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ATM interactor (ATM/ATR-substrate CHK2-interacting zinc finger protein) (ASCIZ)

 ATMIN_MOUSE             Reviewed;         818 AA.
Q6P9S1; Q05CB1; Q80U05; Q8C311;
25-NOV-2008, integrated into UniProtKB/Swiss-Prot.
25-NOV-2008, sequence version 2.
16-JAN-2019, entry version 102.
RecName: Full=ATM interactor {ECO:0000312|EMBL:AAH60631.1};
AltName: Full=ATM/ATR-substrate CHK2-interacting zinc finger protein {ECO:0000250|UniProtKB:O43313};
Short=ASCIZ {ECO:0000250|UniProtKB:O43313};
Name=Atmin {ECO:0000312|MGI:MGI:2682328};
Synonyms=Kiaa0431 {ECO:0000312|EMBL:BAC65563.1};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1] {ECO:0000305}
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Brain {ECO:0000269|PubMed:17525732};
PubMed=17525732; DOI=10.1038/sj.emboj.7601733;
Kanu N., Behrens A.;
"ATMIN defines an NBS1-independent pathway of ATM signalling.";
EMBO J. 26:2933-2941(2007).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[3] {ECO:0000305, ECO:0000312|EMBL:AAH60631.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J {ECO:0000312|EMBL:AAH60631.1};
TISSUE=Brain {ECO:0000312|EMBL:AAH60631.1}, and
Mammary tumor {ECO:0000312|EMBL:AAH27752.1};
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4] {ECO:0000305, ECO:0000312|EMBL:BAC65563.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 29-818.
TISSUE=Brain {ECO:0000312|EMBL:BAC65563.1};
PubMed=12693553; DOI=10.1093/dnares/10.1.35;
Okazaki N., Kikuno R., Ohara R., Inamoto S., Aizawa H., Yuasa S.,
Nakajima D., Nagase T., Ohara O., Koga H.;
"Prediction of the coding sequences of mouse homologues of KIAA gene:
II. The complete nucleotide sequences of 400 mouse KIAA-homologous
cDNAs identified by screening of terminal sequences of cDNA clones
randomly sampled from size-fractionated libraries.";
DNA Res. 10:35-48(2003).
[5] {ECO:0000305, ECO:0000312|EMBL:BAC39849.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 220-818.
STRAIN=C57BL/6J {ECO:0000312|EMBL:BAC39849.1};
TISSUE=Lung {ECO:0000312|EMBL:BAC39849.1};
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[6]
FUNCTION.
PubMed=22167198; DOI=10.1074/jbc.M111.306019;
Jurado S., Conlan L.A., Baker E.K., Ng J.L., Tenis N., Hoch N.C.,
Gleeson K., Smeets M., Izon D., Heierhorst J.;
"ATM substrate Chk2-interacting Zn2+ finger (ASCIZ) Is a bi-functional
transcriptional activator and feedback sensor in the regulation of
dynein light chain (DYNLL1) expression.";
J. Biol. Chem. 287:3156-3164(2012).
-!- FUNCTION: Transcription factor. Plays a crucial role in cell
survival and RAD51 foci formation in response to methylating DNA
damage. Involved in regulating the activity of ATM in the absence
of DNA damage. May play a role in stabilizing ATM (By similarity).
Binds to the DYNLL1 promoter and activates its transcription.
{ECO:0000250, ECO:0000269|PubMed:22167198}.
-!- SUBUNIT: Interacts via its C-terminus with ATM. Interacts with
DYNLL; this interaction inhibits ATMIN transcriptional activity
and hence may play a role in a feedback loop whereby DYNLL1
inhibits transactivation of its own promoter by ATMIN. ATMIN.
{ECO:0000250}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250|UniProtKB:O43313}.
Note=Nuclear, in discrete foci during G1 phase.
{ECO:0000250|UniProtKB:O43313}.
-!- SEQUENCE CAUTION:
Sequence=AAH27752.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};
Sequence=AAH60631.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
Sequence=BAC39849.1; Type=Frameshift; Positions=222; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AC162858; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC027752; AAH27752.1; ALT_SEQ; mRNA.
EMBL; BC060631; AAH60631.1; ALT_INIT; mRNA.
EMBL; AK122281; BAC65563.1; -; mRNA.
EMBL; AK087334; BAC39849.1; ALT_FRAME; mRNA.
CCDS; CCDS22694.2; -.
RefSeq; NP_808368.3; NM_177700.4.
UniGene; Mm.259736; -.
ProteinModelPortal; Q6P9S1; -.
SMR; Q6P9S1; -.
STRING; 10090.ENSMUSP00000104727; -.
iPTMnet; Q6P9S1; -.
PhosphoSitePlus; Q6P9S1; -.
PaxDb; Q6P9S1; -.
PRIDE; Q6P9S1; -.
Ensembl; ENSMUST00000109099; ENSMUSP00000104727; ENSMUSG00000047388.
GeneID; 234776; -.
KEGG; mmu:234776; -.
UCSC; uc009nop.2; mouse.
CTD; 23300; -.
MGI; MGI:2682328; Atmin.
eggNOG; KOG1721; Eukaryota.
eggNOG; COG5048; LUCA.
GeneTree; ENSGT00390000013091; -.
HOGENOM; HOG000034178; -.
HOVERGEN; HBG106238; -.
InParanoid; Q6P9S1; -.
OMA; PVMQLAH; -.
OrthoDB; 583153at2759; -.
PhylomeDB; Q6P9S1; -.
TreeFam; TF331171; -.
PRO; PR:Q6P9S1; -.
Proteomes; UP000000589; Chromosome 8.
Bgee; ENSMUSG00000047388; Expressed in 274 organ(s), highest expression level in testis.
Genevisible; Q6P9S1; MM.
GO; GO:0016604; C:nuclear body; ISO:MGI.
GO; GO:0070840; F:dynein complex binding; ISO:MGI.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO; GO:0006974; P:cellular response to DNA damage stimulus; IEA:UniProtKB-KW.
GO; GO:0044458; P:motile cilium assembly; IMP:MGI.
GO; GO:0010628; P:positive regulation of gene expression; IDA:MGI.
GO; GO:1902857; P:positive regulation of non-motile cilium assembly; IMP:MGI.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IMP:UniProtKB.
InterPro; IPR013087; Znf_C2H2_type.
SMART; SM00355; ZnF_C2H2; 4.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
2: Evidence at transcript level;
Activator; Complete proteome; DNA damage; Metal-binding; Nucleus;
Reference proteome; Repeat; Transcription; Transcription regulation;
Zinc; Zinc-finger.
CHAIN 1 818 ATM interactor.
/FTId=PRO_0000355036.
ZN_FING 80 105 C2H2-type 1. {ECO:0000255}.
ZN_FING 161 181 C2H2-type 2; degenerate. {ECO:0000255}.
REGION 219 437 Required for formation of RAD51 foci.
{ECO:0000250}.
CONFLICT 1 3 MAA -> MGP (in Ref. 1). {ECO:0000305}.
CONFLICT 1 1 M -> TRP (in Ref. 3; AAH27752).
{ECO:0000305}.
SEQUENCE 818 AA; 87424 MW; F083B47FE0621B35 CRC64;
MAATEAAAAD SAGPAPGVPA TPASTRGAAA ASSPWRPPES RLQGSRPRPA RARAAAPVPP
ARELIQPTVS ELSRAVRTNI LCTVRGCGKI LPNSPALNMH LVKSHRLQDG IVNPTIRKDL
TTAPKFYCCP IKGCPRGPDR PFSQFSLVKQ HFMKMHAEKK HKCSKCSNSY GTEWDLKRHE
EDCGKTFQCT CGCPYASRTA LQSHIYRTGH EIPAEHRDPP SKKRKMESYL QNQKLSSKTT
EPLSDQAAPR QDAAEPDAPE VKPAASLEDS CSAHTKKQSV ATPPRCPQKL LLPKPKVALV
KLPVMQFSPV PVFVPTAESS AQPVVLGVDH SSAAGTVHLV PLSVGALILS LDSEACSLKE
SLPLSKIISP VVEPMNTGVQ VNLGKSLCSP LQEVGSVCQR TSISSSNVQT DLTYASANLI
PSAQWLGPDS SVSSCSQTDL SFDSQVSLPV SVHTQTLVPS SKVTSSIAAQ TDAFIDACFQ
PGGVSRETQT SRMQNRTNDS VPVGHTGLCG DIFESVHASY SVPTDTIMSS SLVAETGTHG
LPPQSDPKIL GQVMEKSAPV LNFSTQNGLL PAHTMTDNQT QTIDLLSDLE NILSSNLPGQ
TLDNRSLLSD TNPGPDAQLP AGSAQNSGID FDIEEFLSAS NIQTQTEESE LSSMSTEPVL
ESLDIETQTD VLLSDPSTQP YGFRAGSGFL GLEMFDTQTQ TDLNFFLDSS PHLPLGSILK
HSSFSMSTDS SDTETQTEGA CPARHLPALE SKVQLSSTET QTMSSGFEPL GNLFLTSNET
QTAMDDFLLA DLAWNTMESQ FSSVETQTCA ELHAVSSF


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Pathways :
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Related Genes :
[CHEK2 CDS1 CHK2 RAD53] Serine/threonine-protein kinase Chk2 (EC 2.7.11.1) (CHK2 checkpoint homolog) (Cds1 homolog) (Hucds1) (hCds1) (Checkpoint kinase 2)
[ATM] Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated) (A-T mutated)
[tefu atm CG6535] Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Telomere fusion protein)
[CHEK1 CHK1] Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Cell cycle checkpoint kinase) (Checkpoint kinase-1)
[PML MYL PP8675 RNF71 TRIM19] Protein PML (Promyelocytic leukemia protein) (RING finger protein 71) (Tripartite motif-containing protein 19)
[mei-41 CG4252] Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein homolog) (ATR homolog) (dATR) (Meiotic protein 41)
[BRCA1 RNF53] Breast cancer type 1 susceptibility protein (EC 2.3.2.27) (RING finger protein 53) (RING-type E3 ubiquitin transferase BRCA1)
[mus304 CG7347] ATR-interacting protein mus304 (Mutagen-sensitive protein 304)
[ATRIP AGS1] ATR-interacting protein (ATM and Rad3-related-interacting protein)
[CABIN1 KIAA0330] Calcineurin-binding protein cabin-1 (Calcineurin inhibitor) (CAIN)
[atl-1 T06E4.3] Serine/threonine-protein kinase ATR (EC 2.7.11.1) (ATM-like protein 1) (Ataxia telangiectasia and Rad3-related protein homolog) (ATR homolog) (Ce-atl-1)
[chek1 chk1] Serine/threonine-protein kinase Chk1 (EC 2.7.11.1) (CHK1 checkpoint homolog) (Checkpoint kinase-1) (xChk1)
[SIRT1 SIR2L1] NAD-dependent protein deacetylase sirtuin-1 (hSIRT1) (EC 3.5.1.-) (Regulatory protein SIR2 homolog 1) (SIR2-like protein 1) (hSIR2) [Cleaved into: SirtT1 75 kDa fragment (75SirT1)]
[TRIM28 KAP1 RNF96 TIF1B] Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (Nuclear corepressor KAP-1) (RING finger protein 96) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)
[BRCA2 FACD FANCD1] Breast cancer type 2 susceptibility protein (Fanconi anemia group D1 protein)
[DYNLL1 DLC1 DNCL1 DNCLC1 HDLC1] Dynein light chain 1, cytoplasmic (8 kDa dynein light chain) (DLC8) (Dynein light chain LC8-type 1) (Protein inhibitor of neuronal nitric oxide synthase) (PIN)
[BRAT1 BAAT1 C7orf27] BRCA1-associated ATM activator 1 (BRCA1-associated protein required for ATM activation protein 1)
[grp CG17161] Serine/threonine-protein kinase grp (EC 2.7.11.1) (Chk1 homolog) (Protein grapes)
[Atm] Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
[ZRANB2 ZIS ZNF265] Zinc finger Ran-binding domain-containing protein 2 (Zinc finger protein 265) (Zinc finger, splicing)
[ZNF335] Zinc finger protein 335 (NRC-interacting factor 1) (NIF-1)
[ATM] Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia telangiectasia mutated homolog) (A-T mutated homolog)
[BAZ2A KIAA0314 TIP5] Bromodomain adjacent to zinc finger domain protein 2A (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3)
[PLK3 CNK FNK PRK] Serine/threonine-protein kinase PLK3 (EC 2.7.11.21) (Cytokine-inducible serine/threonine-protein kinase) (FGF-inducible kinase) (Polo-like kinase 3) (PLK-3) (Proliferation-related kinase)
[ATR FRP1] Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia telangiectasia and Rad3-related protein) (FRAP-related protein 1)
[ZBTB18 RP58 TAZ1 ZNF238] Zinc finger and BTB domain-containing protein 18 (58 kDa repressor protein) (Transcriptional repressor RP58) (Translin-associated zinc finger protein 1) (TAZ-1) (Zinc finger protein 238) (Zinc finger protein C2H2-171)
[Atm Atm_mapped rCG_58300] Serine-protein kinase ATM (EC 2.7.11.1)
[KMT2A ALL1 CXXC7 HRX HTRX MLL MLL1 TRX1] Histone-lysine N-methyltransferase 2A (Lysine N-methyltransferase 2A) (EC 2.1.1.43) (ALL-1) (CXXC-type zinc finger protein 7) (Myeloid/lymphoid or mixed-lineage leukemia) (Myeloid/lymphoid or mixed-lineage leukemia protein 1) (Trithorax-like protein) (Zinc finger protein HRX) [Cleaved into: MLL cleavage product N320 (N-terminal cleavage product of 320 kDa) (p320); MLL cleavage product C180 (C-terminal cleavage product of 180 kDa) (p180)]
[ZFPM1 FOG1 ZFN89A] Zinc finger protein ZFPM1 (Friend of GATA protein 1) (FOG-1) (Friend of GATA 1) (Zinc finger protein 89A) (Zinc finger protein multitype 1)
[CIZ1 LSFR1 NP94 ZNF356] Cip1-interacting zinc finger protein (CDKN1A-interacting zinc finger protein 1) (Nuclear protein NP94) (Zinc finger protein 356)

Bibliography :
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