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Vacuolar protein sorting-associated protein 2 homolog 1 (AtVPS2-1) (Charged multivesicular body protein 2 homolog 1) (ESCRT-III complex subunit VPS2 homolog 1) (SNF7-like protein)

 VPS2A_ARATH             Reviewed;         225 AA.
Q9SKI2; Q701A4; Q701B3; Q701B7; Q701C5; Q701E0; Q701E1; Q701E3;
Q701F9; Q701G8; Q701J8; Q8L915;
14-APR-2009, integrated into UniProtKB/Swiss-Prot.
01-JUN-2002, sequence version 2.
23-MAY-2018, entry version 96.
RecName: Full=Vacuolar protein sorting-associated protein 2 homolog 1;
Short=AtVPS2-1;
AltName: Full=Charged multivesicular body protein 2 homolog 1;
AltName: Full=ESCRT-III complex subunit VPS2 homolog 1;
AltName: Full=SNF7-like protein;
Name=VPS2.1; Synonyms=CHMP2-1, SLP; OrderedLocusNames=At2g06530;
ORFNames=T12H3.8;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617197; DOI=10.1038/45471;
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D.,
Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V.,
Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L.,
Moffat K.S., Cronin L.A., Shen M., Pai G., Van Aken S., Umayam L.,
Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H.,
Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D.,
Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M.,
Venter J.C.;
"Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana.";
Nature 402:761-768(1999).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 15-225.
STRAIN=cv. Ag-0, cv. Alc-0, cv. Bad, cv. Bas-1, cv. Bas-2, cv. Bas-3,
cv. Bij, cv. Bla-1, cv. Blh-1, cv. Br-0, cv. Bs-2, cv. Bur-0,
cv. Can-0, cv. Cha-1, cv. Cha-2, cv. Chi-0, cv. Chi-1, cv. Co,
cv. Columbia, cv. Ct-1, cv. Cvi-0, cv. Dar, cv. Di-1, cv. Dul,
cv. Edi-0, cv. Es-0, cv. Est-0, cv. Flo, cv. Gat, cv. Gie, cv. Gre-0,
cv. Han, cv. HOG, cv. In-0, cv. Ita, cv. K-oz-1, cv. K-oz-2,
cv. K-oz-3, cv. Kaz-1, cv. Kaz-2, cv. Kaz-3, cv. KEN, cv. Kent,
cv. Kga, cv. Kly-1, cv. Kly-2, cv. Kly-3, cv. Kly-4, cv. Kly-6,
cv. Kn-0, cv. Ko-2, cv. Kol, cv. Kon, cv. La-0, cv. Leb-1, cv. Leb-2,
cv. Leb-3, cv. Leb-4, cv. Lim, cv. Lip-0, cv. Lis, cv. Ll-2, cv. Mal,
cv. Mas, cv. Mt-0, cv. Nos-1, cv. Nov-1, cv. Nov-2, cv. Nov-3,
cv. Oph, cv. Oy-0, cv. Pan-1, cv. Par, cv. Per-1, cv. Pog-0,
cv. Rak-1, cv. Rak-2, cv. Rak-3, cv. Rsch-0, cv. Rub, cv. Ryb-0,
cv. Sah-0, cv. Sea-0, cv. Sed, cv. Sev-1, cv. Sha, cv. Sie, cv. Sij-1,
cv. Sij-2, cv. Sij-4, cv. St-0, cv. Stw-0, cv. Tsar, cv. Tsu-0,
cv. Wa-1, cv. Wassilewskija-1, cv. Wil-1, and cv. Wt; TISSUE=Leaf;
PubMed=15045663; DOI=10.1055/s-2004-817837;
Schmuths H., Hoffmann M.H., Bachmann K.;
"Geographic distribution and recombination of genomic fragments on the
short arm of chromosome 2 of Arabidopsis thaliana.";
Plant Biol. 6:128-139(2004).
[6]
IDENTIFICATION, AND NOMENCLATURE.
PubMed=17090720; DOI=10.1242/dev.02654;
Spitzer C., Schellmann S., Sabovljevic A., Shahriari M.,
Keshavaiah C., Bechtold N., Herzog M., Mueller S., Hanisch F.-G.,
Huelskamp M.;
"The Arabidopsis elch mutant reveals functions of an ESCRT component
in cytokinesis.";
Development 133:4679-4689(2006).
[7]
IDENTIFICATION.
PubMed=16488176; DOI=10.1016/j.tplants.2006.01.008;
Winter V., Hauser M.-T.;
"Exploring the ESCRTing machinery in eukaryotes.";
Trends Plant Sci. 11:115-123(2006).
[8]
INTERACTION WITH SKD1.
PubMed=21810997; DOI=10.1105/tpc.111.087254;
Katsiarimpa A., Anzenberger F., Schlager N., Neubert S., Hauser M.T.,
Schwechheimer C., Isono E.;
"The Arabidopsis deubiquitinating enzyme AMSH3 interacts with ESCRT-
III subunits and regulates their localization.";
Plant Cell 23:3026-3040(2011).
[9]
INTERACTION WITH SKD1, AND REVIEW ON ESCRT-III.
PubMed=24812106; DOI=10.1104/pp.114.238378;
Cai Y., Zhuang X., Gao C., Wang X., Jiang L.;
"The Arabidopsis endosomal sorting complex required for transport III
regulates internal vesicle formation of the prevacuolar compartment
and is required for plant development.";
Plant Physiol. 165:1328-1343(2014).
-!- FUNCTION: Component of the ESCRT-III complex, which is required
for multivesicular bodies (MVBs) formation and sorting of
endosomal cargo proteins into MVBs. The ESCRT-III complex is
probably involved in the concentration of MVB cargo (By
similarity). {ECO:0000250}.
-!- SUBUNIT: Component of the endosomal sorting required for transport
complex III (ESCRT-III), composed at least of VPS2, VPS20, VPS24
and VPS32 (By similarity). Interacts with SKD1 (PubMed:21810997,
PubMed:24812106). {ECO:0000250|UniProtKB:O43633,
ECO:0000269|PubMed:21810997, ECO:0000269|PubMed:24812106}.
-!- INTERACTION:
Q0WTY4:VPS2.2; NbExp=3; IntAct=EBI-3865345, EBI-3865323;
Q9FF81:VPS36; NbExp=3; IntAct=EBI-3865345, EBI-3865302;
Q9SCP9:VPS37-1; NbExp=3; IntAct=EBI-3865345, EBI-3865264;
-!- SUBCELLULAR LOCATION: Endosome {ECO:0000250}.
-!- SIMILARITY: Belongs to the SNF7 family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAM67006.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
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EMBL; AC006420; AAD25152.2; -; Genomic_DNA.
EMBL; CP002685; AEC06012.1; -; Genomic_DNA.
EMBL; AY090953; AAM13999.1; -; mRNA.
EMBL; AY088685; AAM67006.1; ALT_INIT; mRNA.
EMBL; AJ628449; CAF31658.1; -; Genomic_DNA.
EMBL; AJ628450; CAF31659.1; -; Genomic_DNA.
EMBL; AJ628451; CAF31660.1; -; Genomic_DNA.
EMBL; AJ628452; CAF31661.1; -; Genomic_DNA.
EMBL; AJ628453; CAF31662.1; -; Genomic_DNA.
EMBL; AJ628454; CAF31663.1; -; Genomic_DNA.
EMBL; AJ628455; CAF31664.1; -; Genomic_DNA.
EMBL; AJ628456; CAF31665.1; -; Genomic_DNA.
EMBL; AJ628457; CAF31666.1; -; Genomic_DNA.
EMBL; AJ628458; CAF31667.1; -; Genomic_DNA.
EMBL; AJ628459; CAF31668.1; -; Genomic_DNA.
EMBL; AJ628460; CAF31669.1; -; Genomic_DNA.
EMBL; AJ628461; CAF31670.1; -; Genomic_DNA.
EMBL; AJ628462; CAF31671.1; -; Genomic_DNA.
EMBL; AJ628463; CAF31672.1; -; Genomic_DNA.
EMBL; AJ628464; CAF31673.1; -; Genomic_DNA.
EMBL; AJ628465; CAF31674.1; -; Genomic_DNA.
EMBL; AJ628466; CAF31675.1; -; Genomic_DNA.
EMBL; AJ628467; CAF31676.1; -; Genomic_DNA.
EMBL; AJ628468; CAF31677.1; -; Genomic_DNA.
EMBL; AJ628469; CAF31678.1; -; Genomic_DNA.
EMBL; AJ628470; CAF31679.1; -; Genomic_DNA.
EMBL; AJ628471; CAF31680.1; -; Genomic_DNA.
EMBL; AJ628472; CAF31681.1; -; Genomic_DNA.
EMBL; AJ628473; CAF31682.1; -; Genomic_DNA.
EMBL; AJ628474; CAF31683.1; -; Genomic_DNA.
EMBL; AJ628475; CAF31684.1; -; Genomic_DNA.
EMBL; AJ628476; CAF31685.1; -; Genomic_DNA.
EMBL; AJ628477; CAF31686.1; -; Genomic_DNA.
EMBL; AJ628478; CAF31687.1; -; Genomic_DNA.
EMBL; AJ628479; CAF31688.1; -; Genomic_DNA.
EMBL; AJ628480; CAF31689.1; -; Genomic_DNA.
EMBL; AJ628481; CAF31690.1; -; Genomic_DNA.
EMBL; AJ628482; CAF31691.1; -; Genomic_DNA.
EMBL; AJ628483; CAF31692.1; -; Genomic_DNA.
EMBL; AJ628484; CAF31693.1; -; Genomic_DNA.
EMBL; AJ628485; CAF31694.1; -; Genomic_DNA.
EMBL; AJ628486; CAF31695.1; -; Genomic_DNA.
EMBL; AJ628487; CAF31696.1; -; Genomic_DNA.
EMBL; AJ628488; CAF31697.1; -; Genomic_DNA.
EMBL; AJ628489; CAF31698.1; -; Genomic_DNA.
EMBL; AJ628490; CAF31699.1; -; Genomic_DNA.
EMBL; AJ628491; CAF31700.1; -; Genomic_DNA.
EMBL; AJ628492; CAF31701.1; -; Genomic_DNA.
EMBL; AJ628493; CAF31702.1; -; Genomic_DNA.
EMBL; AJ628494; CAF31703.1; -; Genomic_DNA.
EMBL; AJ628495; CAF31704.1; -; Genomic_DNA.
EMBL; AJ628496; CAF31705.1; -; Genomic_DNA.
EMBL; AJ628497; CAF31706.1; -; Genomic_DNA.
EMBL; AJ628498; CAF31707.1; -; Genomic_DNA.
EMBL; AJ628499; CAF31708.1; -; Genomic_DNA.
EMBL; AJ628500; CAF31709.1; -; Genomic_DNA.
EMBL; AJ628501; CAF31710.1; -; Genomic_DNA.
EMBL; AJ628502; CAF31711.1; -; Genomic_DNA.
EMBL; AJ628503; CAF31712.1; -; Genomic_DNA.
EMBL; AJ628504; CAF31713.1; -; Genomic_DNA.
EMBL; AJ628505; CAF31714.1; -; Genomic_DNA.
EMBL; AJ628506; CAF31715.1; -; Genomic_DNA.
EMBL; AJ628507; CAF31716.1; -; Genomic_DNA.
EMBL; AJ628508; CAF31717.1; -; Genomic_DNA.
EMBL; AJ628509; CAF31718.1; -; Genomic_DNA.
EMBL; AJ628510; CAF31719.1; -; Genomic_DNA.
EMBL; AJ628511; CAF31720.1; -; Genomic_DNA.
EMBL; AJ628512; CAF31721.1; -; Genomic_DNA.
EMBL; AJ628513; CAF31722.1; -; Genomic_DNA.
EMBL; AJ628514; CAF31723.1; -; Genomic_DNA.
EMBL; AJ628515; CAF31724.1; -; Genomic_DNA.
EMBL; AJ628516; CAF31725.1; -; Genomic_DNA.
EMBL; AJ628517; CAF31726.1; -; Genomic_DNA.
EMBL; AJ628518; CAF31727.1; -; Genomic_DNA.
EMBL; AJ628519; CAF31728.1; -; Genomic_DNA.
EMBL; AJ628520; CAF31729.1; -; Genomic_DNA.
EMBL; AJ628521; CAF31730.1; -; Genomic_DNA.
EMBL; AJ628522; CAF31731.1; -; Genomic_DNA.
EMBL; AJ628523; CAF31732.1; -; Genomic_DNA.
EMBL; AJ628524; CAF31733.1; -; Genomic_DNA.
EMBL; AJ628525; CAF31734.1; -; Genomic_DNA.
EMBL; AJ628526; CAF31735.1; -; Genomic_DNA.
EMBL; AJ628527; CAF31736.1; -; Genomic_DNA.
EMBL; AJ628528; CAF31737.1; -; Genomic_DNA.
EMBL; AJ628529; CAF31738.1; -; Genomic_DNA.
EMBL; AJ628530; CAF31739.1; -; Genomic_DNA.
EMBL; AJ628531; CAF31740.1; -; Genomic_DNA.
EMBL; AJ628532; CAF31741.1; -; Genomic_DNA.
EMBL; AJ628533; CAF31742.1; -; Genomic_DNA.
EMBL; AJ628534; CAF31743.1; -; Genomic_DNA.
EMBL; AJ628535; CAF31744.1; -; Genomic_DNA.
EMBL; AJ628536; CAF31745.1; -; Genomic_DNA.
EMBL; AJ628537; CAF31746.1; -; Genomic_DNA.
EMBL; AJ628538; CAF31747.1; -; Genomic_DNA.
EMBL; AJ628539; CAF31748.1; -; Genomic_DNA.
EMBL; AJ628540; CAF31749.1; -; Genomic_DNA.
EMBL; AJ628541; CAF31750.1; -; Genomic_DNA.
EMBL; AJ628542; CAF31751.1; -; Genomic_DNA.
EMBL; AJ628543; CAF31752.1; -; Genomic_DNA.
EMBL; AJ628544; CAF31753.1; -; Genomic_DNA.
EMBL; AJ628545; CAF31754.1; -; Genomic_DNA.
EMBL; AJ628546; CAF31755.1; -; Genomic_DNA.
PIR; D84478; D84478.
RefSeq; NP_565336.1; NM_126650.4.
UniGene; At.20774; -.
ProteinModelPortal; Q9SKI2; -.
SMR; Q9SKI2; -.
BioGrid; 606; 9.
IntAct; Q9SKI2; 6.
STRING; 3702.AT2G06530.1; -.
PaxDb; Q9SKI2; -.
PRIDE; Q9SKI2; -.
EnsemblPlants; AT2G06530.1; AT2G06530.1; AT2G06530.
GeneID; 815211; -.
Gramene; AT2G06530.1; AT2G06530.1; AT2G06530.
KEGG; ath:AT2G06530; -.
Araport; AT2G06530; -.
TAIR; locus:2054612; AT2G06530.
eggNOG; KOG3230; Eukaryota.
eggNOG; COG5491; LUCA.
InParanoid; Q9SKI2; -.
KO; K12191; -.
OMA; NMNRQLN; -.
OrthoDB; EOG09360PMJ; -.
PhylomeDB; Q9SKI2; -.
Reactome; R-ATH-1632852; Macroautophagy.
Reactome; R-ATH-917729; Endosomal Sorting Complex Required For Transport (ESCRT).
PRO; PR:Q9SKI2; -.
Proteomes; UP000006548; Chromosome 2.
ExpressionAtlas; Q9SKI2; baseline and differential.
Genevisible; Q9SKI2; AT.
GO; GO:0000815; C:ESCRT III complex; ISS:TAIR.
GO; GO:0005770; C:late endosome; IDA:TAIR.
GO; GO:0005771; C:multivesicular body; IDA:TAIR.
GO; GO:0070676; P:intralumenal vesicle formation; IDA:TAIR.
GO; GO:0015031; P:protein transport; IMP:TAIR.
GO; GO:0007034; P:vacuolar transport; IEA:InterPro.
InterPro; IPR005024; Snf7_fam.
Pfam; PF03357; Snf7; 1.
1: Evidence at protein level;
Coiled coil; Complete proteome; Endosome; Protein transport;
Reference proteome; Transport.
CHAIN 1 225 Vacuolar protein sorting-associated
protein 2 homolog 1.
/FTId=PRO_0000368195.
COILED 13 54 {ECO:0000255}.
COMPBIAS 156 162 Poly-Glu.
VARIANT 47 47 E -> Q (in strain: cv. Ag-0).
VARIANT 95 95 K -> R (in strain: cv. Per-1).
VARIANT 143 143 V -> F (in strain: cv. Mal).
VARIANT 182 182 N -> S (in strain: cv. Bas-2).
VARIANT 186 186 G -> S (in strain: cv. Ct-1).
VARIANT 192 192 A -> T (in strain: cv. Tsar).
VARIANT 193 193 A -> T (in strain: cv. Edi-0, cv. Lip-0,
cv. Sie and cv. Bur-0).
VARIANT 198 198 V -> G (in strain: cv. Mas).
VARIANT 198 198 V -> I (in strain: cv. Dul).
SEQUENCE 225 AA; 25292 MW; 7068FB91553C1828 CRC64;
MMNSIFGKRK TPAELLRENK RMLDKSIREI ERERQGLQTQ EKKLINEIKK TAKQGQMGAV
KVMAKDLIRT RHQIEKFYKL KSQLQGVSLR IQTLKSTQAM GEAMKGVTKA MGQMNRQMNL
PSLQKIMQEF ERQNEKMEMV SEVMGDAIDD ALEGDEEEEE TEDLVSQVLD EIGIDINQEL
VNAPSGAVAV PAAKNKVVQA EATGAEDSGG IDSDLQARLD NLRKM


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Tel 0032 16 58 90 45

Fax 0032 16 50 90 45
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GENTAUR Ltd.
Howard Frank Turnberry House
1404-1410 High Road
Whetstone London N20 9BH
Tel 020 3393 8531 Fax 020 8445 9411
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GENTAUR France SARL
9, rue Lagrange, 75005 Paris
Tel 01 43 25 01 50

Fax 01 43 25 01 60
RCS Paris B 484 237 888

SIRET 48423788800017

BNP PARIBAS PARIS PL MAUBERT BIC BNPAFRPPPRG

france@gentaur.com | Gentaur

GENTAUR GmbH
Marienbongard 20
52062 Aachen Deutschland
Support Karolina Elandt
Tel: 0035929830070
Fax: (+49) 241 56 00 47 88

Logistic :0241 40 08 90 86
Bankleitzahl 39050000
IBAN lautet DE8839050000107569353
Handelsregister Aachen HR B 16058
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GENTAUR U.S.A
Genprice Inc, Logistics
547, Yurok Circle
San Jose, CA 95123
CA 95123
Tel (408) 780-0908,
Fax (408) 780-0908,
sales@genprice.com

Genprice Inc, Invoices and accounting
6017 Snell Ave, Ste 357
San Jose, CA 95123




GENTAUR Nederland BV
NL850396268B01 KVK nummer 52327027
Kuiper 1
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IBAN: NL04 RABO 0156 9854 62   SWIFT RABONL2U






GENTAUR Spain
tel:0911876558
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ГЕНТАУЪР БЪЛГАРИЯ
ID # 201 358 931 /BULSTAT
София 1000, ул. "Граф Игнатиев" 53 вх. В, ет. 2
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e-mail: Sofia@gentaur.com | Gentaur
IBAN: BG11FINV91501014771636
BIC: FINVBGSF

GENTAUR Poland Sp. z o.o.


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81-771 Sopot, Poland
TEL Gdansk 058 710 33 44 FAX  058 710 33 48              

poland@gentaur.com | Gentaur

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GENTAUR Italy
SRL IVA IT03841300167
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Fax 02 36 00 65 94
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