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Zinc finger protein GLI2 (Tax helper protein)

 GLI2_MOUSE              Reviewed;        1544 AA.
Q0VGT2; E9PYJ4;
05-APR-2011, integrated into UniProtKB/Swiss-Prot.
27-JUL-2011, sequence version 2.
22-NOV-2017, entry version 109.
RecName: Full=Zinc finger protein GLI2 {ECO:0000305};
AltName: Full=Tax helper protein {ECO:0000250|UniProtKB:P10070};
Name=Gli2 {ECO:0000312|MGI:MGI:95728};
Synonyms=Thp {ECO:0000250|UniProtKB:P10070};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=C57BL/6J;
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J; TISSUE=Eye;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[3]
DISRUPTION PHENOTYPE, AND FUNCTION.
PubMed=9006072;
Mo R., Freer A.M., Zinyk D.L., Crackower M.A., Michaud J., Heng H.H.,
Chik K.W., Shi X.M., Tsui L.C., Cheng S.H., Joyner A.L., Hui C.;
"Specific and redundant functions of Gli2 and Gli3 zinc finger genes
in skeletal patterning and development.";
Development 124:113-123(1997).
[4]
FUNCTION, AND DOMAIN.
PubMed=10433919;
Sasaki H., Nishizaki Y., Hui C., Nakafuku M., Kondoh H.;
"Regulation of Gli2 and Gli3 activities by an amino-terminal
repression domain: implication of Gli2 and Gli3 as primary mediators
of Shh signaling.";
Development 126:3915-3924(1999).
[5]
FUNCTION, SUBCELLULAR LOCATION, AND INTERACTION WITH SUFU AND STK36.
PubMed=10806483; DOI=10.1038/35010610;
Murone M., Luoh S.-L., Stone D., Li W., Gurney A., Armanini M.,
Grey C., Rosenthal A., de Sauvage F.J.;
"Gli regulation by the opposing activities of fused and suppressor of
fused.";
Nat. Cell Biol. 2:310-312(2000).
[6]
INTERACTION WITH ZIC1 AND ZIC2.
PubMed=11238441; DOI=10.1074/jbc.C000773200;
Koyabu Y., Nakata K., Mizugishi K., Aruga J., Mikoshiba K.;
"Physical and functional interactions between Zic and Gli proteins.";
J. Biol. Chem. 276:6889-6892(2001).
[7]
PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-707 AND THR-708, AND
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Embryonic fibroblast;
PubMed=19131326; DOI=10.1074/mcp.M800451-MCP200;
Sweet S.M., Bailey C.M., Cunningham D.L., Heath J.K., Cooper H.J.;
"Large scale localization of protein phosphorylation by use of
electron capture dissociation mass spectrometry.";
Mol. Cell. Proteomics 8:904-912(2009).
[8]
INTERACTION WITH SUFU, AND SUBCELLULAR LOCATION.
PubMed=23034632; DOI=10.1242/dev.081190;
Li Z.J., Nieuwenhuis E., Nien W., Zhang X., Zhang J., Puviindran V.,
Wainwright B.J., Kim P.C., Hui C.C.;
"Kif7 regulates Gli2 through Sufu-dependent and -independent functions
during skin development and tumorigenesis.";
Development 139:4152-4161(2012).
[9]
SUBCELLULAR LOCATION.
PubMed=25644602; DOI=10.1101/gad.252676.114;
Chong Y.C., Mann R.K., Zhao C., Kato M., Beachy P.A.;
"Bifurcating action of Smoothened in Hedgehog signaling is mediated by
Dlg5.";
Genes Dev. 29:262-276(2015).
-!- FUNCTION: Functions as transcription regulator in the hedgehog
(Hh) pathway (PubMed:9006072). Functions as transcriptional
activator (PubMed:10806483). May also function as transcriptional
repressor (PubMed:10433919). Requires STK36 for full
transcriptional activator activity (PubMed:10806483). Binds to the
DNA sequence 5'-GAACCACCCA-3' which is part of the TRE-2S
regulatory element (By similarity). Is involved in the smoothened
(SHH) signaling pathway (PubMed:10433919). Required for normal
skeleton development (PubMed:9006072).
{ECO:0000250|UniProtKB:P10070, ECO:0000269|PubMed:10806483,
ECO:0000269|PubMed:9006072, ECO:0000305|PubMed:10433919}.
-!- SUBUNIT: Interacts with ZIC1 and ZIC2 (PubMed:11238441). Interacts
with STK36 (PubMed:10806483). Interacts with SUFU; this inhibits
transcriptional activation mediated by GLI2 (PubMed:10806483,
PubMed:23034632). {ECO:0000269|PubMed:10806483,
ECO:0000269|PubMed:11238441, ECO:0000269|PubMed:23034632}.
-!- INTERACTION:
Q6ZWS8:Spop; NbExp=2; IntAct=EBI-9344284, EBI-7128920;
Q9UMX1:SUFU (xeno); NbExp=3; IntAct=EBI-9344284, EBI-740595;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000269|PubMed:10806483}.
Cytoplasm {ECO:0000269|PubMed:10806483}. Cell projection, cilium
{ECO:0000269|PubMed:25644602}. Note=STK36 promotes translocation
to the nucleus (PubMed:10806483). In keratinocytes, it is
sequestered in the cytoplasm by SUFU. In the absence of SUFU, it
translocates to the nucleus (PubMed:23034632).
{ECO:0000269|PubMed:10806483, ECO:0000269|PubMed:23034632}.
-!- DOMAIN: The N-terminal domain confers transcriptional repressor
activity, while the C-terminal domain mediates transcriptional
activation. {ECO:0000269|PubMed:10433919}.
-!- PTM: Phosphorylated in vitro by ULK3. Phosphorylated by DYRK2;
this inhibits GLI2 transcription factor activity and promotes
proteasomal degradation of GLI2. {ECO:0000250|UniProtKB:P10070}.
-!- PTM: Acetylation at Lys-740 inhibits Hh target gene expression,
probably by impeding entry into chromatin thus preventing promoter
occupancy. {ECO:0000250|UniProtKB:P10070}.
-!- DISRUPTION PHENOTYPE: Full embryonic lethality. Homozygous embryos
are detected at the expected Mendelian rate up to about 18.5 dpc,
but there are no live pups. Mutant embryos present important
craniofacial defects, including defects of the medial portion of
the frontal and parietal skull bones, absence of upper and/or
lower incisors, often combined with a cleft palate. Besides,
mutant embryos show defects in the ossification of skeletal bones
and shortened limb bones. {ECO:0000269|PubMed:9006072}.
-!- SIMILARITY: Belongs to the GLI C2H2-type zinc-finger protein
family. {ECO:0000305}.
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EMBL; AC109271; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC122287; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC132589; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC085190; AAH85190.1; -; mRNA.
CCDS; CCDS35692.1; -.
RefSeq; NP_001074594.1; NM_001081125.1.
UniGene; Mm.273292; -.
ProteinModelPortal; Q0VGT2; -.
SMR; Q0VGT2; -.
BioGrid; 199943; 13.
CORUM; Q0VGT2; -.
DIP; DIP-60772N; -.
ELM; Q0VGT2; -.
IntAct; Q0VGT2; 2.
STRING; 10090.ENSMUSP00000054837; -.
iPTMnet; Q0VGT2; -.
PhosphoSitePlus; Q0VGT2; -.
PaxDb; Q0VGT2; -.
PeptideAtlas; Q0VGT2; -.
PRIDE; Q0VGT2; -.
Ensembl; ENSMUST00000062483; ENSMUSP00000054837; ENSMUSG00000048402.
GeneID; 14633; -.
KEGG; mmu:14633; -.
UCSC; uc007cim.1; mouse.
CTD; 2736; -.
MGI; MGI:95728; Gli2.
eggNOG; KOG1721; Eukaryota.
eggNOG; COG5048; LUCA.
GeneTree; ENSGT00900000140802; -.
HOGENOM; HOG000290688; -.
HOVERGEN; HBG005844; -.
InParanoid; Q0VGT2; -.
KO; K16798; -.
OMA; GQIHMYE; -.
OrthoDB; EOG091G01XS; -.
TreeFam; TF350216; -.
Reactome; R-MMU-5610787; Hedgehog 'off' state.
Reactome; R-MMU-5632684; Hedgehog 'on' state.
ChiTaRS; Gli2; mouse.
PRO; PR:Q0VGT2; -.
Proteomes; UP000000589; Chromosome 1.
Bgee; ENSMUSG00000048402; -.
ExpressionAtlas; Q0VGT2; baseline and differential.
Genevisible; Q0VGT2; MM.
GO; GO:0005930; C:axoneme; IDA:CACAO.
GO; GO:0097542; C:ciliary tip; IDA:MGI.
GO; GO:0005929; C:cilium; IDA:UniProtKB.
GO; GO:0005737; C:cytoplasm; IDA:MGI.
GO; GO:0005829; C:cytosol; TAS:Reactome.
GO; GO:0016020; C:membrane; IDA:MGI.
GO; GO:0031514; C:motile cilium; IDA:MGI.
GO; GO:0016607; C:nuclear speck; IDA:MGI.
GO; GO:0005730; C:nucleolus; ISO:MGI.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0003682; F:chromatin binding; IDA:MGI.
GO; GO:0003677; F:DNA binding; IDA:MGI.
GO; GO:1990841; F:promoter-specific chromatin binding; IDA:UniProtKB.
GO; GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:NTNU_SB.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; IDA:MGI.
GO; GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO; GO:0044212; F:transcription regulatory region DNA binding; IDA:MGI.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding; IDA:NTNU_SB.
GO; GO:0008270; F:zinc ion binding; ISO:MGI.
GO; GO:0048856; P:anatomical structure development; IMP:MGI.
GO; GO:0048646; P:anatomical structure formation involved in morphogenesis; IGI:MGI.
GO; GO:0009952; P:anterior/posterior pattern specification; IGI:MGI.
GO; GO:0007411; P:axon guidance; IMP:MGI.
GO; GO:0048754; P:branching morphogenesis of an epithelial tube; IMP:MGI.
GO; GO:0030154; P:cell differentiation; IMP:MGI.
GO; GO:0008283; P:cell proliferation; IGI:MGI.
GO; GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.
GO; GO:0098586; P:cellular response to virus; ISO:MGI.
GO; GO:0021696; P:cerebellar cortex morphogenesis; IMP:MGI.
GO; GO:0002062; P:chondrocyte differentiation; IGI:MGI.
GO; GO:0090103; P:cochlea morphogenesis; IMP:MGI.
GO; GO:0048589; P:developmental growth; IMP:MGI.
GO; GO:0021904; P:dorsal/ventral neural tube patterning; IDA:MGI.
GO; GO:0009953; P:dorsal/ventral pattern formation; IGI:MGI.
GO; GO:0048566; P:embryonic digestive tract development; IMP:MGI.
GO; GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.
GO; GO:0009913; P:epidermal cell differentiation; ISO:MGI.
GO; GO:0021508; P:floor plate formation; IMP:MGI.
GO; GO:0060322; P:head development; IMP:MGI.
GO; GO:0007507; P:heart development; IGI:MGI.
GO; GO:0030902; P:hindbrain development; IMP:MGI.
GO; GO:0007442; P:hindgut morphogenesis; IMP:MGI.
GO; GO:0001701; P:in utero embryonic development; IMP:MGI.
GO; GO:0001822; P:kidney development; IGI:MGI.
GO; GO:0030324; P:lung development; IMP:MGI.
GO; GO:0030879; P:mammary gland development; IMP:MGI.
GO; GO:0060603; P:mammary gland duct morphogenesis; IMP:MGI.
GO; GO:0002009; P:morphogenesis of an epithelium; IMP:MGI.
GO; GO:0043066; P:negative regulation of apoptotic process; IDA:MGI.
GO; GO:0032331; P:negative regulation of chondrocyte differentiation; IMP:MGI.
GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.
GO; GO:0021915; P:neural tube development; IMP:MGI.
GO; GO:0048666; P:neuron development; IMP:MGI.
GO; GO:0060032; P:notochord regression; IGI:MGI.
GO; GO:0042475; P:odontogenesis of dentin-containing tooth; IMP:MGI.
GO; GO:0002076; P:osteoblast development; IDA:MGI.
GO; GO:0001649; P:osteoblast differentiation; IGI:MGI.
GO; GO:0007389; P:pattern specification process; IMP:MGI.
GO; GO:0021983; P:pituitary gland development; IGI:MGI.
GO; GO:0008284; P:positive regulation of cell proliferation; IMP:MGI.
GO; GO:0045740; P:positive regulation of DNA replication; ISO:MGI.
GO; GO:0045666; P:positive regulation of neuron differentiation; IGI:MGI.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:NTNU_SB.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:CACAO.
GO; GO:0060513; P:prostatic bud formation; IMP:MGI.
GO; GO:0009954; P:proximal/distal pattern formation; IGI:MGI.
GO; GO:0008589; P:regulation of smoothened signaling pathway; IMP:MGI.
GO; GO:0009612; P:response to mechanical stimulus; IEA:Ensembl.
GO; GO:0001501; P:skeletal system development; IMP:MGI.
GO; GO:0007224; P:smoothened signaling pathway; IMP:MGI.
GO; GO:0060831; P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning; IGI:MGI.
GO; GO:0021938; P:smoothened signaling pathway involved in regulation of cerebellar granule cell precursor cell proliferation; IMP:MGI.
GO; GO:0021776; P:smoothened signaling pathway involved in spinal cord motor neuron cell fate specification; IGI:MGI.
GO; GO:0021775; P:smoothened signaling pathway involved in ventral spinal cord interneuron specification; IGI:MGI.
GO; GO:0021513; P:spinal cord dorsal/ventral patterning; IMP:MGI.
GO; GO:0021522; P:spinal cord motor neuron differentiation; IMP:MGI.
GO; GO:0021965; P:spinal cord ventral commissure morphogenesis; IMP:MGI.
GO; GO:0035295; P:tube development; IGI:MGI.
GO; GO:0007418; P:ventral midline development; IMP:MGI.
GO; GO:0021517; P:ventral spinal cord development; IMP:MGI.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
SMART; SM00355; ZnF_C2H2; 5.
SUPFAM; SSF57667; SSF57667; 3.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 4.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 4.
1: Evidence at protein level;
Acetylation; Activator; Cell projection; Cilium; Complete proteome;
Cytoplasm; Developmental protein; DNA-binding; Metal-binding; Nucleus;
Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription;
Transcription regulation; Zinc; Zinc-finger.
CHAIN 1 1544 Zinc finger protein GLI2.
/FTId=PRO_0000406215.
ZN_FING 417 444 C2H2-type 1. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 455 477 C2H2-type 2; degenerate.
{ECO:0000255|PROSITE-ProRule:PRU00042}.
ZN_FING 483 507 C2H2-type 3. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 513 538 C2H2-type 4. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
ZN_FING 544 569 C2H2-type 5. {ECO:0000255|PROSITE-
ProRule:PRU00042}.
COMPBIAS 789 854 Ser-rich.
MOD_RES 145 145 Phosphoserine.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 230 230 Phosphoserine.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 232 232 Phosphoserine.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 238 238 Phosphoserine.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 385 385 Phosphoserine; by DYRK2.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 707 707 Phosphoserine.
{ECO:0000244|PubMed:19131326}.
MOD_RES 708 708 Phosphothreonine.
{ECO:0000244|PubMed:19131326}.
MOD_RES 740 740 N6-acetyllysine; by EP300.
{ECO:0000250|UniProtKB:P10070}.
MOD_RES 997 997 Phosphoserine; by DYRK2.
{ECO:0000250|UniProtKB:P10070}.
CONFLICT 71 71 Y -> S (in Ref. 2; AAH85190).
{ECO:0000305}.
SEQUENCE 1544 AA; 165031 MW; EA290773B3DE1D6A CRC64;
METSAPAPAL EKKEAKSGLL EDSSFPDPGK KACPLAVAAA VAAHGVPQQL LPAFHAPLPI
DMRHQEGRYH YDPHSVHSVH GPPTLSGSPV ISDISLIRLS PHPAGPGESP FSAHHPYVNP
HMEHYLRSVH SSPTLSMISA ARGLSPADVA HEHLKERGLF SLAAPGTNPS DYYHQMTLMA
SHPTPYGDLL MQSGGAASAP HLHDYLNPVD ASRFSSPRVT PRLSRKRALS ISPLSDASLD
LQRMIRTSPN SLVAYINNSR SSSAASGSYG HLSAGALSPA FTFPHPINPV AYQQILSQQR
GLGSAFGHTP PLIQPSPTFL AQQPMTLTSI STMPTQLSSS SSNCLNDANQ NKQNSESAVS
STVNPITIHK RSKVKTEAEG LRPASPLGLT QEQLADLKED LDRDDCKQEA EVVIYETNCH
WADCTKEYDT QEQLVHHINN EHIHGEKKEF VCRWQACTRE QKPFKAQYML VVHMRRHTGE
KPHKCTFEGC SKAYSRLENL KTHLRSHTGE KPYVCEHEGC NKAFSNASDR AKHQNRTHSN
EKPYICKIPG CTKRYTDPSS LRKHVKTVHG PDAHVTKKQR NDVHVRAPLL KENGDNEASA
EPGGRGPEES VEASSTSHTV EDCLHIKAIK TESSGLCQSS PGAQSSCSSE PSPLGSAPNN
DSGMEMPGTG PGSLGDLTAL ADTCPGADTS ALAAPSTGGL QLRKHMSTVH RFEQLKREKL
KSLKDSCSWA GPAPHTRNTK LPPLPVNGSV LENFNNTGGG GPAGLLPSQR LPELTEVTML
SQLQERRDSS TSTMSSAYTV SRRSSGISPY FSSRRSSEAS PLGGLRPHNA SSADSYDPIS
TDASRRSSEA SQCSGGGPGL LNLTPAQQYN LRAKYAAATG GPPPTPLPGL DRVSLRTRLA
LLDAPERALP GACPHPLGPR RGSDGPTYSH GHGHGYAGAA PAFPHEGPNS STRRASDPVR
RPDPLILPRV QRFHSTHNMN PGSLPPCADR RGLHVQSHPS VDSNLTRNAY SPRPPSINEN
VVMEAVAAGV DGPGLECDLG LVEDELVLPD DVVQYIKAHT GGTLDDGIRQ GYPTEGTGFP
ENSKLPSPGL QGHRRLAAAD SNMGPSAPGL GGCQLSYSPS SNLNKSNMPV QWNEVSSGTV
DALPTQVKPP PFPHSNLAVV QQKPAFGQYP GYNPQSVQSS SGGLDSTQPH LQLRGAPSAS
RGSYTQQPRQ PAAGSQCLGM SAAMSPQASY SQAHPQLSPN IVSGSLNQFS PSCSNMAAKP
SHLGLPQQME VVPNATIMNG HQREHGVPNS SLAAVSQPHP VLSYPQQDSY QQGSNLLSSH
QPGFMESQQN AGFGLMQPRP PLEPNTASRH RGVRSGQQQL YARTTGQAMV TSANQETAEA
MPKGPAGTMV SLAPQPSQDT GRAQDQNTLY YYGQIHMYEQ NGGCPAVQPQ PPQPQACSDS
IQPEPLPSPG VNQVSSTVDS QLLEPPQIDF DAIMDDGDHS SLFSGALSPT LLHNLSQNSS
RLTTPRNSLT LPSIPAGISN MAVGDMSSML TSLAEESKFL NMMT


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EIAAB47275 Homo sapiens,Human,Zinc finger protein 167,Zinc finger protein 448,Zinc finger protein 64,Zinc finger protein with KRAB and SCAN domains 7,ZKSCAN7,ZNF167,ZNF448,ZNF64
EIAAB14743 Fez family zinc finger protein 2,FEZF2,FEZL,FKSG36,Forebrain embryonic zinc finger-like protein 2,Homo sapiens,Human,Zinc finger protein 312,Zinc finger protein Fez-like,ZNF312
EIAAB47878 HDSG1,Heart development-specific gene 1 protein,Homo sapiens,Human,KOX11,Zinc finger protein 18,Zinc finger protein 535,Zinc finger protein KOX11,Zinc finger protein with KRAB and SCAN domains 6,ZKSCA


 

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