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Zyx102 protein (Zyx102.44 isoform) (Zyxin, isoform B) (Zyxin, isoform L)

 Q9N675_DROME            Unreviewed;       585 AA.
Q9N675;
01-OCT-2000, integrated into UniProtKB/TrEMBL.
01-OCT-2000, sequence version 1.
10-OCT-2018, entry version 147.
SubName: Full=Zyx102 protein {ECO:0000313|EMBL:AAF33232.1};
SubName: Full=Zyx102.44 isoform {ECO:0000313|EMBL:AAF33231.1};
SubName: Full=Zyxin, isoform B {ECO:0000313|EMBL:AAN06575.1};
SubName: Full=Zyxin, isoform L {ECO:0000313|EMBL:AAN06576.1};
Name=Zyx {ECO:0000313|EMBL:AAN06575.1,
ECO:0000313|FlyBase:FBgn0011642};
Synonyms=BcDNA:LD06023 {ECO:0000313|EMBL:AAN06575.1},
DLim-1 {ECO:0000313|EMBL:AAN06575.1},
Dmel\CG32018 {ECO:0000313|EMBL:AAN06575.1},
DmLIM-1 {ECO:0000313|EMBL:AAN06575.1},
lim {ECO:0000313|EMBL:AAN06575.1},
Lim102EF {ECO:0000313|EMBL:AAN06575.1},
zyx {ECO:0000313|EMBL:AAN06575.1},
ZYX102 {ECO:0000313|EMBL:AAN06575.1},
Zyx102 {ECO:0000313|EMBL:AAN06575.1},
zyx102 {ECO:0000313|EMBL:AAN06575.1},
Zyx102EF {ECO:0000313|EMBL:AAF33232.1,
ECO:0000313|FlyBase:FBgn0011642}, zyxin {ECO:0000313|EMBL:AAN06575.1};
ORFNames=CG32018 {ECO:0000313|FlyBase:FBgn0011642},
Dmel_CG32018 {ECO:0000313|EMBL:AAN06575.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF33232.1};
[1] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAF33232.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Body {ECO:0000313|EMBL:AAF33232.1};
PubMed=12594038; DOI=10.1016/S0378-1119(02)01173-3;
Renfranz P.J., Siegrist S.E., Stronach B.E., Macalma T.,
Beckerle M.C.;
"Molecular and phylogenetic characterization of Zyx102, a Drosophila
orthologue of the zyxin family that interacts with Drosophila
Enabled.";
Gene 305:13-26(2003).
[7] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[8] {ECO:0000313|EMBL:AAN06575.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAN06575.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[11] {ECO:0000313|EMBL:AAN06575.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[12] {ECO:0000313|EMBL:AAN06575.1}
NUCLEOTIDE SEQUENCE.
PubMed=26109357;
FlyBase Consortium;
Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B.,
St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.,
Strelets V., Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: Impact of High-
Throughput Data.";
G3 (Bethesda) 5:1721-1736(2015).
[13] {ECO:0000313|EMBL:AAN06575.1}
NUCLEOTIDE SEQUENCE.
PubMed=26109356;
FlyBase Consortium;
Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B.,
St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.,
Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: The Rule-
Benders.";
G3 (Bethesda) 5:1737-1749(2015).
[14] {ECO:0000313|EMBL:AAN06575.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
-!- INTERACTION:
Q9VA38:wts; NbExp=4; IntAct=EBI-16223133, EBI-82717;
-----------------------------------------------------------------------
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EMBL; AF219947; AAF33231.1; -; Genomic_DNA.
EMBL; AF219948; AAF33232.1; -; mRNA.
EMBL; AE014135; AAN06575.1; -; Genomic_DNA.
EMBL; AE014135; AAN06576.1; -; Genomic_DNA.
RefSeq; NP_652015.1; NM_143758.4.
RefSeq; NP_726642.1; NM_166819.3.
UniGene; Dm.20809; -.
DIP; DIP-58972N; -.
IntAct; Q9N675; 1.
STRING; 7227.FBpp0088275; -.
EnsemblMetazoa; FBtr0089211; FBpp0088275; FBgn0011642.
EnsemblMetazoa; FBtr0345298; FBpp0311465; FBgn0011642.
GeneID; 317824; -.
UCSC; CG32018-RB; d. melanogaster.
CTD; 7791; -.
FlyBase; FBgn0011642; Zyx.
eggNOG; KOG1701; Eukaryota.
eggNOG; ENOG410Y3GP; LUCA.
GeneTree; ENSGT00760000119039; -.
OrthoDB; EOG091G085F; -.
Reactome; R-DME-446353; Cell-extracellular matrix interactions.
GenomeRNAi; 317824; -.
Proteomes; UP000000803; Chromosome 4.
Bgee; FBgn0011642; Expressed in 26 organ(s), highest expression level in antenna.
GO; GO:0005911; C:cell-cell junction; ISS:FlyBase.
GO; GO:0005856; C:cytoskeleton; ISS:FlyBase.
GO; GO:0005925; C:focal adhesion; ISS:FlyBase.
GO; GO:0001725; C:stress fiber; IDA:FlyBase.
GO; GO:0035003; C:subapical complex; IDA:FlyBase.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0007155; P:cell adhesion; ISS:FlyBase.
GO; GO:0007593; P:chitin-based cuticle sclerotization; IMP:FlyBase.
GO; GO:0048526; P:imaginal disc-derived wing expansion; IMP:FlyBase.
GO; GO:0035002; P:liquid clearance, open tracheal system; IMP:FlyBase.
GO; GO:0035331; P:negative regulation of hippo signaling; IMP:FlyBase.
GO; GO:0045805; P:positive regulation of eclosion; IMP:FlyBase.
GO; GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.
GO; GO:0046622; P:positive regulation of organ growth; IMP:FlyBase.
GO; GO:0007430; P:terminal branching, open tracheal system; IMP:FlyBase.
InterPro; IPR001781; Znf_LIM.
Pfam; PF00412; LIM; 3.
SMART; SM00132; LIM; 3.
PROSITE; PS00478; LIM_DOMAIN_1; 1.
PROSITE; PS50023; LIM_DOMAIN_2; 3.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
LIM domain {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461}.
DOMAIN 386 445 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
DOMAIN 446 506 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
DOMAIN 507 576 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
SEQUENCE 585 AA; 65723 MW; CCE568567E79BFF4 CRC64;
MESVAQQLRE LSLPKGDTGS PLVCIGHGKV AKLVAKISNN QNASVKRRLD IPPKPPIKYN
EMPQVPSSRQ VLCSREPLYS QPLIGVEKTM RGHMPFRKYL SSEFGVADTQ INRKTTLDNP
AILEQQLEAL AYHKLQMEKK GLLGVQAKPT QPLNSFTKPL SKTLSKSLIY SNLGSVRKEI
ETLELLTDET KISASTYSNV NETAMDSSHS STQKMLSVCT NFISDNEKDE LPPPPSPESA
VSSSYSELRH ATLEFNKPID YLQNNQTTNP LQIYANQYAM QHDATGKSSS TYDSIYEPIN
PRPCVADTLP RESYNLHNSY VNDNNPNISH EYNISNSIEA NQTLYIHGNA RTTFYDVNSI
HRNDKEGLKN YISIPTEPVQ ELENYGRCVK CNSRVLGESS GCTAMDQIYH IFCFTCTDCQ
INLQGKPFYA LDGKPYCEYD YLQTLEKCSV CMEPILERIL RATGKPYHPQ CFTCVVCGKS
LDGLLFTVDA TNQNYCITDF HKKFAPRCCV CKQPIMPDPG QEETIRVVAL DRSFHLECYK
CEDCGLLLSS EAEGRGCYPL DDHVLCKSCN AKRVQALTNR MTSEH


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