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Zyxin

 K7FS53_PELSI            Unreviewed;       594 AA.
K7FS53;
09-JAN-2013, integrated into UniProtKB/TrEMBL.
09-JAN-2013, sequence version 1.
31-JAN-2018, entry version 38.
SubName: Full=Zyxin {ECO:0000313|Ensembl:ENSPSIP00000010863};
Name=ZYX {ECO:0000313|Ensembl:ENSPSIP00000010863};
Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Testudines; Cryptodira; Trionychia; Trionychidae;
Pelodiscus.
NCBI_TaxID=13735 {ECO:0000313|Ensembl:ENSPSIP00000010863, ECO:0000313|Proteomes:UP000007267};
[1] {ECO:0000313|Ensembl:ENSPSIP00000010863}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=17381049; DOI=10.1080/10425170600760091;
Jung S.-O., Lee Y.-M., Kartavtsev Y., Park I.-S., Kim D.S., Lee J.-S.;
"The complete mitochondrial genome of the Korean soft-shelled turtle
Pelodiscus sinensis (Testudines, Trionychidae).";
DNA Seq. 17:471-483(2006).
[2] {ECO:0000313|Proteomes:UP000007267}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Daiwa-1 {ECO:0000313|Proteomes:UP000007267};
Soft-shell Turtle Genome Consortium;
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|Ensembl:ENSPSIP00000010863}
IDENTIFICATION.
Ensembl;
Submitted (NOV-2012) to UniProtKB.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSPSIP00000010863}.
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EMBL; AGCU01115252; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AGCU01115253; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AGCU01115254; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; XP_006127411.1; XM_006127349.2.
RefSeq; XP_006127412.1; XM_006127350.2.
RefSeq; XP_006127413.1; XM_006127351.2.
RefSeq; XP_006127414.1; XM_006127352.2.
RefSeq; XP_006127415.1; XM_006127353.2.
RefSeq; XP_014431123.1; XM_014575637.1.
STRING; 13735.ENSPSIP00000010863; -.
Ensembl; ENSPSIT00000010918; ENSPSIP00000010863; ENSPSIG00000009751.
GeneID; 102462125; -.
CTD; 7791; -.
eggNOG; KOG1701; Eukaryota.
eggNOG; ENOG410Y3GP; LUCA.
GeneTree; ENSGT00760000119039; -.
OMA; EADENGC; -.
OrthoDB; EOG091G085F; -.
TreeFam; TF320310; -.
Proteomes; UP000007267; Unassembled WGS sequence.
GO; GO:0005913; C:cell-cell adherens junction; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0005925; C:focal adhesion; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0045335; C:phagocytic vesicle; IEA:Ensembl.
GO; GO:0001725; C:stress fiber; IEA:Ensembl.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0003723; F:RNA binding; IEA:Ensembl.
GO; GO:0007160; P:cell-matrix adhesion; IEA:Ensembl.
GO; GO:0071346; P:cellular response to interferon-gamma; IEA:Ensembl.
GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:Ensembl.
GO; GO:0043149; P:stress fiber assembly; IEA:Ensembl.
GO; GO:0007179; P:transforming growth factor beta receptor signaling pathway; IEA:Ensembl.
InterPro; IPR001781; Znf_LIM.
Pfam; PF00412; LIM; 3.
SMART; SM00132; LIM; 3.
PROSITE; PS50023; LIM_DOMAIN_2; 3.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000007267};
LIM domain {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461};
Reference proteome {ECO:0000313|Proteomes:UP000007267};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00125,
ECO:0000256|SAAS:SAAS00113461}.
DOMAIN 402 460 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
DOMAIN 462 522 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
DOMAIN 523 592 LIM zinc-binding.
{ECO:0000259|PROSITE:PS50023}.
COILED 154 174 {ECO:0000256|SAM:Coils}.
SEQUENCE 594 AA; 63792 MW; 8CE34F34BC376A61 CRC64;
MASSGSPGTR MTSTVSINIS TPSFYSPQKK FAPVVAPKPK VNPFKAGGAV PGSASEPSLP
QPSGAGAQRA QIGKVGEIPQ AAAPLLTEEL PLPPPPPPGE ETVMSPTSAF PPPPPPFEEP
FPSAPEEVFP SPPPSMADEG LETGVPASQV RGKMSSIDLE IDSLSSMLDD MEKNDPFKSR
VAPLETHSAP KGHIEIMAMP KDPPVPASFP PKFTPKPSGG FTPKPSEVGI APAPTPWAAP
LQRRDPPEMQ SRAPAPSAAP LPSAPPAPKF TPSPVANSPR FGSKPAAGAP GVSPNPTRFT
APPPAQTRFT APSAVSSAPK TQPPSFTYAQ QRERPQVQEK PRPAAHPAAP RDMHRAPMGT
GSEPPRGNSS LTMKEVEELE MLTQKLMKDM EHPPHAEAST SELCGLCRKP LSRTQPAVRA
LDCLFHVECF TCFKCEKQLQ GQQFYNVDEK PFCEDCYAGT LEKCSVCKQT ITDRMLKATG
NSYHPQCFTC VVCQTPLEGA SFIVDQANQP HCVDDYHRKY APRCSVCTEP IMPEPGKDET
VRVVALEKNF HMKCYKCEDC ERPLSIEADE NGCFPLDGHV LCMKCHTTRA KAAH


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