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Ultra-violet sensitive visual pigment (Fragment)

 A0A125RY41_9SAUR        Unreviewed;       329 AA.
A0A125RY41;
13-APR-2016, integrated into UniProtKB/TrEMBL.
13-APR-2016, sequence version 1.
08-JUN-2016, entry version 3.
SubName: Full=Ultra-violet sensitive visual pigment {ECO:0000313|EMBL:AMD82565.1};
Flags: Fragment;
Name=OPN1SW {ECO:0000313|EMBL:AMD82565.1};
Phyllorhynchus decurtatus.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae;
Phyllorhynchus.
NCBI_TaxID=186559 {ECO:0000313|EMBL:AMD82565.1};
[1] {ECO:0000313|EMBL:AMD82565.1}
NUCLEOTIDE SEQUENCE.
PubMed=26817768;
Simoes B.F., Sampaio F.L., Loew E.R., Sanders K.L., Fisher R.N.,
Hart N.S., Hunt D.M., Partridge J.C., Gower D.J.;
"Multiple rod-cone and cone-rod photoreceptor transmutations in
snakes: evidence from visual opsin gene expression.";
Proc. R. Soc. B 283:20152624-20152624(2016).
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU004951};
Multi-pass membrane protein {ECO:0000256|RuleBase:RU004951}.
-!- SIMILARITY: Belongs to the G-protein coupled receptor 1 family.
Opsin subfamily. {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00536236}.
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EMBL; KU323996; AMD82565.1; -; Genomic_DNA.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.
GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
GO; GO:0007602; P:phototransduction; IEA:UniProtKB-KW.
GO; GO:0018298; P:protein-chromophore linkage; IEA:UniProtKB-KW.
GO; GO:0007601; P:visual perception; IEA:InterPro.
InterPro; IPR000276; GPCR_Rhodpsn.
InterPro; IPR017452; GPCR_Rhodpsn_7TM.
InterPro; IPR001760; Opsin.
InterPro; IPR001521; Opsin_blue.
InterPro; IPR027430; Retinal_BS.
Pfam; PF00001; 7tm_1; 1.
PRINTS; PR00237; GPCRRHODOPSN.
PRINTS; PR00238; OPSIN.
PRINTS; PR00574; OPSINBLUE.
PROSITE; PS00237; G_PROTEIN_RECEP_F1_1; 1.
PROSITE; PS50262; G_PROTEIN_RECEP_F1_2; 1.
PROSITE; PS00238; OPSIN; 1.
3: Inferred from homology;
Chromophore {ECO:0000256|RuleBase:RU004951};
Disulfide bond {ECO:0000256|SAAS:SAAS00516288};
G-protein coupled receptor {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495738};
Membrane {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495739};
Photoreceptor protein {ECO:0000256|RuleBase:RU004951};
Receptor {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495738};
Retinal protein {ECO:0000256|RuleBase:RU004951};
Sensory transduction {ECO:0000256|RuleBase:RU004951};
Transducer {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495738};
Transmembrane {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495739};
Transmembrane helix {ECO:0000256|RuleBase:RU004951,
ECO:0000256|SAAS:SAAS00495739}.
TRANSMEM 29 50 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 62 82 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 102 120 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 140 160 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 189 211 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 241 263 Helical. {ECO:0000256|RuleBase:RU004951}.
TRANSMEM 275 296 Helical. {ECO:0000256|RuleBase:RU004951}.
DOMAIN 41 293 G_PROTEIN_RECEP_F1_2.
{ECO:0000259|PROSITE:PS50262}.
NON_TER 1 1 {ECO:0000313|EMBL:AMD82565.1}.
NON_TER 329 329 {ECO:0000313|EMBL:AMD82565.1}.
SEQUENCE 329 AA; 37206 MW; C8B0FC446B284B05 CRC64;
LFENISSVKP WDGPQYHIAP MWAFHFQTIF MGLVFFAGTP LNTIILFVTI KYKKLRQPLN
XILVNISFAG LIFCVFAVFV VFLSSMQGYF FLGRQVCKME AFLGSVAGLV TGWSLAFLAF
ERYIVICKPL GNFRFNSKHA LVVVVTTWII GIGVSVPPFF GWSRFLPEGL QCSCGPDWYT
VGTKYKSEYY SWFLFIFCFL IPLTLIIYCY ARLLGALRAV AAQQQESATT QKAEREVSRM
VVVMVGSFCI CYIPYAALAM YMVNNPQHGL DLRLVTIPAF FSKSSCVYNP IIYCFMNKQF
RGCIMETVCG KPITDDSEVV SQKTEVSSV


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