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Tumor necrosis factor ligand 1F

 A0A0U5J7Z4_CAVPO        Unreviewed;       234 AA.
A0A0U5J7Z4;
16-MAR-2016, integrated into UniProtKB/TrEMBL.
16-MAR-2016, sequence version 1.
27-SEP-2017, entry version 14.
SubName: Full=Tumor necrosis factor ligand 1F {ECO:0000313|EMBL:CTQ86186.1};
Name=TNLG1F {ECO:0000313|EMBL:CTQ86186.1};
Cavia porcellus (Guinea pig).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
Hystricomorpha; Caviidae; Cavia.
NCBI_TaxID=10141 {ECO:0000313|EMBL:CTQ86186.1};
[1] {ECO:0000313|EMBL:CTQ86186.1}
NUCLEOTIDE SEQUENCE.
PubMed=26646413; DOI=10.1007/s00251-015-0887-5;
Premzl M.;
"Comparative genomic analysis of eutherian tumor necrosis factor
ligand genes.";
Immunogenetics 68:125-132(2016).
-!- SUBUNIT: Homotrimer. {ECO:0000256|SAAS:SAAS00562244}.
-!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|SAAS:SAAS00568730}.
-!- SIMILARITY: Belongs to the tumor necrosis factor family.
{ECO:0000256|SAAS:SAAS00758062}.
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EMBL; LN874421; CTQ86186.1; -; mRNA.
RefSeq; NP_001166496.1; NM_001173025.1.
ProteinModelPortal; A0A0U5J7Z4; -.
SMR; A0A0U5J7Z4; -.
GeneID; 100135630; -.
CTD; 7124; -.
OMA; PWYEPIY; -.
GO; GO:0005615; C:extracellular space; IEA:UniProtKB-KW.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005125; F:cytokine activity; IEA:UniProtKB-KW.
GO; GO:0005164; F:tumor necrosis factor receptor binding; IEA:InterPro.
GO; GO:0006955; P:immune response; IEA:InterPro.
Gene3D; 2.60.120.40; -; 1.
InterPro; IPR006053; TNF.
InterPro; IPR002959; TNF_alpha.
InterPro; IPR021184; TNF_CS.
InterPro; IPR006052; TNF_dom.
InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
PANTHER; PTHR11471:SF46; PTHR11471:SF46; 1.
Pfam; PF00229; TNF; 1.
PRINTS; PR01234; TNECROSISFCT.
PRINTS; PR01235; TNFALPHA.
SMART; SM00207; TNF; 1.
SUPFAM; SSF49842; SSF49842; 1.
PROSITE; PS00251; TNF_1; 1.
PROSITE; PS50049; TNF_2; 1.
2: Evidence at transcript level;
Cytokine {ECO:0000256|SAAS:SAAS00562264};
Membrane {ECO:0000256|SAAS:SAAS00080915, ECO:0000256|SAM:Phobius};
Secreted {ECO:0000256|SAAS:SAAS00080914};
Transmembrane {ECO:0000256|SAAS:SAAS00080915,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00080915,
ECO:0000256|SAM:Phobius}.
TRANSMEM 30 55 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 91 234 TNF_2. {ECO:0000259|PROSITE:PS50049}.
SEQUENCE 234 AA; 25794 MW; 7272C940393E7E9B CRC64;
MSTESMIRDV ELAEEQLPKK AGGPQGSRRC WCLSLFSFLL VAGATTLFCL LHFGVIGPQR
EEQFSSGPPF RPLAQTLTLR SASQNDNDKP VAHVVANQQA EEELQWLSKR ANALLANGMG
LSDNQLVVPS DGLYLIYSQV LFKGQGCPSY LLLTHTVSRL AVSYPEKVNL LSAIKSPCQK
ETPEGAERKP WYEPIYLGGV FQLQKGDRLS AEVNLPQYLD FADSGQIYFG VIAL


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