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Tubulin gamma chain

 M9PDN9_DROME            Unreviewed;       457 AA.
M9PDN9;
26-JUN-2013, integrated into UniProtKB/TrEMBL.
26-JUN-2013, sequence version 1.
12-SEP-2018, entry version 44.
RecName: Full=Tubulin gamma chain {ECO:0000256|RuleBase:RU000352};
Name=gammaTub37C {ECO:0000313|EMBL:AGB93100.1,
ECO:0000313|FlyBase:FBgn0010097};
Synonyms=CG17566 {ECO:0000313|EMBL:AGB93100.1},
D.m.GAMMA-37C {ECO:0000313|EMBL:AGB93100.1},
Dmel\CG17566 {ECO:0000313|EMBL:AGB93100.1},
fs(2)TW1 {ECO:0000313|EMBL:AGB93100.1},
fs(2)TWI {ECO:0000313|EMBL:AGB93100.1},
fsTW1 {ECO:0000313|EMBL:AGB93100.1},
g-Tubulin {ECO:0000313|EMBL:AGB93100.1},
gamma Tub37CD {ECO:0000313|EMBL:AGB93100.1},
gamma tubulin {ECO:0000313|EMBL:AGB93100.1},
gamma-Tub {ECO:0000313|EMBL:AGB93100.1},
gamma-tub {ECO:0000313|EMBL:AGB93100.1},
gamma-Tub37C {ECO:0000313|EMBL:AGB93100.1},
gamma-tub37C {ECO:0000313|EMBL:AGB93100.1},
gamma-tub37CD {ECO:0000313|EMBL:AGB93100.1},
gamma-tubulin {ECO:0000313|EMBL:AGB93100.1},
gamma[mat] {ECO:0000313|EMBL:AGB93100.1},
gammaTUB {ECO:0000313|EMBL:AGB93100.1},
gammaTub {ECO:0000313|EMBL:AGB93100.1},
gammatub {ECO:0000313|EMBL:AGB93100.1},
gammaTub2 {ECO:0000313|EMBL:AGB93100.1},
gammaTUB37C {ECO:0000313|EMBL:AGB93100.1},
gammaTub37c {ECO:0000313|EMBL:AGB93100.1},
gammaTub37CD {ECO:0000313|EMBL:AGB93100.1},
GTU88* {ECO:0000313|EMBL:AGB93100.1},
PL10 {ECO:0000313|EMBL:AGB93100.1},
Rb1011 {ECO:0000313|EMBL:AGB93100.1},
Tub3B {ECO:0000313|EMBL:AGB93100.1},
TW1 {ECO:0000313|EMBL:AGB93100.1};
ORFNames=CG17566 {ECO:0000313|FlyBase:FBgn0010097},
Dmel_CG17566 {ECO:0000313|EMBL:AGB93100.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[8] {ECO:0000313|EMBL:AGB93100.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
-!- FUNCTION: Tubulin is the major constituent of microtubules. The
gamma chain is found at microtubule organizing centers (MTOC) such
as the spindle poles or the centrosome.
{ECO:0000256|RuleBase:RU000352}.
-!- SIMILARITY: Belongs to the tubulin family.
{ECO:0000256|RuleBase:RU000352, ECO:0000256|SAAS:SAAS00576975}.
-----------------------------------------------------------------------
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EMBL; AE014134; AGB93100.1; -; Genomic_DNA.
RefSeq; NP_001260565.1; NM_001273636.1.
RefSeq; NP_476922.1; NM_057574.5.
UniGene; Dm.469; -.
ProteinModelPortal; M9PDN9; -.
SMR; M9PDN9; -.
PRIDE; M9PDN9; -.
EnsemblMetazoa; FBtr0081228; FBpp0080769; FBgn0010097.
EnsemblMetazoa; FBtr0332572; FBpp0304827; FBgn0010097.
GeneID; 35199; -.
KEGG; dme:Dmel_CG17566; -.
CTD; 35199; -.
FlyBase; FBgn0010097; gammaTub37C.
eggNOG; KOG1374; Eukaryota.
eggNOG; COG5023; LUCA.
KO; K10389; -.
OMA; RRESMFK; -.
OrthoDB; EOG091G08A9; -.
PhylomeDB; M9PDN9; -.
ChiTaRS; gammaTub37C; fly.
GenomeRNAi; 35199; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0010097; Expressed in 9 organ(s), highest expression level in secondary oocyte.
ExpressionAtlas; M9PDN9; baseline and differential.
GO; GO:0000930; C:gamma-tubulin complex; IEA:InterPro.
GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO; GO:0005525; F:GTP binding; IEA:UniProtKB-UniRule.
GO; GO:0003924; F:GTPase activity; IEA:UniProtKB-UniRule.
GO; GO:0031122; P:cytoplasmic microtubule organization; IEA:InterPro.
GO; GO:0007020; P:microtubule nucleation; IEA:InterPro.
CDD; cd02188; gamma_tubulin; 1.
Gene3D; 1.10.287.600; -; 1.
Gene3D; 3.30.1330.20; -; 1.
Gene3D; 3.40.50.1440; -; 1.
InterPro; IPR002454; Gamma_tubulin.
InterPro; IPR008280; Tub_FtsZ_C.
InterPro; IPR000217; Tubulin.
InterPro; IPR018316; Tubulin/FtsZ_2-layer-sand-dom.
InterPro; IPR037103; Tubulin/FtsZ_C_sf.
InterPro; IPR036525; Tubulin/FtsZ_GTPase_sf.
InterPro; IPR023123; Tubulin_C.
InterPro; IPR017975; Tubulin_CS.
InterPro; IPR003008; Tubulin_FtsZ_GTPase.
PANTHER; PTHR11588; PTHR11588; 1.
Pfam; PF00091; Tubulin; 1.
Pfam; PF03953; Tubulin_C; 1.
PRINTS; PR01164; GAMMATUBULIN.
PRINTS; PR01161; TUBULIN.
SMART; SM00864; Tubulin; 1.
SMART; SM00865; Tubulin_C; 1.
SUPFAM; SSF52490; SSF52490; 1.
SUPFAM; SSF55307; SSF55307; 1.
PROSITE; PS00227; TUBULIN; 1.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
GTP-binding {ECO:0000256|RuleBase:RU000352,
ECO:0000256|SAAS:SAAS00977278};
Microtubule {ECO:0000256|RuleBase:RU000352,
ECO:0000256|SAAS:SAAS00576796};
Nucleotide-binding {ECO:0000256|RuleBase:RU000352,
ECO:0000256|SAAS:SAAS00977278};
Reference proteome {ECO:0000313|Proteomes:UP000000803}.
DOMAIN 48 247 Tubulin. {ECO:0000259|SMART:SM00864}.
DOMAIN 249 394 Tubulin_C. {ECO:0000259|SMART:SM00865}.
SEQUENCE 457 AA; 51296 MW; 00C326DC5744618A CRC64;
MPSEIITLQL GQCGNQIGFE FWKRLCLEHG ISPDGVLEDF ATDGQDRKDV FFYQADDNHY
IPRAVLIDLE PRVINNIMTS PYSKLYNQEN VFLSKHGGGA GNNWASGFSQ GEKVQEEVFD
ILDREADGSD SLEGFVLCHS IAGGTGSGMG SYVLERLSER FPKKLIQTYS VFPNQDEISD
VVVQPYNSIL TLKRLTKCAD SVVVLDNTAL NRIATERLHI QTPTFTQINN LVSTIMSLST
TTLRYPSYMN NNLIGLTASL IPTPQLHFLM TGYTPLMSDC ETKTSVRKTT VLDVMRRLLQ
PKNMMVSALT DKQSRQCFVS ILNIIQGEVD PSQVHKSLQR IRERKLANFI PWGPASIQVA
LPRSSPYVQS AHKVSGLMMA NHTGISSLFK RALAQYDKLR KRNAFLDNFR RESMFQDDLT
ELDIARDTVD CLVQEYEAAT QIDYPQWSPA VEASKAG


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