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WD repeat-containing protein 11 (Bromodomain and WD repeat-containing protein 2) (WD repeat-containing protein 15)

 WDR11_HUMAN             Reviewed;        1224 AA.
Q9BZH6; Q5VWA1; Q9P2J6;
16-NOV-2001, integrated into UniProtKB/Swiss-Prot.
01-JUN-2001, sequence version 1.
23-MAY-2018, entry version 151.
RecName: Full=WD repeat-containing protein 11;
AltName: Full=Bromodomain and WD repeat-containing protein 2;
AltName: Full=WD repeat-containing protein 15;
Name=WDR11; Synonyms=BRWD2, KIAA1351, WDR15;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND CHROMOSOMAL TRANSLOCATION WITH ZNF320.
PubMed=11536051; DOI=10.1038/sj.onc.1204694;
Chernova O.B., Hunyadi A., Malaj E., Pan H., Crooks C., Roe B.,
Cowell J.K.;
"A novel member of the WD-repeat gene family, WDR11, maps to the 10q26
region and is disrupted by a chromosome translocation in human
glioblastoma cells.";
Oncogene 20:5378-5392(2001).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain;
PubMed=10718198; DOI=10.1093/dnares/7.1.65;
Nagase T., Kikuno R., Ishikawa K., Hirosawa M., Ohara O.;
"Prediction of the coding sequences of unidentified human genes. XVI.
The complete sequences of 150 new cDNA clones from brain which code
for large proteins in vitro.";
DNA Res. 7:65-73(2000).
[3]
SEQUENCE REVISION.
PubMed=12168954; DOI=10.1093/dnares/9.3.99;
Nakajima D., Okazaki N., Yamakawa H., Kikuno R., Ohara O., Nagase T.;
"Construction of expression-ready cDNA clones for KIAA genes: manual
curation of 330 KIAA cDNA clones.";
DNA Res. 9:99-106(2002).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=15164054; DOI=10.1038/nature02462;
Deloukas P., Earthrowl M.E., Grafham D.V., Rubenfield M., French L.,
Steward C.A., Sims S.K., Jones M.C., Searle S., Scott C., Howe K.,
Hunt S.E., Andrews T.D., Gilbert J.G.R., Swarbreck D., Ashurst J.L.,
Taylor A., Battles J., Bird C.P., Ainscough R., Almeida J.P.,
Ashwell R.I.S., Ambrose K.D., Babbage A.K., Bagguley C.L., Bailey J.,
Banerjee R., Bates K., Beasley H., Bray-Allen S., Brown A.J.,
Brown J.Y., Burford D.C., Burrill W., Burton J., Cahill P., Camire D.,
Carter N.P., Chapman J.C., Clark S.Y., Clarke G., Clee C.M., Clegg S.,
Corby N., Coulson A., Dhami P., Dutta I., Dunn M., Faulkner L.,
Frankish A., Frankland J.A., Garner P., Garnett J., Gribble S.,
Griffiths C., Grocock R., Gustafson E., Hammond S., Harley J.L.,
Hart E., Heath P.D., Ho T.P., Hopkins B., Horne J., Howden P.J.,
Huckle E., Hynds C., Johnson C., Johnson D., Kana A., Kay M.,
Kimberley A.M., Kershaw J.K., Kokkinaki M., Laird G.K., Lawlor S.,
Lee H.M., Leongamornlert D.A., Laird G., Lloyd C., Lloyd D.M.,
Loveland J., Lovell J., McLaren S., McLay K.E., McMurray A.,
Mashreghi-Mohammadi M., Matthews L., Milne S., Nickerson T.,
Nguyen M., Overton-Larty E., Palmer S.A., Pearce A.V., Peck A.I.,
Pelan S., Phillimore B., Porter K., Rice C.M., Rogosin A., Ross M.T.,
Sarafidou T., Sehra H.K., Shownkeen R., Skuce C.D., Smith M.,
Standring L., Sycamore N., Tester J., Thorpe A., Torcasso W.,
Tracey A., Tromans A., Tsolas J., Wall M., Walsh J., Wang H.,
Weinstock K., West A.P., Willey D.L., Whitehead S.L., Wilming L.,
Wray P.W., Young L., Chen Y., Lovering R.C., Moschonas N.K.,
Siebert R., Fechtel K., Bentley D., Durbin R.M., Hubbard T.,
Doucette-Stamm L., Beck S., Smith D.R., Rogers J.;
"The DNA sequence and comparative analysis of human chromosome 10.";
Nature 429:375-381(2004).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Placenta;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[6]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Cervix carcinoma;
PubMed=18691976; DOI=10.1016/j.molcel.2008.07.007;
Daub H., Olsen J.V., Bairlein M., Gnad F., Oppermann F.S., Korner R.,
Greff Z., Keri G., Stemmann O., Mann M.;
"Kinase-selective enrichment enables quantitative phosphoproteomics of
the kinome across the cell cycle.";
Mol. Cell 31:438-448(2008).
[7]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Cervix carcinoma;
PubMed=18669648; DOI=10.1073/pnas.0805139105;
Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E.,
Elledge S.J., Gygi S.P.;
"A quantitative atlas of mitotic phosphorylation.";
Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008).
[8]
SUBCELLULAR LOCATION, CHROMOSOMAL TRANSLOCATION, INTERACTION WITH
EMX1, VARIANTS HH14 TRP-395; THR-435; GLN-448; GLN-690 AND LEU-1150,
VARIANT GLN-978, AND CHARACTERIZATION OF VARIANTS HH14 TRP-395;
THR-435; GLN-448; GLN-690 AND LEU-1150.
PubMed=20887964; DOI=10.1016/j.ajhg.2010.08.018;
Kim H.G., Ahn J.W., Kurth I., Ullmann R., Kim H.T., Kulharya A.,
Ha K.S., Itokawa Y., Meliciani I., Wenzel W., Lee D., Rosenberger G.,
Ozata M., Bick D.P., Sherins R.J., Nagase T., Tekin M., Kim S.H.,
Kim C.H., Ropers H.H., Gusella J.F., Kalscheuer V., Choi C.Y.,
Layman L.C.;
"WDR11, a WD protein that interacts with transcription factor EMX1, is
mutated in idiopathic hypogonadotropic hypogonadism and Kallmann
syndrome.";
Am. J. Hum. Genet. 87:465-479(2010).
[9]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Cervix carcinoma;
PubMed=20068231; DOI=10.1126/scisignal.2000475;
Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L.,
Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S.,
Mann M.;
"Quantitative phosphoproteomics reveals widespread full
phosphorylation site occupancy during mitosis.";
Sci. Signal. 3:RA3-RA3(2010).
[10]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21269460; DOI=10.1186/1752-0509-5-17;
Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
"Initial characterization of the human central proteome.";
BMC Syst. Biol. 5:17-17(2011).
[11]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-205 AND SER-209, AND
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Cervix carcinoma, and Erythroleukemia;
PubMed=23186163; DOI=10.1021/pr300630k;
Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
Mohammed S.;
"Toward a comprehensive characterization of a human cancer cell
phosphoproteome.";
J. Proteome Res. 12:260-271(2013).
[12]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Liver;
PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D.,
Wang L., Ye M., Zou H.;
"An enzyme assisted RP-RPLC approach for in-depth analysis of human
liver phosphoproteome.";
J. Proteomics 96:253-262(2014).
[13]
INTERACTION WITH TBC1D23.
PubMed=29084197; DOI=10.1038/ncb3627;
Shin J.J.H., Gillingham A.K., Begum F., Chadwick J., Munro S.;
"TBC1D23 is a bridging factor for endosomal vesicle capture by golgins
at the trans-Golgi.";
Nat. Cell Biol. 19:1424-1432(2017).
-!- SUBUNIT: Interacts (via the N-terminal and the central portion of
the protein) with EMX1 (PubMed:20887964). Interacts with TBC1D23;
this interaction may be indirect (PubMed:29084197).
{ECO:0000269|PubMed:20887964, ECO:0000269|PubMed:29084197}.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
protein {ECO:0000305}. Cytoplasm {ECO:0000269|PubMed:20887964}.
Nucleus {ECO:0000269|PubMed:20887964}. Note=Might be shuttling
between the nucleus and the cytoplasm.
-!- TISSUE SPECIFICITY: Ubiquitous.
-!- DISEASE: Note=A chromosomal aberration involving WDR11 is found in
a form of glioblastoma. Translocation t(10;19)(q26;q13.3) with
ZNF320.
-!- DISEASE: Note=A chromosomal aberration involving WDR11 is found in
a form of Kallmann syndrome. Translocation
46,XY,t(10;12)(q26.12;q13.11).
-!- DISEASE: Hypogonadotropic hypogonadism 14 with or without anosmia
(HH14) [MIM:614858]: A disorder characterized by absent or
incomplete sexual maturation by the age of 18 years, in
conjunction with low levels of circulating gonadotropins and
testosterone and no other abnormalities of the hypothalamic-
pituitary axis. In some cases, it is associated with non-
reproductive phenotypes, such as anosmia, cleft palate, and
sensorineural hearing loss. Anosmia or hyposmia is related to the
absence or hypoplasia of the olfactory bulbs and tracts.
Hypogonadism is due to deficiency in gonadotropin-releasing
hormone and probably results from a failure of embryonic migration
of gonadotropin-releasing hormone-synthesizing neurons. In the
presence of anosmia, idiopathic hypogonadotropic hypogonadism is
referred to as Kallmann syndrome, whereas in the presence of a
normal sense of smell, it has been termed normosmic idiopathic
hypogonadotropic hypogonadism (nIHH).
{ECO:0000269|PubMed:20887964}. Note=The disease is caused by
mutations affecting the gene represented in this entry.
-!- SEQUENCE CAUTION:
Sequence=BAA92589.2; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};
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EMBL; AF320223; AAK08064.1; -; mRNA.
EMBL; AB037772; BAA92589.2; ALT_INIT; mRNA.
EMBL; AC010998; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AL391425; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC040469; AAH40469.1; -; mRNA.
EMBL; BC071564; AAH71564.1; -; mRNA.
CCDS; CCDS7619.1; -.
RefSeq; NP_060587.8; NM_018117.11.
UniGene; Hs.144447; -.
ProteinModelPortal; Q9BZH6; -.
BioGrid; 120839; 31.
CORUM; Q9BZH6; -.
IntAct; Q9BZH6; 8.
MINT; Q9BZH6; -.
STRING; 9606.ENSP00000263461; -.
iPTMnet; Q9BZH6; -.
PhosphoSitePlus; Q9BZH6; -.
BioMuta; WDR11; -.
DMDM; 17368715; -.
EPD; Q9BZH6; -.
MaxQB; Q9BZH6; -.
PaxDb; Q9BZH6; -.
PeptideAtlas; Q9BZH6; -.
PRIDE; Q9BZH6; -.
Ensembl; ENST00000263461; ENSP00000263461; ENSG00000120008.
GeneID; 55717; -.
KEGG; hsa:55717; -.
UCSC; uc021pzt.2; human.
CTD; 55717; -.
DisGeNET; 55717; -.
EuPathDB; HostDB:ENSG00000120008.15; -.
GeneCards; WDR11; -.
HGNC; HGNC:13831; WDR11.
HPA; HPA038980; -.
MalaCards; WDR11; -.
MIM; 606417; gene.
MIM; 614858; phenotype.
neXtProt; NX_Q9BZH6; -.
OpenTargets; ENSG00000120008; -.
Orphanet; 478; Kallmann syndrome.
Orphanet; 432; Normosmic congenital hypogonadotropic hypogonadism.
PharmGKB; PA37818; -.
eggNOG; KOG1912; Eukaryota.
eggNOG; ENOG410XT4R; LUCA.
GeneTree; ENSGT00390000004068; -.
HOGENOM; HOG000294084; -.
HOVERGEN; HBG060317; -.
InParanoid; Q9BZH6; -.
OMA; GNDESPI; -.
OrthoDB; EOG091G012S; -.
PhylomeDB; Q9BZH6; -.
TreeFam; TF314830; -.
SignaLink; Q9BZH6; -.
ChiTaRS; WDR11; human.
GeneWiki; BRWD2; -.
GenomeRNAi; 55717; -.
PRO; PR:Q9BZH6; -.
Proteomes; UP000005640; Chromosome 10.
Bgee; ENSG00000120008; -.
CleanEx; HS_BRWD2; -.
ExpressionAtlas; Q9BZH6; baseline and differential.
Genevisible; Q9BZH6; HS.
GO; GO:0005737; C:cytoplasm; IDA:MGI.
GO; GO:0005829; C:cytosol; IDA:HPA.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005765; C:lysosomal membrane; HDA:UniProtKB.
GO; GO:0016020; C:membrane; HDA:UniProtKB.
GO; GO:0015630; C:microtubule cytoskeleton; IDA:HPA.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
Gene3D; 2.130.10.10; -; 3.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR001680; WD40_repeat.
InterPro; IPR019775; WD40_repeat_CS.
InterPro; IPR036322; WD40_repeat_dom_sf.
SMART; SM00320; WD40; 6.
SUPFAM; SSF50978; SSF50978; 4.
PROSITE; PS00678; WD_REPEATS_1; 3.
1: Evidence at protein level;
Chromosomal rearrangement; Complete proteome; Cytoplasm;
Disease mutation; Hypogonadotropic hypogonadism; Kallmann syndrome;
Membrane; Nucleus; Phosphoprotein; Proto-oncogene; Reference proteome;
Repeat; Transmembrane; Transmembrane helix; WD repeat.
CHAIN 1 1224 WD repeat-containing protein 11.
/FTId=PRO_0000050889.
TRANSMEM 1127 1147 Helical. {ECO:0000255}.
REPEAT 59 108 WD 1.
REPEAT 111 154 WD 2.
REPEAT 354 393 WD 3.
REPEAT 471 510 WD 4.
REPEAT 566 605 WD 5.
REPEAT 708 745 WD 6.
REPEAT 747 787 WD 7.
REPEAT 793 831 WD 8.
REPEAT 893 940 WD 9.
MOD_RES 205 205 Phosphoserine.
{ECO:0000244|PubMed:23186163}.
MOD_RES 209 209 Phosphoserine.
{ECO:0000244|PubMed:23186163}.
MOD_RES 402 402 Phosphoserine.
{ECO:0000250|UniProtKB:Q8K1X1}.
MOD_RES 406 406 Phosphoserine.
{ECO:0000250|UniProtKB:Q8K1X1}.
VARIANT 395 395 R -> W (in HH14; does not affect the
interaction with EMX1; does not affect
the subcellular location of the protein;
dbSNP:rs201051480).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069194.
VARIANT 435 435 A -> T (in HH14; abolishes the
interaction with EMX1; does not affect
the subcellular location of the protein;
dbSNP:rs318240760).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069195.
VARIANT 448 448 R -> Q (in HH14; reduces the interaction
with EMX1; does not affect the
subcellular location of the protein;
dbSNP:rs144440500).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069196.
VARIANT 690 690 H -> Q (in HH14; abolishes the
interaction with EMX1;
dbSNP:rs318240761).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069197.
VARIANT 978 978 K -> Q (in dbSNP:rs144531702).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069198.
VARIANT 1150 1150 F -> L (in HH14; does not affect the
subcellular location of the protein;
dbSNP:rs139007744).
{ECO:0000269|PubMed:20887964}.
/FTId=VAR_069199.
SEQUENCE 1224 AA; 136685 MW; 918221ABEAEFB4ED CRC64;
MLPYTVNFKV SARTLTGALN AHNKAAVDWG WQGLIAYGCH SLVVVIDSIT AQTLQVLEKH
KADVVKVKWA RENYHHNIGS PYCLRLASAD VNGKIIVWDV AAGVAQCEIQ EHAKPIQDVQ
WLWNQDASRD LLLAIHPPNY IVLWNADTGT KLWKKSYADN ILSFSFDPFD PSHLTLLTSE
GIVFISDFSP SKPPSGPGKK VYISSPHSSP AHNKLATATG AKKALNKVKI LITQEKPSAE
FITLNDCLQL AYLPSKRNHM LLLYPREILI LDLEVNQTVG VIAIERTGVP FLQVIPCFQR
DGLFCLHENG CITLRVRRSY NNIFTTSNEE PDPDPVQELT YDLRSQCDAI RVTKTVRPFS
MVCCPVNENA AALVVSDGRV MIWELKSAVC NRNSRNSSSG VSPLYSPVSF CGIPVGVLQN
KLPDLSLDNM IGQSAIAGEE HPRGSILREV HLKFLLTGLL SGLPAPQFAI RMCPPLTTKN
IKMYQPLLAV GTSNGSVLVY HLTSGLLHKE LSIHSCEVKG IEWTSLTSFL SFATSTPNNM
GLVRNELQLV DLPTGRSIAF RGERGNDESA IEMIKVSHLK QYLAVVFRDK PLELWDVRTC
TLLREMSKNF PTITALEWSP SHNLKSLRKK QLATREAMAR QTVVSDTELS IVESSVISLL
QEAESKSELS QNISAREHFV FTDIDGQVYH LTVEGNSVKD SARIPPDGSM GSITCIAWKG
DTLVLGDMDG NLNFWDLKGR VSRGIPTHRS WVRKIRFAPG KGNQKLIAMY NDGAEVWDTK
EVQMVSSLRS GRNVTFRILD VDWCTSDKVI LASDDGCIRV LEMSMKSACF RMDEQELTEP
VWCPYLLVPR ASLALKAFLL HQPWNGQYSL DISHVDYPEN EEIKNLLQEQ LNSLSNDIKK
LLLDPEFTLL QRCLLVSRLY GDESELHFWT VAAHYLHSLS QEKSASTTAP KEAAPRDKLS
NPLDICYDVL CENAYFQKFQ LERVNLQEVK RSTYDHTRKC TDQLLLLGQT DRAVQLLLET
SADNQHYYCD SLKACLVTTV TSSGPSQSTI KLVATNMIAN GKLAEGVQLL CLIDKAADAC
RYLQTYGEWN RAAWLAKVRL NPEECADVLR RWVDHLCSPQ VNQKSKALLV LLSLGCFFSV
AETLHSMRYF DRAALFVEAC LKYGAFEVTE DTEKLITAIY ADYARSLKNL GFKQGAVLFA
SKAGAAGKDL LNELESPKEE PIEE


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52062 Aachen Deutschland
Support Karolina Elandt
Tel: 0035929830070
Fax: (+49) 241 56 00 47 88

Logistic :0241 40 08 90 86
Bankleitzahl 39050000
IBAN lautet DE8839050000107569353
Handelsregister Aachen HR B 16058
Umsatzsteuer-Identifikationsnummer *** DE 815175831
Steuernummer 201/5961/3925
de@gentaur.com | Gentaur

GENTAUR U.S.A
Genprice Inc, Logistics
547, Yurok Circle
San Jose, CA 95123
CA 95123
Tel (408) 780-0908,
Fax (408) 780-0908,
sales@genprice.com

Genprice Inc, Invoices and accounting
6017 Snell Ave, Ste 357
San Jose, CA 95123




GENTAUR Nederland BV
NL850396268B01 KVK nummer 52327027
Kuiper 1
5521 DG Eersel Nederland
Tel:  0208-080893  Fax: 0497-517897
nl@gentaur.com | Gentaur
IBAN: NL04 RABO 0156 9854 62   SWIFT RABONL2U






GENTAUR Spain
tel:0911876558
spain@gentaur.com | Gentaur






ГЕНТАУЪР БЪЛГАРИЯ
ID # 201 358 931 /BULSTAT
София 1000, ул. "Граф Игнатиев" 53 вх. В, ет. 2
Tel 0035924682280 Fax 0035924808322
e-mail: Sofia@gentaur.com | Gentaur
IBAN: BG11FINV91501014771636
BIC: FINVBGSF

GENTAUR Poland Sp. z o.o.


ul. Grunwaldzka 88/A m.2
81-771 Sopot, Poland
TEL Gdansk 058 710 33 44 FAX  058 710 33 48              

poland@gentaur.com | Gentaur

Other countries

Österreich +43720880899

Canada Montreal +15149077481

Ceská republika Praha +420246019719

Danmark +4569918806

Finland Helsset +358942419041

Magyarország Budapest +3619980547

Ireland Dublin+35316526556

Luxembourg+35220880274

Norge Oslo+4721031366

Sverige Stockholm+46852503438

Schweiz Züri+41435006251

US New York+17185132983

GENTAUR Italy
SRL IVA IT03841300167
Piazza Giacomo Matteotti, 6
24122 Bergamo Tel 02 36 00 65 93
Fax 02 36 00 65 94
italia@gentaur.com | Gentaur