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Uncharacterized protein

 E1BPU0_BOVIN            Unreviewed;      2527 AA.
E1BPU0;
02-NOV-2010, integrated into UniProtKB/TrEMBL.
16-NOV-2011, sequence version 2.
20-JUN-2018, entry version 73.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSBTAP00000053353};
Name=LRRK2 {ECO:0000313|Ensembl:ENSBTAP00000053353,
ECO:0000313|VGNC:VGNC:31038};
Bos taurus (Bovine).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bos.
NCBI_TaxID=9913 {ECO:0000313|Ensembl:ENSBTAP00000053353, ECO:0000313|Proteomes:UP000009136};
[1] {ECO:0000313|Ensembl:ENSBTAP00000053353, ECO:0000313|Proteomes:UP000009136}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000053353,
ECO:0000313|Proteomes:UP000009136};
PubMed=19393038; DOI=10.1186/gb-2009-10-4-r42;
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C.,
Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S.,
Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.;
"A whole-genome assembly of the domestic cow, Bos taurus.";
Genome Biol. 10:R42.01-R42.10(2009).
[2] {ECO:0000313|Ensembl:ENSBTAP00000053353}
IDENTIFICATION.
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000053353};
Ensembl;
Submitted (MAR-2016) to UniProtKB.
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EMBL; DAAA02013139; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; DAAA02013140; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; DAAA02013141; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; XP_010803364.1; XM_010805062.2.
STRING; 9913.ENSBTAP00000053353; -.
PaxDb; E1BPU0; -.
Ensembl; ENSBTAT00000061570; ENSBTAP00000053353; ENSBTAG00000016260.
GeneID; 535652; -.
CTD; 120892; -.
VGNC; VGNC:31038; LRRK2.
eggNOG; ENOG410IRBK; Eukaryota.
eggNOG; KOG0192; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; E1BPU0; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Reactome; R-BTA-8857538; PTK6 promotes HIF1A stabilization.
Proteomes; UP000009136; Chromosome 5.
Bgee; ENSBTAG00000016260; -.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IBA:GO_Central.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IBA:GO_Central.
GO; GO:0005768; C:endosome; IBA:GO_Central.
GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005764; C:lysosome; IBA:GO_Central.
GO; GO:0045121; C:membrane raft; IBA:GO_Central.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl.
GO; GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
GO; GO:0031966; C:mitochondrial membrane; IBA:GO_Central.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0043005; C:neuron projection; IBA:GO_Central.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
GO; GO:0098794; C:postsynapse; IEA:GOC.
GO; GO:1990904; C:ribonucleoprotein complex; IEA:Ensembl.
GO; GO:0008021; C:synaptic vesicle; IEA:Ensembl.
GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:1904713; F:beta-catenin destruction complex binding; IEA:Ensembl.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
GO; GO:0017048; F:Rho GTPase binding; IBA:GO_Central.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IBA:GO_Central.
GO; GO:0034613; P:cellular protein localization; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0060079; P:excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0035641; P:locomotory exploration behavior; IEA:Ensembl.
GO; GO:0007005; P:mitochondrion organization; IBA:GO_Central.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IBA:GO_Central.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0090394; P:negative regulation of excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0001933; P:negative regulation of protein phosphorylation; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:1901727; P:positive regulation of histone deacetylase activity; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IBA:GO_Central.
GO; GO:0035564; P:regulation of kidney size; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:0010738; P:regulation of protein kinase A signaling; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IBA:GO_Central.
GO; GO:0051966; P:regulation of synaptic transmission, glutamatergic; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:1902803; P:regulation of synaptic vesicle transport; IBA:GO_Central.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 2.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 2.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 2.
SUPFAM; SSF50978; SSF50978; 2.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 12.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000009136};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000009136};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1328 1511 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1879 2138 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 320 347 {ECO:0000256|SAM:Coils}.
COILED 2504 2524 {ECO:0000256|SAM:Coils}.
SEQUENCE 2527 AA; 286147 MW; 409794C3D9E2FE4B CRC64;
MASGSCQGCE EEDEESLKKL IVRLNNVQEG KQIETLVQIL EDMLVFTYAD HASKLFQDKN
VHVPLLIVLD SYMRVASVQQ VGWSLLCKLI EICPNTMQSL MGPHDIGHDW EVLGVHQLIL
KTLTVHNASV NLTTVGLKAL DLLLTSGKIT LLILDEENDI FLLIFDAMRT FSASDEVQKL
GCKVLHVLFE RVSEEQLTEF VENKDYMILL SALKNFEDEE EIVLHVLHCL HSLAIPCSNV
EVLMSGNVRC YNIVVEAMKA FPISEKIQEV SCCLLHRLTL GNFFNILVLN EVHEFVVKAV
QQYSENAVLQ IAALSCLALL TETIFLNQDL EEKNENQEND DDEEDKLFWL EACYKALTWH
RKNKHVQEAA CWALNNLLMY QNSLHEKIGD EDGQFPAHRE VMLSMLMHSS SKEVFQASAN
ALSTLLEQNV NFRKILLSKG IYLNVLELMQ KHMHSPEVAE SGCKMLNHLF EESSTSLDTM
AAVVPKIITV MKSHETSLSV QLEALRAMLH FIVPGIPEEY REDTEYQHKL NMIEKQCFRN
DIHKLVLAAL NRFIGNPGIQ KCGLKVISSI IHFPDALEVL SLEGAIDSVL HTLQMYPDDQ
EIQCLGLSLI GCLITKKNLC MGTGNLLAKI LISTLQRFKD IGEVQIKGFQ TVLTMLELSV
SFSKLLVHYS FDSVIFHQLS SSITEQKDQQ FLNLCCKCFA KLAIDNELKS VMLEKACDQN
NSIMVECLLL LGADANRAKE ATSLICQVCE KASSPKLVEL LLNSGSREQD VRKALTISIG
KGNSQIISLL LRRLALDLAN NSICLGGFCM GKIDPSWLGP LFPDKTSYLR KETNIGSTLA
RMVLRYQMKS SVEEEAGSGS NGNFSEEMVD KFDEWTFVPE SYVDSVFGQS DDLDSEGSEG
SFLVKTKSNS ISVGEFYQDP ALQRCSPNLQ RHSSSLGPIF DHEDLIKRKR KIFSSDDSLR
ASKFQSHMKH SESMSSLPSE REYITSLDLS ANELKDVDAL SQNSCISGHL EHLEKLELHQ
NALTSFPQQL CETLKCLTHL DLHSNKFTSL PTYLLKMNCI ANLDVSRNDI GPSVVLDPAV
KCPTLKQFNL SYNQISSLPA NLGDVVEKLE QLILEGNKIS EICSPLSLKE LKILNLSKNH
ISSLSEDFLE TCPKVEILSA KMNFLATMPF LPSSITSLKL SQNRFTCVPE AILHLPHLRS
LDMSSNDIRY LPGPVHWRSL NLRELLFSHN QISILDLSEK ACAWSRIEKL HLSHNKLKEI
PPEIGCLENL TSLDVSYNLE LRSFPNEMGK LSKIWDLPLD ELHLNFDFKH VGCKAKDIIR
FLQQRLKKAV PYNRMKLMIV GNTGSGKTTL LQQLMKIKKS DLGMQGATVG IDVKDWPIQI
RGKGKKDLIL NVWDFAGREE FYSTHPHFMT QRALYLAVYD LSKGQAEVDA MKPWLFNIKA
RASSSPVILV GTHLDVTDEK QRKACISKIT KELLNKRGFP AIRDYHFVNA TEESDALAKL
RKTIINESLN FKIRDQPVVG QLIPDCYVEL EKIILSERKN VPIEFPVIDR KRLLQLVREH
QLQLDENELP HAVHFLNESG VLLHFQDPAL QLSDLYFVEP KWLCKVMAQI LTVKVEGFPK
HPKGIISRRD VEKFLSKKKR FPKNYMAQYF KLLEKFQIAL PIGEEYLLVP SSLSDHRPVI
ELPHCENSEI IIRLYEMPYF PMGFWSRLIN RLLEISPYML SGRERALRPN RMYWRQGIYL
NWSPEAYCLV GSEVLDHHPE SFLKITVPSC RKGCILLGQV VDHIDSLMEE WFPGLLEIDI
CGEGETLLKK WALYSFNDGE EHQKILLDHL MKKAEEGDLL VNPDQPRLTI PISQIAPDLI
LADLPRNIML NNDELEFEQA PEFLLGDGSF GSVYRAAYEG EEVAVKIFNK HTSLRLLRQE
LVVLCHLHHP SLISLLAAGI RPRMLVMELA SKGSLDRLLQ QDKTSLTRTL QHRIVLHVAD
GLRYLHSAMI IYRDLKPHNV LLFTLYPNAA IIAKIADYGI AQYCCRMGIK TSEGTPGFRA
PEVARGNVIY NQQADVYSFG LLLYDILTTG GRIAEGLKFP NEFDELAIQG KLPDPVKEYG
CAPWPMVEKL IKKCLKENPQ ERPTSAQVFD ILNSAELICL MRRISIPKSF TVECMVATNH
NSKNVRIWLG CGHTDKGQLS FLDLNTERYT SEEVTDSRIL CLALVYLPVE KESWIVSGTQ
SGTLLVINTE DGRKRHTLEK MTDSVTCLYC NSFSKQSKQK TFLLVGTADG NLAIFEDKSV
KCKGATPLKI LNIGNVSTPL MCLSESVNLT EKNIMWGGCG TKVFSFSDDF TIQKLIETRT
NQRFSYASFC DSNIIAVVVD TALYVAKKNS PFVEVWDKKT EKLCELIDCV HFLKEELVRV
SKELKHKMSY SGRVKTLCLQ KNTALWIGTG GGHILLLDLS TRRIIRIIHN FCDSVRVMMT
AQLGSLKNVM LVLGYNRKSA EGTQHQKEIQ SCLSVWDINL PHEVQNLEKH IEVRKELAEK
MRRTSVE


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