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Ubiquitin-like superfamily protein

 F4ITP6_ARATH            Unreviewed;       242 AA.
F4ITP6;
28-JUN-2011, integrated into UniProtKB/TrEMBL.
28-JUN-2011, sequence version 1.
05-DEC-2018, entry version 51.
SubName: Full=Ubiquitin-like superfamily protein {ECO:0000313|EMBL:AEC08672.1};
OrderedLocusNames=At2g32350 {ECO:0000313|Araport:AT2G32350,
ECO:0000313|EMBL:AEC08672.1};
ORFNames=T32F6.13 {ECO:0000313|EMBL:AEC08672.1},
T32F6_13 {ECO:0000313|EMBL:AEC08672.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702 {ECO:0000313|EMBL:AEC08672.1, ECO:0000313|Proteomes:UP000006548};
[1] {ECO:0000313|EMBL:AEC08672.1, ECO:0000313|Proteomes:UP000006548}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
PubMed=10617197; DOI=10.1038/45471;
Lin X., Kaul S., Rounsley S., Shea T.P., Benito M.I., Town C.D.,
Fujii C.Y., Mason T., Bowman C.L., Barnstead M., Feldblyum T.V.,
Buell C.R., Ketchum K.A., Lee J., Ronning C.M., Koo H.L., Moffat K.S.,
Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J.,
Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M.,
Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O.,
Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.;
"Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana.";
Nature 402:761-768(1999).
[2] {ECO:0000213|PDB:2N4F}
STRUCTURE BY NMR OF 69-153.
PubMed=26121406; DOI=10.1038/nmeth.3455;
Tang Y., Huang Y.J., Hopf T.A., Sander C., Marks D.S.,
Montelione G.T.;
"Protein structure determination by combining sparse NMR data with
evolutionary couplings.";
Nat. Methods 12:751-754(2015).
[3] {ECO:0000313|Proteomes:UP000006548}
GENOME REANNOTATION.
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
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EMBL; CP002685; AEC08672.1; -; Genomic_DNA.
RefSeq; NP_180794.2; NM_128794.2.
UniGene; At.49364; -.
PDB; 2N4F; NMR; -; A=69-153.
ProteinModelPortal; F4ITP6; -.
SMR; F4ITP6; -.
STRING; 3702.AT2G32350.1; -.
PaxDb; F4ITP6; -.
EnsemblPlants; AT2G32350.1; AT2G32350.1; AT2G32350.
GeneID; 817796; -.
Gramene; AT2G32350.1; AT2G32350.1; AT2G32350.
KEGG; ath:AT2G32350; -.
Araport; AT2G32350; -.
TAIR; locus:2062566; AT2G32350.
eggNOG; KOG0001; Eukaryota.
eggNOG; COG5272; LUCA.
InParanoid; F4ITP6; -.
KO; K08770; -.
OMA; FSEIIVF; -.
OrthoDB; EOG09360NL6; -.
Proteomes; UP000006548; Chromosome 2.
ExpressionAtlas; F4ITP6; baseline and differential.
InterPro; IPR029071; Ubiquitin-like_domsf.
InterPro; IPR000626; Ubiquitin_dom.
Pfam; PF00240; ubiquitin; 2.
SMART; SM00213; UBQ; 2.
SUPFAM; SSF54236; SSF54236; 3.
PROSITE; PS50053; UBIQUITIN_2; 2.
1: Evidence at protein level;
3D-structure {ECO:0000213|PDB:2N4F};
Complete proteome {ECO:0000313|Proteomes:UP000006548};
Reference proteome {ECO:0000313|Proteomes:UP000006548}.
DOMAIN 75 146 Ubiquitin-like.
{ECO:0000259|PROSITE:PS50053}.
DOMAIN 160 232 Ubiquitin-like.
{ECO:0000259|PROSITE:PS50053}.
SEQUENCE 242 AA; 27736 MW; 98415B705182B4A9 CRC64;
MEISEQESVL EVKKRLGQFL QIPTSSITLF VSCWELIDGL DIEDYPIISH GTRIDLTVTP
LFTAPSFIHA AVRKIHVTVK FPSKQFTVEV DRTETVSSLK DKIHIVENTP IKRMQLYYSG
IELADDYRNL NEYGITEFSE IVVFLKSINR AKDVAPVRKL CFLVQTSSSL FNGARIPVEI
KDTCTISEMR EGLQANKTLP RDEYIFVHKQ RIMRENCSLR WHGVENGDTL FVFKGSISRE
GF


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