Yo-0). {ECO:0000269|PubMed:11504855}.
VARIANT 176 176 P -> R (in strain: cv. Di-0 and cv.
Landsberg erecta).
{ECO:0000269|PubMed:11504855}.
VARIANT 222 224 GDV -> SDI (in strain: cv. Aa-0, cv. An-
1, cv. Bur-0, cv. Can-0, cv. Es-0, cv.
Gr-1, cv. Hi-0, cv. Ita-0, cv. Kas-1, cv.
Ms-0, cv. Mt-0, cv. Nd-0, cv. No-0, cv.
Oy-0, cv. RLD, cv. Tsu-0, cv.
Wassilewskija and cv. Yo-0).
MUTAGEN 100 100 G->R: In gl1-65; few trichomes on leaf
margins, cauline leaves, and stems.
{ECO:0000269|PubMed:11504855}.
MUTAGEN 182 228 Missing: In gl1-323; few trichomes on
leaf margins, cauline leaves.
{ECO:0000269|PubMed:8111017}.
MUTAGEN 202 228 Missing: In gl1-2; reduced trichome
density, truncated trichomes.
{ECO:0000269|PubMed:8111017}.
SEQUENCE 228 AA; 26339 MW; 822A8646F446F6B9 CRC64;
MRIRRRDEKE NQEYKKGLWT VEEDNILMDY VLNHGTGQWN RIVRKTGLKR CGKSCRLRWM
NYLSPNVNKG NFTEQEEDLI IRLHKLLGNR WSLIAKRVPG RTDNQVKNYW NTHLSKKLVG
DYSSAVKTTG EDDDSPPSLF ITAATPSSCH HQQENIYENI AKSFNGVVSA SYEDKPKQEL
AQKDVLMATT NDPSHYYGNN ALWVHDDDFE LSSLVMMNFA SGDVEYCL


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