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Unplaced genomic scaffold CY34scaffold_52, whole genome shotgun sequence

 A0A0D0AST5_9HOMO        Unreviewed;       600 AA.
A0A0D0AST5;
29-APR-2015, integrated into UniProtKB/TrEMBL.
29-APR-2015, sequence version 1.
27-SEP-2017, entry version 13.
SubName: Full=Unplaced genomic scaffold CY34scaffold_52, whole genome shotgun sequence {ECO:0000313|EMBL:KIK44816.1};
ORFNames=CY34DRAFT_802279 {ECO:0000313|EMBL:KIK44816.1};
Suillus luteus UH-Slu-Lm8-n1.
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
Agaricomycetes; Agaricomycetidae; Boletales; Suillineae; Suillaceae;
Suillus.
NCBI_TaxID=930992 {ECO:0000313|EMBL:KIK44816.1, ECO:0000313|Proteomes:UP000054485};
[1] {ECO:0000313|EMBL:KIK44816.1, ECO:0000313|Proteomes:UP000054485}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=UH-Slu-Lm8-n1 {ECO:0000313|EMBL:KIK44816.1,
ECO:0000313|Proteomes:UP000054485};
DOE Joint Genome Institute;
Kuo A., Ruytinx J., Rineau F., Colpaert J., Kohler A., Nagy L.G.,
Floudas D., Copeland A., Barry K.W., Cichocki N., Veneault-Fourrey C.,
LaButti K., Lindquist E.A., Lipzen A., Lundell T., Morin E., Murat C.,
Sun H., Tunlid A., Henrissat B., Grigoriev I.V., Hibbett D.S.,
Martin F., Nordberg H.P., Cantor M.N., Hua S.X.;
Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|Proteomes:UP000054485}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=UH-Slu-Lm8-n1 {ECO:0000313|Proteomes:UP000054485};
DOE Joint Genome Institute;
Mycorrhizal Genomics Consortium;
Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A.,
Lipzen A., Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H.,
Tunlid A., Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
"Evolutionary Origins and Diversification of the Mycorrhizal
Mutualists.";
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
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EMBL; KN835183; KIK44816.1; -; Genomic_DNA.
EnsemblFungi; KIK44816; KIK44816; CY34DRAFT_802279.
Proteomes; UP000054485; Unassembled WGS sequence.
GO; GO:0000781; C:chromosome, telomeric region; IEA:EnsemblFungi.
GO; GO:0000794; C:condensed nuclear chromosome; IEA:EnsemblFungi.
GO; GO:0005829; C:cytosol; IEA:EnsemblFungi.
GO; GO:0005662; C:DNA replication factor A complex; IEA:EnsemblFungi.
GO; GO:0003690; F:double-stranded DNA binding; IEA:EnsemblFungi.
GO; GO:0043565; F:sequence-specific DNA binding; IEA:EnsemblFungi.
GO; GO:0003697; F:single-stranded DNA binding; IEA:EnsemblFungi.
GO; GO:0006265; P:DNA topological change; IEA:EnsemblFungi.
GO; GO:0006268; P:DNA unwinding involved in DNA replication; IEA:EnsemblFungi.
GO; GO:0000724; P:double-strand break repair via homologous recombination; IEA:EnsemblFungi.
GO; GO:0045184; P:establishment of protein localization; IEA:EnsemblFungi.
GO; GO:0030491; P:heteroduplex formation; IEA:EnsemblFungi.
GO; GO:0006289; P:nucleotide-excision repair; IEA:EnsemblFungi.
GO; GO:0016567; P:protein ubiquitination; IEA:EnsemblFungi.
GO; GO:0007131; P:reciprocal meiotic recombination; IEA:EnsemblFungi.
GO; GO:0043934; P:sporulation; IEA:EnsemblFungi.
GO; GO:0000722; P:telomere maintenance via recombination; IEA:EnsemblFungi.
GO; GO:0007004; P:telomere maintenance via telomerase; IEA:EnsemblFungi.
CDD; cd04476; RPA1_DBD_C; 1.
CDD; cd04477; RPA1N; 1.
InterPro; IPR012340; NA-bd_OB-fold.
InterPro; IPR004365; NA-bd_OB_tRNA.
InterPro; IPR013955; Rep_factor-A_C.
InterPro; IPR007199; Rep_factor-A_N.
InterPro; IPR031657; REPA_OB_2.
InterPro; IPR004591; Rfa1.
Pfam; PF04057; Rep-A_N; 1.
Pfam; PF08646; Rep_fac-A_C; 1.
Pfam; PF16900; REPA_OB_2; 1.
Pfam; PF01336; tRNA_anti-codon; 1.
SUPFAM; SSF50249; SSF50249; 4.
TIGRFAMs; TIGR00617; rpa1; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000054485};
Reference proteome {ECO:0000313|Proteomes:UP000054485}.
DOMAIN 26 109 Rep-A_N. {ECO:0000259|Pfam:PF04057}.
DOMAIN 180 265 OB. {ECO:0000259|Pfam:PF01336}.
DOMAIN 289 384 REPA_OB_2. {ECO:0000259|Pfam:PF16900}.
DOMAIN 446 590 Rep_fac-A_C. {ECO:0000259|Pfam:PF08646}.
SEQUENCE 600 AA; 66477 MW; 5F027C2345975C60 CRC64;
MSQLSSGICR RLNEAPQEEI DQLASGHTVQ LLSIKKVAPT PNSTTATDRF RIIISDGVHF
VQAMLATQLN DLVANGDINK NTVVIIDKLA CNFVQDKRLI IILDLHVVSR DEEKIGAPTA
PPSTQDAPAP IALESASSSV TATSSSTTPA KQTQPRTGPS GRGGRSVYPI EGLSPYQNNW
TIKARVTQKS DIRTWSNQRG EGKLFNVTLM DESGEIRGTG FNSVVDELYD KFEEGKVYYI
SKARVNLAKK KFSNLQNDYE LSLEKSTEVE ECLETTSVPK MKYNFVELSS LEKLEKDNTC
DVIGVVKEVG PLSEITSKAT NRTIPKRDLT IVDMSQYSVR LTLWGKQAEQ FSADDLPVIA
FKGVKVGDFG GRTLSMVSSS IMTVSPDIEE AHLLRGWYDG IGTEKNFQSH TSGSSGASFG
GFNRNEMRHL SDVKESQLGM SDKADFFSTR ATIMHIKSES ISYPACPTQG CNKKVVDLGS
GWKCEKCDKT FERPEYRYIM SMAVADWSGQ AWLQGFNEAG LAVFGKTADE VHEIKERNEA
EYNALMAQAS GVTFNFSCRA KQDTYNDQTR VRYGISRITS LDYREEAKHL VELLKSPWAQ


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