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Use1 protein (Fragment)

 B0BNG6_RAT              Unreviewed;       264 AA.
B0BNG6;
26-FEB-2008, integrated into UniProtKB/TrEMBL.
26-FEB-2008, sequence version 1.
22-NOV-2017, entry version 61.
SubName: Full=Use1 protein {ECO:0000313|EMBL:AAI58813.1};
Flags: Fragment;
Name=Use1 {ECO:0000313|EMBL:AAI58813.1, ECO:0000313|RGD:1306660};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:AAI58813.1};
[1] {ECO:0000313|EMBL:AAI58813.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Liver {ECO:0000313|EMBL:AAI58813.1};
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H.,
Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M.,
Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S.,
Feolo M., Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F.,
Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J.,
Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N.,
Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B.,
Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B.,
Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S.,
Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R.,
Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L.,
Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E.,
Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J.,
Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D.,
Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G.,
Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J.,
Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L.,
Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D.,
Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A.,
Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S.,
Makowski K.A., Bosak S., Malek J.;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
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EMBL; BC158812; AAI58813.1; -; mRNA.
RefSeq; NP_001162571.1; NM_001169100.1.
UniGene; Rn.2957; -.
PaxDb; B0BNG6; -.
GeneID; 290627; -.
KEGG; rno:290627; -.
CTD; 55850; -.
RGD; 1306660; Use1.
eggNOG; KOG2678; Eukaryota.
eggNOG; ENOG410ZN7C; LUCA.
HOGENOM; HOG000007677; -.
HOVERGEN; HBG079328; -.
KO; K08507; -.
PhylomeDB; B0BNG6; -.
Genevisible; B0BNG6; RN.
GO; GO:0005783; C:endoplasmic reticulum; ISO:RGD.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0007029; P:endoplasmic reticulum organization; ISO:RGD.
GO; GO:0071786; P:endoplasmic reticulum tubular network organization; ISO:RGD.
GO; GO:0060628; P:regulation of ER to Golgi vesicle-mediated transport; ISO:RGD.
InterPro; IPR019150; Vesicle_transport_protein_Use1.
PANTHER; PTHR13050; PTHR13050; 1.
Pfam; PF09753; Use1; 1.
2: Evidence at transcript level;
Coiled coil {ECO:0000256|SAM:Coils};
Membrane {ECO:0000256|SAM:Phobius};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 237 257 Helical. {ECO:0000256|SAM:Phobius}.
COILED 203 230 {ECO:0000256|SAM:Coils}.
NON_TER 1 1 {ECO:0000313|EMBL:AAI58813.1}.
SEQUENCE 264 AA; 29926 MW; DE5E87A055ECF3EE CRC64;
ACHRPLATSR LELNLVRLLC RCESMAAEKR EPDEWRLEKY VGALEDMLQA LKVQASKPAS
EVISEYSRKV DFLKGMLQAE KLTSSSEKAL ANQFLAPGRV PTTAKERVPA TKTVHLQSRA
RYTSEMRSEL LGTESSGELE ADMRKRVVKG PRPADEKQSA SELDLVLQRH QGLQEKLAEE
MLGLARSLKT NTLAAQSVIK KDNQTLSHSL KMADQNLEKL KLESERLEQH AQKSVNWLLW
AMLIVVCFVF ISMILFIRIM PRLK


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