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Zinc finger protein 366 (Dendritic cell-specific transcript protein) (DC-SCRIPT)

 ZN366_HUMAN             Reviewed;         744 AA.
Q8N895; Q5HYI9; Q7RTV4;
12-FEB-2003, integrated into UniProtKB/Swiss-Prot.
01-OCT-2002, sequence version 1.
20-JUN-2018, entry version 133.
RecName: Full=Zinc finger protein 366 {ECO:0000303|PubMed:12234665};
AltName: Full=Dendritic cell-specific transcript protein {ECO:0000303|PubMed:16393996};
Short=DC-SCRIPT {ECO:0000303|PubMed:16393996};
Name=ZNF366 {ECO:0000303|PubMed:12234665};
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Spleen;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Heart;
PubMed=17974005; DOI=10.1186/1471-2164-8-399;
Bechtel S., Rosenfelder H., Duda A., Schmidt C.P., Ernst U.,
Wellenreuther R., Mehrle A., Schuster C., Bahr A., Bloecker H.,
Heubner D., Hoerlein A., Michel G., Wedler H., Koehrer K.,
Ottenwaelder B., Poustka A., Wiemann S., Schupp I.;
"The full-ORF clone resource of the German cDNA consortium.";
BMC Genomics 8:399-399(2007).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
IDENTIFICATION.
PubMed=12234665; DOI=10.1016/S0378-1119(02)00793-X;
Gilligan P., Brenner S., Venkatesh B.;
"Fugu and human sequence comparison identifies novel human genes and
conserved non-coding sequences.";
Gene 294:35-44(2002).
[6]
INTERACTION WITH CTBP1, SUBCELLULAR LOCATION, TISSUE SPECIFICITY,
MOTIF, AND MUTAGENESIS OF LEU-593 AND LEU-648.
PubMed=16393996; DOI=10.4049/jimmunol.176.2.1081;
Triantis V., Trancikova D.E., Looman M.W., Hartgers F.C.,
Janssen R.A., Adema G.J.;
"Identification and characterization of DC-SCRIPT, a novel dendritic
cell-expressed member of the zinc finger family of transcriptional
regulators.";
J. Immunol. 176:1081-1089(2006).
[7]
FUNCTION, SUBCELLULAR LOCATION, INTERACTION WITH ESR1; NRIP1 AND
CTBP1, MOTIF, AND MUTAGENESIS OF PRO-590; ASP-592; PRO-645 AND
ASP-647.
PubMed=17085477; DOI=10.1093/nar/gkl875;
Lopez-Garcia J., Periyasamy M., Thomas R.S., Christian M., Leao M.,
Jat P., Kindle K.B., Heery D.M., Parker M.G., Buluwela L.,
Kamalati T., Ali S.;
"ZNF366 is an estrogen receptor corepressor that acts through CtBP and
histone deacetylases.";
Nucleic Acids Res. 34:6126-6136(2006).
-!- FUNCTION: Has transcriptional repression activity. Acts as
corepressor of ESR1; the function seems to involve CTBP1 and
histone deacetylases. {ECO:0000269|PubMed:17085477}.
-!- SUBUNIT: Interacts with ESR1 and NRIP1 (PubMed:17085477).
Interacts (via PXDLS motif) with CTBP1 (PubMed:16393996,
PubMed:17085477). {ECO:0000269|PubMed:16393996,
ECO:0000269|PubMed:17085477}.
-!- INTERACTION:
Q8NHQ1:CEP70; NbExp=5; IntAct=EBI-2813661, EBI-739624;
Q13363:CTBP1; NbExp=5; IntAct=EBI-2813661, EBI-908846;
P03372:ESR1; NbExp=6; IntAct=EBI-2813661, EBI-78473;
P48552:NRIP1; NbExp=2; IntAct=EBI-2813661, EBI-746484;
P25788:PSMA3; NbExp=3; IntAct=EBI-2813661, EBI-348380;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:16393996,
ECO:0000269|PubMed:17085477}.
-!- TISSUE SPECIFICITY: Expressed in immature and mature dendritic
cells (DCs). Not detected in other blood cell types.
{ECO:0000269|PubMed:16393996}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; AK097115; BAC04954.1; -; mRNA.
EMBL; BX647592; CAI46096.1; -; mRNA.
EMBL; CH471084; EAW95707.1; -; Genomic_DNA.
EMBL; BC121053; AAI21054.1; -; mRNA.
EMBL; BK000210; DAA00066.1; -; mRNA.
CCDS; CCDS4015.1; -.
RefSeq; NP_689838.1; NM_152625.2.
UniGene; Hs.224794; -.
UniGene; Hs.370303; -.
ProteinModelPortal; Q8N895; -.
SMR; Q8N895; -.
BioGrid; 127947; 4.
IntAct; Q8N895; 9.
STRING; 9606.ENSP00000313158; -.
iPTMnet; Q8N895; -.
PhosphoSitePlus; Q8N895; -.
BioMuta; ZNF366; -.
DMDM; 28380235; -.
PaxDb; Q8N895; -.
PeptideAtlas; Q8N895; -.
PRIDE; Q8N895; -.
ProteomicsDB; 72385; -.
DNASU; 167465; -.
Ensembl; ENST00000318442; ENSP00000313158; ENSG00000178175.
GeneID; 167465; -.
KEGG; hsa:167465; -.
UCSC; uc003kce.2; human.
CTD; 167465; -.
DisGeNET; 167465; -.
EuPathDB; HostDB:ENSG00000178175.11; -.
GeneCards; ZNF366; -.
HGNC; HGNC:18316; ZNF366.
HPA; HPA023128; -.
HPA; HPA023526; -.
MIM; 610159; gene.
neXtProt; NX_Q8N895; -.
OpenTargets; ENSG00000178175; -.
PharmGKB; PA38314; -.
eggNOG; KOG1721; Eukaryota.
eggNOG; COG5048; LUCA.
GeneTree; ENSGT00750000117653; -.
HOGENOM; HOG000138030; -.
HOVERGEN; HBG055962; -.
InParanoid; Q8N895; -.
OMA; HMMQHSE; -.
OrthoDB; EOG091G02N1; -.
PhylomeDB; Q8N895; -.
TreeFam; TF331510; -.
ChiTaRS; ZNF366; human.
GeneWiki; ZNF366; -.
GenomeRNAi; 167465; -.
PRO; PR:Q8N895; -.
Proteomes; UP000005640; Chromosome 5.
Bgee; ENSG00000178175; -.
CleanEx; HS_ZNF366; -.
ExpressionAtlas; Q8N895; baseline and differential.
Genevisible; Q8N895; HS.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO; GO:0030331; F:estrogen receptor binding; IDA:UniProtKB.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; ISA:NTNU_SB.
GO; GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO; GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IDA:UniProtKB.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IDA:UniProtKB.
GO; GO:0043627; P:response to estrogen; IDA:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
SMART; SM00355; ZnF_C2H2; 11.
SUPFAM; SSF57667; SSF57667; 6.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 11.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 11.
1: Evidence at protein level;
Complete proteome; DNA-binding; Metal-binding; Nucleus; Polymorphism;
Reference proteome; Repeat; Repressor; Transcription;
Transcription regulation; Zinc; Zinc-finger.
CHAIN 1 744 Zinc finger protein 366.
/FTId=PRO_0000047548.
ZN_FING 253 275 C2H2-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 281 303 C2H2-type 2. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 309 331 C2H2-type 3. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 337 359 C2H2-type 4. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 365 387 C2H2-type 5. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 393 415 C2H2-type 6. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 421 443 C2H2-type 7. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 449 471 C2H2-type 8. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 477 499 C2H2-type 9. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 505 527 C2H2-type 10. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 533 556 C2H2-type 11. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
REGION 455 744 Interaction with NRIP1.
{ECO:0000269|PubMed:17085477}.
MOTIF 590 594 PXDLS. {ECO:0000269|PubMed:16393996,
ECO:0000269|PubMed:17085477}.
VARIANT 739 739 A -> G (in dbSNP:rs13188519).
/FTId=VAR_033564.
MUTAGEN 590 590 P->A: Abolishes interaction with CTBP1
and in part relieves transcription
repression; when associated with A-592.
{ECO:0000269|PubMed:17085477}.
MUTAGEN 592 592 D->A: Abolishes interaction with CTBP1
and in part relieves transcription
repression; when associated with A-590.
{ECO:0000269|PubMed:17085477}.
MUTAGEN 593 593 L->A: Abolishes interaction with CTBP1.
Abolishes interaction with CTBP1; when
associated with A-648.
{ECO:0000269|PubMed:16393996}.
MUTAGEN 645 645 P->A: Decreases interaction with CTBP1;
when associated with A-647.
{ECO:0000269|PubMed:17085477}.
MUTAGEN 647 647 D->A: Decreases interaction with CTBP1;
when associated with A-645.
{ECO:0000269|PubMed:17085477}.
MUTAGEN 648 648 L->A: No effect on interaction with
CTBP1. Abolishes interaction with CTBP1;
when associated with A-593.
{ECO:0000269|PubMed:16393996}.
SEQUENCE 744 AA; 85107 MW; D4E12259280727B1 CRC64;
MQKEMKMIKD EDVHFDLAVK KTPSFPHCLQ PVASRGKAPQ RHPFPEALRG PFSQFRYEPP
PGDLDGFPGV FEGAGSRKRK SMPTKMPYNH PAEEVTLALH SEENKNHGLP NLPLLFPQPP
RPKYDSQMID LCNVGFQFYR SLEHFGGKPV KQEPIKPSAV WPQPTPTPFL PTPYPYYPKV
HPGLMFPFFV PSSSPFPFSR HTFLPKQPPE PLLPRKAEPQ ESEETKQKVE RVDVNVQIDD
SYYVDVGGSQ KRWQCPTCEK SYTSKYNLVT HILGHSGIKP HACTHCGKLF KQLSHLHTHM
LTHQGTRPHK CQVCHKAFTQ TSHLKRHMMQ HSEVKPHNCR VCGRGFAYPS ELKAHEAKHA
SGRENICVEC GLDFPTLAQL KRHLTTHRGP IQYNCSECDK TFQYPSQLQN HMMKHKDIRP
YICSECGMEF VQPHHLKQHS LTHKGVKEHK CGICGREFTL LANMKRHVLI HTNIRAYQCH
LCYKSFVQKQ TLKAHMIVHS DVKPFKCKLC GKEFNRMHNL MGHMHLHSDS KPFKCLYCPS
KFTLKGNLTR HMKVKHGVME RGLHSQGLGR GRIALAQTAG VLRSLEQEEP FDLSQKRRAK
VPVFQSDGES AQGSHCHEEE EEDNCYEVEP YSPGLAPQSQ QLCTPEDLST KSEHAPEVLE
EACKEEKEDA SKGEWEKRSK GDLGAEGGQE RDCAGRDECL SLRAFQSTRR GPSFSDYLYF
KHRDESLKEL LERKMEKQAV LLGI


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