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rRNA metabolism protein, SBDS family

 A0A0K1E338_9CREN        Unreviewed;       232 AA.
A0A0K1E338;
11-NOV-2015, integrated into UniProtKB/TrEMBL.
11-NOV-2015, sequence version 1.
25-OCT-2017, entry version 12.
SubName: Full=rRNA metabolism protein, SBDS family {ECO:0000313|EMBL:AKT35087.1};
ORFNames=PYWP30_01464 {ECO:0000313|EMBL:AKT35087.1};
Pyrobaculum sp. WP30.
Archaea; Crenarchaeota; Thermoprotei; Thermoproteales;
Thermoproteaceae; Pyrobaculum.
NCBI_TaxID=1227555 {ECO:0000313|EMBL:AKT35087.1};
[1] {ECO:0000313|EMBL:AKT35087.1, ECO:0000313|Proteomes:UP000062500}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=WP30 {ECO:0000313|EMBL:AKT35087.1,
ECO:0000313|Proteomes:UP000062500};
PubMed=26092468; DOI=10.1128/AEM.01095-15;
Jay Z.J., Beam J.P., Dohnalkova A., Lohmayer R., Bodle B.,
Planer-Friedrich B., Romine M., Inskeep W.P.;
"Pyrobaculum yellowstonensis Strain WP30 Respires on Elemental Sulfur
and/or Arsenate in Circumneutral Sulfidic Geothermal Sediments of
Yellowstone National Park.";
Appl. Environ. Microbiol. 81:5907-5916(2015).
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EMBL; CP012158; AKT35087.1; -; Genomic_DNA.
EnsemblBacteria; AKT35087; AKT35087; PYWP30_01464.
KEGG; pyw:PYWP30_01464; -.
PATRIC; fig|1227555.3.peg.1556; -.
KO; K14574; -.
OrthoDB; POG093Z0971; -.
Proteomes; UP000062500; Chromosome.
GO; GO:0042256; P:mature ribosome assembly; IEA:InterPro.
Gene3D; 3.30.1250.10; -; 1.
InterPro; IPR035647; EFG_III/V.
InterPro; IPR018978; Ribosome_mat_SBDS_C.
InterPro; IPR019783; Ribosome_mat_SBDS_N.
InterPro; IPR036786; Ribosome_mat_SBDS_N_sf.
InterPro; IPR002140; Sdo1/SBDS.
InterPro; IPR037188; Sdo1/SBDS_central_sf.
PANTHER; PTHR10927:SF1; PTHR10927:SF1; 1.
Pfam; PF01172; SBDS; 1.
Pfam; PF09377; SBDS_C; 1.
SUPFAM; SSF109728; SSF109728; 1.
SUPFAM; SSF54980; SSF54980; 1.
SUPFAM; SSF89895; SSF89895; 1.
TIGRFAMs; TIGR00291; RNA_SBDS; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000062500}.
DOMAIN 5 91 SBDS. {ECO:0000259|Pfam:PF01172}.
DOMAIN 98 211 SBDS_C. {ECO:0000259|Pfam:PF09377}.
SEQUENCE 232 AA; 25982 MW; 27F5F8F955891190 CRC64;
MTKKVAVAKL DKGGEHFEIL IDPDAALDYK TGKPLGIDKI LIHEEIYKDA KKGLRASEQT
LKKVFGTTDV RKIAETIIKE GEIPLTAEQR KKLIDEKKRQ IVEWISRNCI DVRTKTPVPP
QRVENALEQA RVAIDPFKSV EEQVQGILKE LQRVLPIKVA TARVAVSVSS TYAQKVKGLV
AKMAKIVNEK YRPDGSWEAL LELPAGLQDV LISRVNDATH GDVDIRIIEI VY


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