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BPI fold-containing family A member 1 (Palate lung and nasal epithelium clone protein)

 BPIA1_MOUSE             Reviewed;         278 AA.
P97361; Q7TQJ2;
18-OCT-2001, integrated into UniProtKB/Swiss-Prot.
26-APR-2004, sequence version 3.
13-FEB-2019, entry version 129.
RecName: Full=BPI fold-containing family A member 1;
AltName: Full=Palate lung and nasal epithelium clone protein;
Flags: Precursor;
Name=Bpifa1; Synonyms=Plunc, Splunc1;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND REPEAT.
STRAIN=ICR; TISSUE=Palate;
PubMed=10224143; DOI=10.1074/jbc.274.19.13698;
Weston W.M., LeClair E.E., Trzyna W., McHugh K.M., Nugent P.,
Lafferty C.M., Ma L., Tuan R.S., Greene R.M.;
"Differential display identification of plunc, a novel gene expressed
in embryonic palate, nasal epithelium, and adult lung.";
J. Biol. Chem. 274:13698-13703(1999).
[2]
ERRATUM.
Weston W.M., LeClair E.E., Trzyna W., McHugh K.M., Nugent P.,
Lafferty C.M., Ma L., Tuan R.S., Greene R.M.;
J. Biol. Chem. 275:8262-8262(2000).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], TISSUE SPECIFICITY, AND
DEVELOPMENTAL STAGE.
STRAIN=129/Sv;
PubMed=11396972; DOI=10.1006/bbrc.2001.5024;
LeClair E.E., Nguyen L., Bingle L., MacGowan A., Singleton V.,
Ward S.J., Bingle C.D.;
"Genomic organization of the mouse plunc gene and expression in the
developing airways and thymus.";
Biochem. Biophys. Res. Commun. 284:792-797(2001).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Olfactory epithelium;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
FUNCTION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
PubMed=23499554; DOI=10.1016/j.ajpath.2013.01.050;
Liu Y., Bartlett J.A., Di M.E., Bomberger J.M., Chan Y.R., Gakhar L.,
Mallampalli R.K., McCray P.B. Jr., Di Y.P.;
"SPLUNC1/BPIFA1 contributes to pulmonary host defense against
Klebsiella pneumoniae respiratory infection.";
Am. J. Pathol. 182:1519-1531(2013).
[6]
X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 38-278, AND DISULFIDE BOND.
PubMed=29717993; DOI=10.1107/S2053230X18004600;
Little M.S., Redinbo M.R.;
"Crystal structure of the mouse innate immunity factor bacterial
permeability-increasing family member A1.";
Acta Crystallogr. F Struct. Biol. Commun. 74:268-276(2018).
-!- FUNCTION: Lipid-binding protein which shows high specificity for
the surfactant phospholipid dipalmitoylphosphatidylcholine (DPPC)
(By similarity). Plays a role in the innate immune responses of
the upper airways (PubMed:23499554). Reduces the surface tension
in secretions from airway epithelia and inhibits the formation of
biofilm by pathogenic Gram-negative bacteria, such as P.aeruginosa
and K.pneumoniae (PubMed:23499554). Negatively regulates
proteolytic cleavage of SCNN1G, an event that is required for
activation of the epithelial sodium channel (ENaC), and thereby
contributes to airway surface liquid homeostasis and proper
clearance of mucus (By similarity). Plays a role in the airway
inflammatory response after exposure to irritants (By similarity).
May attract macrophages and neutrophils (By similarity).
{ECO:0000250|UniProtKB:Q9NP55, ECO:0000269|PubMed:23499554}.
-!- SUBUNIT: Monomer. Interacts (via N-terminus) with SCNN1B, a
subunit of the heterotrimeric epithelial sodium channel (ENaC);
this inhibits proteolytic activation of ENaC (By similarity).
{ECO:0000250}.
-!- SUBCELLULAR LOCATION: Secreted {ECO:0000269|PubMed:23499554}.
Note=Apical side of airway epithelial cells. Detected in airway
surface liquid, nasal mucus and sputum.
-!- TISSUE SPECIFICITY: Detected in airway epithelia (trachea and
lung) and in bronchoalveolar fluid (at protein level). Upper
airways, nasopharyngeal epithelium and thymus. Highest expression
in the trachea and progressive decrease from proximal (bronchial)
to distal (bronchiolar) airways. No expression is detected in the
terminal bronchioles, respiratory bronchioles or lung alveoli.
{ECO:0000269|PubMed:10224143, ECO:0000269|PubMed:11396972,
ECO:0000269|PubMed:23499554}.
-!- DEVELOPMENTAL STAGE: First detected at 14.5 dpc in the
nasopharyngeal epithelium and persists there into adulthood. In
the thymus, weak expression is detected at 16.5 dpc and appears to
be restricted to epithelial cells lining the medullary venules.
This pattern of thymic expression persists until birth and into
early postnatal life but is greatly decreased in the adult thymus.
No expression is detected in the lung until 2 days after birth,
after which expression is detected in cells lining the trachea.
{ECO:0000269|PubMed:11396972}.
-!- SIMILARITY: Belongs to the BPI/LBP/Plunc superfamily. Plunc
family. {ECO:0000305}.
-!- CAUTION: Reported to bind to bacterial lipopolysaccharide (LPS) in
vitro. However, the in vivo significance of this is uncertain
since other studies indicate little or no specificity for LPS.
{ECO:0000250|UniProtKB:Q9NP55}.
-----------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; U69172; AAB63256.1; -; mRNA.
EMBL; AF356785; AAK63069.1; -; Genomic_DNA.
EMBL; BC054375; AAH54375.1; -; mRNA.
CCDS; CCDS16925.1; -.
RefSeq; NP_035256.2; NM_011126.3.
UniGene; Mm.268852; -.
PDB; 6BAQ; X-ray; 2.50 A; A/B/C/D/E/F/G/H=38-278.
PDBsum; 6BAQ; -.
ProteinModelPortal; P97361; -.
SMR; P97361; -.
IntAct; P97361; 1.
MINT; P97361; -.
STRING; 10090.ENSMUSP00000028985; -.
PhosphoSitePlus; P97361; -.
MaxQB; P97361; -.
PaxDb; P97361; -.
PeptideAtlas; P97361; -.
PRIDE; P97361; -.
Ensembl; ENSMUST00000028985; ENSMUSP00000028985; ENSMUSG00000027483.
GeneID; 18843; -.
KEGG; mmu:18843; -.
UCSC; uc008niu.2; mouse.
CTD; 51297; -.
MGI; MGI:1338036; Bpifa1.
eggNOG; ENOG410IWYF; Eukaryota.
eggNOG; ENOG41114MD; LUCA.
GeneTree; ENSGT00940000153099; -.
HOGENOM; HOG000231510; -.
HOVERGEN; HBG045573; -.
InParanoid; P97361; -.
OMA; QGKVCPL; -.
OrthoDB; 1275829at2759; -.
PhylomeDB; P97361; -.
TreeFam; TF337052; -.
Reactome; R-MMU-6803157; Antimicrobial peptides.
PRO; PR:P97361; -.
Proteomes; UP000000589; Chromosome 2.
Bgee; ENSMUSG00000027483; Expressed in 47 organ(s), highest expression level in trachea.
Genevisible; P97361; MM.
GO; GO:0005576; C:extracellular region; ISS:UniProtKB.
GO; GO:0005615; C:extracellular space; ISS:UniProtKB.
GO; GO:0005902; C:microvillus; ISO:MGI.
GO; GO:0008289; F:lipid binding; IEA:InterPro.
GO; GO:0019731; P:antibacterial humoral response; IMP:UniProtKB.
GO; GO:0045087; P:innate immune response; IMP:UniProtKB.
GO; GO:0050891; P:multicellular organismal water homeostasis; ISS:UniProtKB.
GO; GO:1900229; P:negative regulation of single-species biofilm formation in or on host organism; IMP:UniProtKB.
GO; GO:0050828; P:regulation of liquid surface tension; ISS:UniProtKB.
GO; GO:1902305; P:regulation of sodium ion transmembrane transport; ISS:UniProtKB.
InterPro; IPR017943; Bactericidal_perm-incr_a/b_dom.
InterPro; IPR032942; BPI/LBP/Plunc.
InterPro; IPR034307; BPIFA1.
InterPro; IPR017942; Lipid-bd_serum_glycop_N.
PANTHER; PTHR10504; PTHR10504; 1.
PANTHER; PTHR10504:SF70; PTHR10504:SF70; 1.
Pfam; PF01273; LBP_BPI_CETP; 1.
SUPFAM; SSF55394; SSF55394; 1.
1: Evidence at protein level;
3D-structure; Antibiotic; Antimicrobial; Complete proteome;
Disulfide bond; Glycoprotein; Immunity; Innate immunity;
Lipid-binding; Reference proteome; Repeat; Secreted; Signal.
SIGNAL 1 19 {ECO:0000255}.
CHAIN 20 278 BPI fold-containing family A member 1.
/FTId=PRO_0000017176.
REPEAT 23 28 Repeat 1. {ECO:0000305|PubMed:10224143}.
REPEAT 30 36 Repeat 2. {ECO:0000305|PubMed:10224143}.
REPEAT 39 44 Repeat 3. {ECO:0000305|PubMed:10224143}.
REPEAT 47 52 Repeat 4. {ECO:0000305|PubMed:10224143}.
REGION 23 52 4 X 6 AA repeats of G-[LPQ]-[PL]-L-P-L.
{ECO:0000305|PubMed:10224143}.
REGION 112 117 Important for surfactant activity and
antibacterial properties.
{ECO:0000250|UniProtKB:Q9NP55}.
CARBOHYD 182 182 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 228 228 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 204 246 {ECO:0000244|PDB:6BAQ,
ECO:0000269|PubMed:29717993}.
HELIX 68 71 {ECO:0000244|PDB:6BAQ}.
HELIX 72 86 {ECO:0000244|PDB:6BAQ}.
HELIX 89 94 {ECO:0000244|PDB:6BAQ}.
HELIX 98 103 {ECO:0000244|PDB:6BAQ}.
HELIX 112 120 {ECO:0000244|PDB:6BAQ}.
HELIX 124 128 {ECO:0000244|PDB:6BAQ}.
STRAND 132 140 {ECO:0000244|PDB:6BAQ}.
STRAND 144 147 {ECO:0000244|PDB:6BAQ}.
STRAND 151 167 {ECO:0000244|PDB:6BAQ}.
HELIX 169 171 {ECO:0000244|PDB:6BAQ}.
STRAND 175 191 {ECO:0000244|PDB:6BAQ}.
STRAND 197 206 {ECO:0000244|PDB:6BAQ}.
STRAND 212 215 {ECO:0000244|PDB:6BAQ}.
STRAND 223 226 {ECO:0000244|PDB:6BAQ}.
HELIX 227 254 {ECO:0000244|PDB:6BAQ}.
HELIX 258 269 {ECO:0000244|PDB:6BAQ}.
SEQUENCE 278 AA; 28625 MW; 2540BED994475387 CRC64;
MFLVGSLVVL CGLLAHSTAQ LAGLPLPLGQ GPPLPLNQGP PLPLNQGQLL PLAQGLPLAV
SPALPSNPTD LLAGKFTDAL SGGLLSGGLL GILENIPLLD VIKSGGGNSN GLVGGLLGKL
TSSVPLLNNI LDIKITDPQL LELGLVQSPD GHRLYVTIPL GLTLNVNMPV VGSLLQLAVK
LNITAEVLAV KDNQGRIHLV LGDCTHSPGS LKISLLNGVT PVQSFLDNLT GILTKVLPEL
IQGKVCPLVN GILSGLDVTL VHNIAELLIH GLQFVIKV


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Pathways :
WP1661: Glyoxylate and dicarboxylate metabolism
WP1909: Signal regulatory protein (SIRP) family interactions
WP1049: G Protein Signaling Pathways
WP1165: G Protein Signaling Pathways
WP1371: G Protein Signaling Pathways
WP1438: Influenza A virus infection
WP1485: Interactions between CFTR and other ion channels
WP1487: TNF-alpha and mucus production in lung epythelium
WP1493: Carbon assimilation C4 pathway
WP1502: Mitochondrial biogenesis
WP1531: Vitamin D synthesis
WP1566: Citrate cycle (TCA cycle)
WP1613: 1,4-Dichlorobenzene degradation
WP1616: ABC transporters
WP1624: Bacterial secretion system
WP1625: Base excision repair
WP1644: DNA replication
WP1650: Fluorobenzoate degradation
WP1654: gamma-Hexachlorocyclohexane degradation
WP1657: Glycerolipid metabolism
WP1659: Glycine, serine and threonine metabolism
WP1663: Homologous recombination
WP1665: Limonene and pinene degradation
WP1672: Mismatch repair
WP1673: Naphthalene and anthracene degradation

Related Genes :
[BPIFA1 LUNX NASG PLUNC SPLUNC1 SPURT UNQ787/PRO1606] BPI fold-containing family A member 1 (Lung-specific protein X) (Nasopharyngeal carcinoma-related protein) (Palate lung and nasal epithelium clone protein) (Secretory protein in upper respiratory tracts) (Short PLUNC1) (SPLUNC1) (Tracheal epithelium-enriched protein) (Von Ebner protein Hl)
[Bpifa1 Plunc Splunc1] BPI fold-containing family A member 1 (Palate lung and nasal epithelium clone protein)
[Bpifa1 Plunc] BPI fold-containing family A member 1 (Palate lung and nasal epithelium clone protein)
[BPIFA1 PLUNC SPLUNC1] BPI fold-containing family A member 1 (Lung and nasal epithelium carcinoma-associated protein) (Palate lung and nasal epithelium clone protein)
[BPIFA1 PLUNC] BPI fold-containing family A member 1 (Palate lung and nasal epithelium clone protein)
[BPIFB4 C20orf186 LPLUNC4] BPI fold-containing family B member 4 (Ligand-binding protein RY2G5) (Long palate, lung and nasal epithelium carcinoma-associated protein 4)
[BPIFB3 C20orf185 LPLUNC3] BPI fold-containing family B member 3 (Ligand-binding protein RYA3) (Long palate, lung and nasal epithelium carcinoma-associated protein 3)
[Bpifb3 Lplunc3 Rya3] BPI fold-containing family B member 3 (Ligand-binding protein RYA3) (Long palate, lung and nasal epithelium carcinoma-associated protein 3)
[Bpifb4 Lplunc4 Ry2g5] BPI fold-containing family B member 4 (Ligand-binding protein RY2G5) (Long palate, lung and nasal epithelium carcinoma-associated protein 4)
[Bpifb4 Gm1006 Lplunc4] BPI fold-containing family B member 4 (Long palate, lung and nasal epithelium carcinoma-associated protein 4)
[Bpifb3 Lplunc3 Rya3] BPI fold-containing family B member 3 (Ligand-binding protein RYA3) (Long palate, lung and nasal epithelium carcinoma-associated protein 3)
[] Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
[NSMF NELF] NMDA receptor synaptonuclear signaling and neuronal migration factor (Nasal embryonic luteinizing hormone-releasing hormone factor) (Nasal embryonic LHRH factor)
[SLC46A1 HCP1 PCFT] Proton-coupled folate transporter (G21) (Heme carrier protein 1) (PCFT/HCP1) (Solute carrier family 46 member 1)
[FGFR1 BFGFR CEK FGFBR FLG FLT2 HBGFR] Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (BFGFR) (bFGF-R-1) (Fms-like tyrosine kinase 2) (FLT-2) (N-sam) (Proto-oncogene c-Fgr) (CD antigen CD331)
[Elf3 Ert Esx Jen] ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1)
[CLCA1 CACC1] Calcium-activated chloride channel regulator 1 (EC 3.4.-.-) (Calcium-activated chloride channel family member 1) (hCLCA1) (Calcium-activated chloride channel protein 1) (CaCC-1) (hCaCC-1)
[SERPINF1 PEDF PIG35] Pigment epithelium-derived factor (PEDF) (Cell proliferation-inducing gene 35 protein) (EPC-1) (Serpin F1)
[ALDH3A1 ALDH3] Aldehyde dehydrogenase, dimeric NADP-preferring (EC 1.2.1.5) (ALDHIII) (Aldehyde dehydrogenase 3) (Aldehyde dehydrogenase family 3 member A1)
[SLC22A18 BWR1A BWSCR1A HET IMPT1 ITM ORCTL2 SLC22A1L TSSC5] Solute carrier family 22 member 18 (Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein) (Efflux transporter-like protein) (Imprinted multi-membrane-spanning polyspecific transporter-related protein 1) (Organic cation transporter-like protein 2) (ORCTL-2) (Solute carrier family 22 member 1-like) (Tumor-suppressing STF cDNA 5 protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein) (p45-Beckwith-Wiedemann region 1 A) (p45-BWR1A)
[SLAMF7 CS1 UNQ576/PRO1138] SLAM family member 7 (CD2 subset 1) (CD2-like receptor-activating cytotoxic cells) (CRACC) (Membrane protein FOAP-12) (Novel Ly9) (Protein 19A) (CD antigen CD319)
[DDR1 CAK EDDR1 NEP NTRK4 PTK3A RTK6 TRKE] Epithelial discoidin domain-containing receptor 1 (Epithelial discoidin domain receptor 1) (EC 2.7.10.1) (CD167 antigen-like family member A) (Cell adhesion kinase) (Discoidin receptor tyrosine kinase) (HGK2) (Mammary carcinoma kinase 10) (MCK-10) (Protein-tyrosine kinase 3A) (Protein-tyrosine kinase RTK-6) (TRK E) (Tyrosine kinase DDR) (Tyrosine-protein kinase CAK) (CD antigen CD167a)
[nef] Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
[] Genome polyprotein [Cleaved into: Peptide 2k; Capsid protein C (Core protein); Protein prM; Peptide pr; Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (NS5)]
[SCNN1A SCNN1] Amiloride-sensitive sodium channel subunit alpha (Alpha-NaCH) (Epithelial Na(+) channel subunit alpha) (Alpha-ENaC) (ENaCA) (Nonvoltage-gated sodium channel 1 subunit alpha) (SCNEA)
[SCARF2 SREC2 SREPCR] Scavenger receptor class F member 2 (SRECRP-1) (Scavenger receptor expressed by endothelial cells 2 protein) (SREC-II)
[Sirpa Bit Myd1 Ptpns1 Shps1 Sirp] Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (MyD-1 antigen) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (mSIRP-alpha1) (p84) (CD antigen CD172a)
[YIPF5 FINGER5 YIP1A PP12723 SB140 UNQ3123/PRO10275] Protein YIPF5 (Five-pass transmembrane protein localizing in the Golgi apparatus and the endoplasmic reticulum 5) (Smooth muscle cell-associated protein 5) (SMAP-5) (YIP1 family member 5) (YPT-interacting protein 1 A)
[FGFR2 BEK KGFR KSAM] Fibroblast growth factor receptor 2 (FGFR-2) (EC 2.7.10.1) (K-sam) (KGFR) (Keratinocyte growth factor receptor) (CD antigen CD332)
[Smad4 Dpc4 Madh4] Mothers against decapentaplegic homolog 4 (MAD homolog 4) (Mothers against DPP homolog 4) (Deletion target in pancreatic carcinoma 4 homolog) (SMAD family member 4) (SMAD 4) (Smad4)

Bibliography :
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