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Tumor necrosis factor receptor superfamily member 10C (Antagonist decoy receptor for TRAIL/Apo-2L) (Decoy TRAIL receptor without death domain) (Decoy receptor 1) (DcR1) (Lymphocyte inhibitor of TRAIL) (TNF-related apoptosis-inducing ligand receptor 3) (TRAIL receptor 3) (TRAIL-R3) (TRAIL receptor without an intracellular domain) (CD antigen CD263)

 TR10C_HUMAN             Reviewed;         259 AA.
O14798; O14755; Q08AS6; Q6FH98; Q6UXM5;
26-SEP-2001, integrated into UniProtKB/Swiss-Prot.
24-NOV-2009, sequence version 3.
25-APR-2018, entry version 152.
RecName: Full=Tumor necrosis factor receptor superfamily member 10C;
AltName: Full=Antagonist decoy receptor for TRAIL/Apo-2L;
AltName: Full=Decoy TRAIL receptor without death domain;
AltName: Full=Decoy receptor 1;
Short=DcR1;
AltName: Full=Lymphocyte inhibitor of TRAIL;
AltName: Full=TNF-related apoptosis-inducing ligand receptor 3;
Short=TRAIL receptor 3;
Short=TRAIL-R3;
AltName: Full=TRAIL receptor without an intracellular domain;
AltName: CD_antigen=CD263;
Flags: Precursor;
Name=TNFRSF10C; Synonyms=DCR1, LIT, TRAILR3, TRID;
ORFNames=UNQ321/PRO366;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-229.
PubMed=9325248; DOI=10.1074/jbc.272.41.25417;
MacFarlane M., Ahmad M., Srinivasula S.M., Fernandes-Alnemri T.,
Cohen G.M., Alnemri E.S.;
"Identification and molecular cloning of two novel receptors for the
cytotoxic ligand TRAIL.";
J. Biol. Chem. 272:25417-25420(1997).
[2]
NUCLEOTIDE SEQUENCE [MRNA], CHARACTERIZATION, AND VARIANT THR-229.
TISSUE=Foreskin fibroblast;
PubMed=9314565; DOI=10.1084/jem.186.7.1165;
Degli-Esposti M.A., Smolak P.J., Walczak H., Waugh J., Huang C.-P.,
DuBose R.F., Goodwin R.G., Smith C.A.;
"Cloning and characterization of TRAIL-R3, a novel member of the
emerging TRAIL receptor family.";
J. Exp. Med. 186:1165-1170(1997).
[3]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-229.
PubMed=9242610; DOI=10.1126/science.277.5327.815;
Pan G., Ni J., Wei Y.-F., Yu G.-L., Gentz R., Dixit V.M.;
"An antagonist decoy receptor and a death domain-containing receptor
for TRAIL.";
Science 277:815-818(1997).
[4]
NUCLEOTIDE SEQUENCE [MRNA], PROTEIN SEQUENCE OF N-TERMINUS, AND
VARIANT THR-229.
PubMed=9242611; DOI=10.1126/science.277.5327.818;
Sheridan J.P., Marsters S.A., Pitti R.M., Gurney A., Skubatch M.,
Baldwin D.T., Ramakrishnan L., Gray C.L., Baker K., Wood W.I.,
Goddard A.D., Godowski P.J., Ashkenazi A.;
"Control of TRAIL-induced apoptosis by a family of signaling and decoy
receptors.";
Science 277:818-821(1997).
[5]
NUCLEOTIDE SEQUENCE [MRNA], CHARACTERIZATION, AND VARIANT THR-229.
TISSUE=Liver, and Spleen;
PubMed=9373179; DOI=10.1016/S0014-5793(97)01231-3;
Schneider P., Bodmer J.-L., Thome M., Hofmann K., Holler N.,
Tschopp J.;
"Characterization of two receptors for TRAIL.";
FEBS Lett. 416:329-334(1997).
[6]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-229.
PubMed=9551946;
Mongkolsapaya J., Cowper A.E., Xu X.-N., Morris G., McMichael A.J.,
Bell J.I., Screaton G.R.;
"Lymphocyte inhibitor of TRAIL (TNF-related apoptosis-inducing
ligand): a new receptor protecting lymphocytes from the death ligand
TRAIL.";
J. Immunol. 160:3-6(1998).
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT THR-229.
PubMed=12975309; DOI=10.1101/gr.1293003;
Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J.,
Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P.,
Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E., Heldens S.,
Huang A., Kim H.S., Klimowski L., Jin Y., Johnson S., Lee J.,
Lewis L., Liao D., Mark M.R., Robbie E., Sanchez C., Schoenfeld J.,
Seshagiri S., Simmons L., Singh J., Smith V., Stinson J., Vagts A.,
Vandlen R.L., Watanabe C., Wieand D., Woods K., Xie M.-H.,
Yansura D.G., Yi S., Yu G., Yuan J., Zhang M., Zhang Z., Goddard A.D.,
Wood W.I., Godowski P.J., Gray A.M.;
"The secreted protein discovery initiative (SPDI), a large-scale
effort to identify novel human secreted and transmembrane proteins: a
bioinformatics assessment.";
Genome Res. 13:2265-2270(2003).
[8]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Ebert L., Schick M., Neubert P., Schatten R., Henze S., Korn B.;
"Cloning of human full open reading frames in Gateway(TM) system entry
vector (pDONR201).";
Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
[9]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16421571; DOI=10.1038/nature04406;
Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S.,
Garber M., Kodira C.D., Schueler M.G., Shimizu A., Whittaker C.A.,
Chang J.L., Cuomo C.A., Dewar K., FitzGerald M.G., Yang X.,
Allen N.R., Anderson S., Asakawa T., Blechschmidt K., Bloom T.,
Borowsky M.L., Butler J., Cook A., Corum B., DeArellano K.,
DeCaprio D., Dooley K.T., Dorris L. III, Engels R., Gloeckner G.,
Hafez N., Hagopian D.S., Hall J.L., Ishikawa S.K., Jaffe D.B.,
Kamat A., Kudoh J., Lehmann R., Lokitsang T., Macdonald P.,
Major J.E., Matthews C.D., Mauceli E., Menzel U., Mihalev A.H.,
Minoshima S., Murayama Y., Naylor J.W., Nicol R., Nguyen C.,
O'Leary S.B., O'Neill K., Parker S.C.J., Polley A., Raymond C.K.,
Reichwald K., Rodriguez J., Sasaki T., Schilhabel M., Siddiqui R.,
Smith C.L., Sneddon T.P., Talamas J.A., Tenzin P., Topham K.,
Venkataraman V., Wen G., Yamazaki S., Young S.K., Zeng Q.,
Zimmer A.R., Rosenthal A., Birren B.W., Platzer M., Shimizu N.,
Lander E.S.;
"DNA sequence and analysis of human chromosome 8.";
Nature 439:331-335(2006).
[10]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT THR-229.
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[11]
PROTEIN SEQUENCE OF 26-40.
PubMed=15340161; DOI=10.1110/ps.04682504;
Zhang Z., Henzel W.J.;
"Signal peptide prediction based on analysis of experimentally
verified cleavage sites.";
Protein Sci. 13:2819-2824(2004).
-!- FUNCTION: Receptor for the cytotoxic ligand TRAIL. Lacks a
cytoplasmic death domain and hence is not capable of inducing
apoptosis. May protect cells against TRAIL mediated apoptosis by
competing with TRAIL-R1 and R2 for binding to the ligand.
-!- SUBCELLULAR LOCATION: Cell membrane; Lipid-anchor, GPI-anchor.
-!- TISSUE SPECIFICITY: Higher expression in normal tissues than in
tumor cell lines. Highly expressed in peripheral blood
lymphocytes, spleen, skeletal muscle, placenta, lung and heart.
-!- PTM: N-glycosylated and O-glycosylated.
-!- SEQUENCE CAUTION:
Sequence=AAB71413.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};
Sequence=AAC05593.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};
Sequence=AAQ88648.1; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AF020502; AAB71413.1; ALT_INIT; mRNA.
EMBL; AF014794; AAC05593.1; ALT_INIT; mRNA.
EMBL; AF012629; AAB67110.1; -; mRNA.
EMBL; AF012536; AAB67104.1; -; mRNA.
EMBL; AF016267; AAB81181.1; -; mRNA.
EMBL; AF033854; AAB87506.1; -; mRNA.
EMBL; AY358281; AAQ88648.1; ALT_INIT; mRNA.
EMBL; CR541857; CAG46655.1; -; mRNA.
EMBL; AC107959; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC125041; AAI25042.1; -; mRNA.
EMBL; BC125042; AAI25043.1; -; mRNA.
CCDS; CCDS6037.1; -.
RefSeq; NP_003832.2; NM_003841.4.
UniGene; Hs.655801; -.
ProteinModelPortal; O14798; -.
SMR; O14798; -.
BioGrid; 114322; 63.
DIP; DIP-6242N; -.
IntAct; O14798; 11.
STRING; 9606.ENSP00000349324; -.
iPTMnet; O14798; -.
PhosphoSitePlus; O14798; -.
BioMuta; TNFRSF10C; -.
PaxDb; O14798; -.
PeptideAtlas; O14798; -.
PRIDE; O14798; -.
Ensembl; ENST00000356864; ENSP00000349324; ENSG00000173535.
GeneID; 8794; -.
KEGG; hsa:8794; -.
UCSC; uc003xcy.4; human.
CTD; 8794; -.
DisGeNET; 8794; -.
EuPathDB; HostDB:ENSG00000173535.13; -.
GeneCards; TNFRSF10C; -.
HGNC; HGNC:11906; TNFRSF10C.
HPA; CAB025635; -.
MIM; 603613; gene.
neXtProt; NX_O14798; -.
OpenTargets; ENSG00000173535; -.
PharmGKB; PA36599; -.
eggNOG; ENOG410JFKD; Eukaryota.
eggNOG; ENOG410Y7QF; LUCA.
GeneTree; ENSGT00730000110985; -.
HOVERGEN; HBG061470; -.
InParanoid; O14798; -.
KO; K04722; -.
OMA; HYLSCTI; -.
OrthoDB; EOG091G0MOV; -.
PhylomeDB; O14798; -.
TreeFam; TF333916; -.
Reactome; R-HSA-6803211; TP53 Regulates Transcription of Death Receptors and Ligands.
SIGNOR; O14798; -.
ChiTaRS; TNFRSF10C; human.
GeneWiki; TNFRSF10C; -.
GenomeRNAi; 8794; -.
PRO; PR:O14798; -.
Proteomes; UP000005640; Chromosome 8.
Bgee; ENSG00000173535; -.
CleanEx; HS_TNFRSF10C; -.
ExpressionAtlas; O14798; baseline and differential.
Genevisible; O14798; HS.
GO; GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
GO; GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
GO; GO:0005886; C:plasma membrane; TAS:Reactome.
GO; GO:0045569; F:TRAIL binding; IEA:InterPro.
GO; GO:0004888; F:transmembrane signaling receptor activity; TAS:ProtInc.
GO; GO:0005031; F:tumor necrosis factor-activated receptor activity; IBA:GO_Central.
GO; GO:0097190; P:apoptotic signaling pathway; IBA:GO_Central.
GO; GO:0006955; P:immune response; IBA:GO_Central.
GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
GO; GO:0007275; P:multicellular organism development; IBA:GO_Central.
GO; GO:0043154; P:negative regulation of cysteine-type endopeptidase activity involved in apoptotic process; IBA:GO_Central.
GO; GO:0042981; P:regulation of apoptotic process; TAS:Reactome.
GO; GO:0042127; P:regulation of cell proliferation; IBA:GO_Central.
GO; GO:0032496; P:response to lipopolysaccharide; IBA:GO_Central.
GO; GO:0007165; P:signal transduction; TAS:ProtInc.
CDD; cd10580; TNFRSF10; 1.
InterPro; IPR001368; TNFR/NGFR_Cys_rich_reg.
InterPro; IPR020465; TNFR_10.
InterPro; IPR034024; TNFRSF10_N.
Pfam; PF00020; TNFR_c6; 2.
PRINTS; PR01956; TNFACTORR10.
SMART; SM00208; TNFR; 2.
PROSITE; PS00652; TNFR_NGFR_1; 2.
PROSITE; PS50050; TNFR_NGFR_2; 2.
1: Evidence at protein level;
Apoptosis; Cell membrane; Complete proteome;
Direct protein sequencing; Disulfide bond; Glycoprotein; GPI-anchor;
Lipoprotein; Membrane; Polymorphism; Receptor; Reference proteome;
Repeat; Signal.
SIGNAL 1 25 {ECO:0000269|PubMed:15340161,
ECO:0000269|PubMed:9242611}.
CHAIN 26 236 Tumor necrosis factor receptor
superfamily member 10C.
/FTId=PRO_0000034582.
PROPEP 237 259 Removed in mature form. {ECO:0000255}.
/FTId=PRO_0000034583.
REPEAT 29 66 TNFR-Cys 1.
REPEAT 69 109 TNFR-Cys 2.
REPEAT 110 149 TNFR-Cys 3.
REPEAT 162 176 TAPE 1.
REPEAT 177 191 TAPE 2.
REPEAT 192 206 TAPE 3.
REPEAT 207 221 TAPE 4.
REPEAT 222 236 TAPE 5.
LIPID 236 236 GPI-anchor amidated alanine.
{ECO:0000255}.
CARBOHYD 77 77 N-linked (GlcNAc...) (high mannose)
asparagine. {ECO:0000255}.
CARBOHYD 140 140 N-linked (GlcNAc...) (high mannose)
asparagine. {ECO:0000255}.
CARBOHYD 156 156 N-linked (GlcNAc...) (high mannose)
asparagine. {ECO:0000255}.
DISULFID 53 66 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 69 85 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 88 101 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 91 109 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 111 125 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 128 141 {ECO:0000255|PROSITE-ProRule:PRU00206}.
DISULFID 131 149 {ECO:0000255|PROSITE-ProRule:PRU00206}.
VARIANT 199 199 T -> N (in dbSNP:rs12550828).
/FTId=VAR_046534.
VARIANT 229 229 I -> T (in dbSNP:rs9644063).
{ECO:0000269|PubMed:12975309,
ECO:0000269|PubMed:15489334,
ECO:0000269|PubMed:9242610,
ECO:0000269|PubMed:9242611,
ECO:0000269|PubMed:9314565,
ECO:0000269|PubMed:9325248,
ECO:0000269|PubMed:9373179,
ECO:0000269|PubMed:9551946}.
/FTId=VAR_046535.
CONFLICT 119 119 E -> V (in Ref. 5; AAB81181).
{ECO:0000305}.
SEQUENCE 259 AA; 27407 MW; 40CBF7FCEEAE4C69 CRC64;
MARIPKTLKF VVVIVAVLLP VLAYSATTAR QEEVPQQTVA PQQQRHSFKG EECPAGSHRS
EHTGACNPCT EGVDYTNASN NEPSCFPCTV CKSDQKHKSS CTMTRDTVCQ CKEGTFRNEN
SPEMCRKCSR CPSGEVQVSN CTSWDDIQCV EEFGANATVE TPAAEETMNT SPGTPAPAAE
ETMNTSPGTP APAAEETMTT SPGTPAPAAE ETMTTSPGTP APAAEETMIT SPGTPASSHY
LSCTIVGIIV LIVLLIVFV


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