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c-Myc-binding protein (Associate of Myc 1) (AMY-1)

 MYCBP_HUMAN             Reviewed;         103 AA.
Q99417; B2R4N0; Q5TA64; Q96HE2;
11-FEB-2002, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 3.
20-JUN-2018, entry version 155.
RecName: Full=c-Myc-binding protein;
AltName: Full=Associate of Myc 1;
Short=AMY-1;
Name=MYCBP; Synonyms=AMY1;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Placenta;
PubMed=9797456; DOI=10.1046/j.1365-2443.1998.00206.x;
Taira T., Maeda J., Ohishi T., Kitaura H., Yoshida S., Kato H.,
Ikeda M., Tamai K., Iguchi-Ariga S.M.M., Ariga H.;
"AMY-1, a novel C-MYC binding protein that stimulates transcription
activity of C-MYC.";
Genes Cells 3:549-565(1998).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S.,
Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y.,
Phelan M., Farmer A.;
"Cloning of human full-length CDSs in BD Creator(TM) system donor
vector.";
Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Placenta;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=19054851; DOI=10.1038/nmeth.1273;
Goshima N., Kawamura Y., Fukumoto A., Miura A., Honma R., Satoh R.,
Wakamatsu A., Yamamoto J., Kimura K., Nishikawa T., Andoh T., Iida Y.,
Ishikawa K., Ito E., Kagawa N., Kaminaga C., Kanehori K., Kawakami B.,
Kenmochi K., Kimura R., Kobayashi M., Kuroita T., Kuwayama H.,
Maruyama Y., Matsuo K., Minami K., Mitsubori M., Mori M.,
Morishita R., Murase A., Nishikawa A., Nishikawa S., Okamoto T.,
Sakagami N., Sakamoto Y., Sasaki Y., Seki T., Sono S., Sugiyama A.,
Sumiya T., Takayama T., Takayama Y., Takeda H., Togashi T., Yahata K.,
Yamada H., Yanagisawa Y., Endo Y., Imamoto F., Kisu Y., Tanaka S.,
Isogai T., Imai J., Watanabe S., Nomura N.;
"Human protein factory for converting the transcriptome into an in
vitro-expressed proteome.";
Nat. Methods 5:1011-1017(2008).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16710414; DOI=10.1038/nature04727;
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D.,
Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A.,
Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F.,
McDonald L., Evans R., Phillips K., Atkinson A., Cooper R., Jones C.,
Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P.,
Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K.,
Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G.,
Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D.,
Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G.,
Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J.,
Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H.,
Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L.,
Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J.,
Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R.,
Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D.,
Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G.,
Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M.,
Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J.,
Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M.,
Loveland J., Lovell J., Lush M.J., Lyne R., Martin S.,
Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S.,
Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N.,
Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V.,
Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J.,
Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E.,
Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C.,
Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z.,
Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E.,
Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A.,
Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R.,
Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V.,
Beck S., Rogers J., Bentley D.R.;
"The DNA sequence and biological annotation of human chromosome 1.";
Nature 441:315-321(2006).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Eye;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
PROTEIN SEQUENCE OF 2-11.
TISSUE=Platelet;
PubMed=12665801; DOI=10.1038/nbt810;
Gevaert K., Goethals M., Martens L., Van Damme J., Staes A.,
Thomas G.R., Vandekerckhove J.;
"Exploring proteomes and analyzing protein processing by mass
spectrometric identification of sorted N-terminal peptides.";
Nat. Biotechnol. 21:566-569(2003).
[8]
INTERACTION WITH AKAP1.
PubMed=11483602; DOI=10.1074/jbc.M103885200;
Furusawa M., Ohnishi T., Taira T., Iguchi-Ariga S.M.M., Ariga H.;
"AMY-1, a c-Myc-binding protein, is localized in the mitochondria of
sperm by association with S-AKAP84, an anchor protein of cAMP-
dependent protein kinase.";
J. Biol. Chem. 276:36647-36651(2001).
[9]
INTERACTION WITH MYCBPAP.
PubMed=12151104; DOI=10.1016/S0167-4781(02)00411-6;
Yukitake H., Furusawa M., Taira T., Iguchi-Ariga S.M.M., Ariga H.;
"AMAP-1, a novel testis-specific AMY-1-binding protein, is
differentially expressed during the course of spermatogenesis.";
Biochim. Biophys. Acta 1577:126-132(2002).
[10]
X-RAY CRYSTALLOGRAPHY (2.4 ANGSTROMS) OF 42-94.
RIKEN structural genomics initiative (RSGI);
"Crystal structure of c-myc-1 binding protein domain from Homo
sapiens.";
Submitted (APR-2008) to the PDB data bank.
-!- FUNCTION: May control the transcriptional activity of MYC.
Stimulates the activation of E box-dependent transcription by MYC.
-!- SUBUNIT: Binds via its C-terminal region to the N-terminal region
of MYC. Associates with AKAP1/S-AKAP84. Interacts with MYCBPAP.
{ECO:0000269|PubMed:11483602, ECO:0000269|PubMed:12151104}.
-!- INTERACTION:
Q92667-2:AKAP1; NbExp=2; IntAct=EBI-716185, EBI-2120060;
Q9Y6D6:ARFGEF1; NbExp=3; IntAct=EBI-716185, EBI-1044254;
Q9Y6D5:ARFGEF2; NbExp=5; IntAct=EBI-716185, EBI-2837511;
Q7Z4T9-4:MAATS1; NbExp=5; IntAct=EBI-716185, EBI-2119735;
Q8TBZ2:MYCBPAP; NbExp=4; IntAct=EBI-716185, EBI-1391585;
-!- SUBCELLULAR LOCATION: Cytoplasm. Nucleus. Mitochondrion.
Note=Translocates into the nucleus in the S phase of the cell
cycle upon an increase of MYC expression. Found in the
mitochondria when associated with AKAP1.
-!- TISSUE SPECIFICITY: Highly expressed in heart, placenta, pancreas,
skeletal muscle and kidney. Also present at low levels in lung.
-!- SIMILARITY: Belongs to the AMY1 family. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; D50692; BAA09338.1; -; mRNA.
EMBL; BT007109; AAP35773.1; -; mRNA.
EMBL; AB007191; BAA22408.1; -; mRNA.
EMBL; AB451287; BAG70101.1; -; mRNA.
EMBL; AB451419; BAG70233.1; -; mRNA.
EMBL; AK311886; BAG34827.1; -; mRNA.
EMBL; AL139260; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC008686; AAH08686.1; -; mRNA.
CCDS; CCDS431.1; -.
RefSeq; NP_036465.2; NM_012333.4.
UniGene; Hs.591506; -.
PDB; 2YY0; X-ray; 2.40 A; A/B/C/D=42-94.
PDBsum; 2YY0; -.
ProteinModelPortal; Q99417; -.
SMR; Q99417; -.
BioGrid; 117673; 41.
CORUM; Q99417; -.
IntAct; Q99417; 29.
MINT; Q99417; -.
STRING; 9606.ENSP00000380702; -.
iPTMnet; Q99417; -.
PhosphoSitePlus; Q99417; -.
BioMuta; MYCBP; -.
EPD; Q99417; -.
MaxQB; Q99417; -.
PaxDb; Q99417; -.
PeptideAtlas; Q99417; -.
PRIDE; Q99417; -.
ProteomicsDB; 78257; -.
TopDownProteomics; Q99417; -.
DNASU; 26292; -.
Ensembl; ENST00000397572; ENSP00000380702; ENSG00000214114.
GeneID; 26292; -.
KEGG; hsa:26292; -.
UCSC; uc001ccs.4; human.
CTD; 26292; -.
DisGeNET; 26292; -.
EuPathDB; HostDB:ENSG00000214114.8; -.
GeneCards; MYCBP; -.
HGNC; HGNC:7554; MYCBP.
HPA; HPA041188; -.
MIM; 606535; gene.
neXtProt; NX_Q99417; -.
OpenTargets; ENSG00000214114; -.
PharmGKB; PA31354; -.
eggNOG; ENOG410J2G0; Eukaryota.
eggNOG; ENOG41126S1; LUCA.
GeneTree; ENSGT00390000017974; -.
HOGENOM; HOG000260967; -.
HOVERGEN; HBG052546; -.
InParanoid; Q99417; -.
OrthoDB; EOG091G166C; -.
PhylomeDB; Q99417; -.
TreeFam; TF329224; -.
EvolutionaryTrace; Q99417; -.
GeneWiki; MYCBP; -.
GenomeRNAi; 26292; -.
PRO; PR:Q99417; -.
Proteomes; UP000005640; Chromosome 1.
Bgee; ENSG00000214114; -.
CleanEx; HS_MYCBP; -.
ExpressionAtlas; Q99417; baseline and differential.
Genevisible; Q99417; HS.
GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IDA:UniProtKB.
GO; GO:0007283; P:spermatogenesis; IEP:UniProtKB.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
InterPro; IPR026060; AMY1.
PANTHER; PTHR13168; PTHR13168; 1.
1: Evidence at protein level;
3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing;
Mitochondrion; Nucleus; Reference proteome; Transcription;
Transcription regulation.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:12665801}.
CHAIN 2 103 c-Myc-binding protein.
/FTId=PRO_0000220980.
CONFLICT 65 65 L -> V (in Ref. 1; BAA09338/BAA22408).
{ECO:0000305}.
HELIX 43 50 {ECO:0000244|PDB:2YY0}.
STRAND 51 54 {ECO:0000244|PDB:2YY0}.
HELIX 60 90 {ECO:0000244|PDB:2YY0}.
TURN 91 93 {ECO:0000244|PDB:2YY0}.
SEQUENCE 103 AA; 11967 MW; 72B9BD179A6808D0 CRC64;
MAHYKAADSK REQFRRYLEK SGVLDTLTKV LVALYEEPEK PNSALDFLKH HLGAATPENP
EIELLRLELA EMKEKYEAIV EENKKLKAKL AQYEPPQEEK RAE


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