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Bifunctional lycopene cyclase/phytoene synthase (Protein albino-2) [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Carotene cyclase) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]

 LCPS_NEUCR              Reviewed;         602 AA.
P37295; Q7RVN3;
01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
01-OCT-1994, sequence version 1.
16-JAN-2019, entry version 115.
RecName: Full=Bifunctional lycopene cyclase/phytoene synthase;
AltName: Full=Protein albino-2;
Includes:
RecName: Full=Lycopene beta-cyclase;
EC=5.5.1.19;
AltName: Full=Carotene cyclase;
AltName: Full=Lycopene cyclase;
Includes:
RecName: Full=Phytoene synthase;
EC=2.5.1.32;
Name=al-2; ORFNames=B22I21.230, NCU00585;
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM
1257 / FGSC 987).
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae;
Neurospora.
NCBI_TaxID=367110;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=8163509;
Schmidhauser T.J., Lauter F.-R., Schumacher M., Zhou W., Russo V.E.A.,
Yanofsky C.;
"Characterization of al-2, the phytoene synthase gene of Neurospora
crassa. Cloning, sequence analysis, and photoregulation.";
J. Biol. Chem. 269:12060-12066(1994).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=12655011; DOI=10.1093/nar/gkg293;
Mannhaupt G., Montrone C., Haase D., Mewes H.-W., Aign V.,
Hoheisel J.D., Fartmann B., Nyakatura G., Kempken F., Maier J.,
Schulte U.;
"What's in the genome of a filamentous fungus? Analysis of the
Neurospora genome sequence.";
Nucleic Acids Res. 31:1944-1954(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=12712197; DOI=10.1038/nature01554;
Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D.,
Jaffe D.B., FitzHugh W., Ma L.-J., Smirnov S., Purcell S., Rehman B.,
Elkins T., Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M.,
Qui D., Ianakiev P., Bell-Pedersen D., Nelson M.A.,
Werner-Washburne M., Selitrennikoff C.P., Kinsey J.A., Braun E.L.,
Zelter A., Schulte U., Kothe G.O., Jedd G., Mewes H.-W., Staben C.,
Marcotte E., Greenberg D., Roy A., Foley K., Naylor J.,
Stange-Thomann N., Barrett R., Gnerre S., Kamal M., Kamvysselis M.,
Mauceli E.W., Bielke C., Rudd S., Frishman D., Krystofova S.,
Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S., Cogoni C.,
Macino G., Catcheside D.E.A., Li W., Pratt R.J., Osmani S.A.,
DeSouza C.P.C., Glass N.L., Orbach M.J., Berglund J.A., Voelker R.,
Yarden O., Plamann M., Seiler S., Dunlap J.C., Radford A., Aramayo R.,
Natvig D.O., Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M.,
Paulsen I., Sachs M.S., Lander E.S., Nusbaum C., Birren B.W.;
"The genome sequence of the filamentous fungus Neurospora crassa.";
Nature 422:859-868(2003).
[4]
FUNCTION, AND MUTAGENESIS OF TRP-189 AND LYS-208.
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=11862485; DOI=10.1007/s00438-001-0626-5;
Arrach N., Schmidhauser T.J., Avalos J.;
"Mutants of the carotene cyclase domain of al-2 from Neurospora
crassa.";
Mol. Genet. Genomics 266:914-921(2002).
[5]
FUNCTION.
PubMed=16928467; DOI=10.1016/j.bbalip.2006.06.002;
Sandmann G., Zhu C., Krubasik P., Fraser P.D.;
"The biotechnological potential of the al-2 gene from Neurospora
crassa for the production of monocyclic keto hydroxy carotenoids.";
Biochim. Biophys. Acta 1761:1085-1092(2006).
-!- FUNCTION: Bifunctional enzyme that catalyzes the reactions from
geranylgeranyl diphosphate to phytoene (phytoene synthase) and
from lycopene to beta-carotene via the intermediate gamma-carotene
and from 3,4-didehydrolycopene to torulene (lycopene cyclase).
Torulene is further processed to the acidic carotenoid
neurosporaxanthin. The cyclase preferentially catalyzes single
cyclizations at only one end of the substrate to produce
monocyclic carotenoids. {ECO:0000269|PubMed:11862485,
ECO:0000269|PubMed:16928467}.
-!- CATALYTIC ACTIVITY:
Reaction=a carotenoid psi-end group = a carotenoid beta-end
derivative; Xref=Rhea:RHEA:55620, ChEBI:CHEBI:139114,
ChEBI:CHEBI:139120; EC=5.5.1.19;
-!- CATALYTIC ACTIVITY:
Reaction=2 all-trans-geranylgeranyl diphosphate = 15-cis-phytoene
+ 2 diphosphate; Xref=Rhea:RHEA:34475, ChEBI:CHEBI:27787,
ChEBI:CHEBI:33019, ChEBI:CHEBI:58756; EC=2.5.1.32;
-!- PATHWAY: Carotenoid biosynthesis; beta-carotene biosynthesis.
-!- PATHWAY: Carotenoid biosynthesis; phytoene biosynthesis; all-
trans-phytoene from geranylgeranyl diphosphate: step 1/1.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
protein {ECO:0000305}.
-!- INDUCTION: By blue light.
-!- SIMILARITY: In the N-terminal section; belongs to the lycopene
beta-cyclase family. {ECO:0000305}.
-!- SIMILARITY: In the C-terminal section; belongs to the
phytoene/squalene synthase family. {ECO:0000305}.
-----------------------------------------------------------------------
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-----------------------------------------------------------------------
EMBL; L27652; AAA19428.1; -; Genomic_DNA.
EMBL; BX842641; CAE76609.1; -; Genomic_DNA.
EMBL; CM002236; EAA36489.3; -; Genomic_DNA.
PIR; A53583; A53583.
RefSeq; XP_965725.3; XM_960632.3.
ProteinModelPortal; P37295; -.
PRIDE; P37295; -.
EnsemblFungi; EAA36489; EAA36489; NCU00585.
GeneID; 3881954; -.
KEGG; ncr:NCU00585; -.
EuPathDB; FungiDB:NCU00585; -.
InParanoid; P37295; -.
KO; K17841; -.
BioCyc; MetaCyc:MONOMER-16129; -.
UniPathway; UPA00799; UER00773.
UniPathway; UPA00802; -.
Proteomes; UP000001805; Chromosome 1, Linkage Group I.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0004310; F:farnesyl-diphosphate farnesyltransferase activity; IEA:InterPro.
GO; GO:0016767; F:geranylgeranyl-diphosphate geranylgeranyltransferase activity; IDA:UniProtKB.
GO; GO:0016872; F:intramolecular lyase activity; IEA:InterPro.
GO; GO:0045436; F:lycopene beta cyclase activity; IDA:UniProtKB.
GO; GO:0046905; F:phytoene synthase activity; IDA:UniProtKB.
GO; GO:0051996; F:squalene synthase activity; IEA:InterPro.
GO; GO:0016120; P:carotene biosynthetic process; IDA:UniProtKB.
GO; GO:0016117; P:carotenoid biosynthetic process; IBA:GO_Central.
GO; GO:0006696; P:ergosterol biosynthetic process; IEA:InterPro.
CDD; cd00683; Trans_IPPS_HH; 1.
Gene3D; 1.10.600.10; -; 1.
InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
InterPro; IPR017825; Lycopene_cyclase_dom.
InterPro; IPR019845; Squalene/phytoene_synthase_CS.
InterPro; IPR033904; Trans_IPPS_HH.
SUPFAM; SSF48576; SSF48576; 1.
TIGRFAMs; TIGR03462; CarR_dom_SF; 2.
PROSITE; PS01044; SQUALEN_PHYTOEN_SYN_1; 1.
PROSITE; PS01045; SQUALEN_PHYTOEN_SYN_2; 1.
1: Evidence at protein level;
Carotenoid biosynthesis; Complete proteome; Isomerase; Membrane;
Multifunctional enzyme; Reference proteome; Transferase;
Transmembrane; Transmembrane helix.
CHAIN 1 602 Bifunctional lycopene cyclase/phytoene
synthase.
/FTId=PRO_0000067440.
TRANSMEM 6 26 Helical. {ECO:0000255}.
TRANSMEM 30 50 Helical. {ECO:0000255}.
TRANSMEM 76 96 Helical. {ECO:0000255}.
TRANSMEM 118 138 Helical. {ECO:0000255}.
TRANSMEM 146 166 Helical. {ECO:0000255}.
TRANSMEM 168 188 Helical. {ECO:0000255}.
TRANSMEM 230 250 Helical. {ECO:0000255}.
REGION 1 241 Lycopene beta-cyclase.
REGION 248 602 Phytoene synthase.
MUTAGEN 189 189 W->R: In JA26; Abolishes lycopene cyclase
activity and accumulates a polar
precursor carotenoid of
neurosporaxanthin.
{ECO:0000269|PubMed:11862485}.
MUTAGEN 208 208 K->E: In JA28; Abolishes lycopene cyclase
activity and accumulates a polar
precursor carotenoid of
neurosporaxanthin.
{ECO:0000269|PubMed:11862485}.
SEQUENCE 602 AA; 68928 MW; DDFFBD725007E5C2 CRC64;
MYDYAFVHLK FTVPAAVLLT AIAYPILNRI HLIQTGFLVV VAFTAALPWD AYLIKHKVWS
YPPEAIVGPR LLGIPFEELF FFVIQTYITA LVYILFNKPV LHALHLNNQQ NPPAWMRVVK
VTGQVVLVAL SVWGWNAAQV HQETSYLGLI LVWACPFLLA IWTLAGRFIL SLPWYATVLP
MFLPTFYLWA VDEFALHRGT WSIGSGTKLD FCLFGKLDIE EATFFLVTNM LIVGGMAAFD
QYLAVIYAFP TLFPKVNRYP TTHMLLQSRL INTSRYDLER IEGLREAVER LRLKSRSFYL
ANSLFSGRLR IDLILLYSFC RLADDLVDDA KSRREVLSWT AKLNHFLDLH YKDADATEDP
KKKAERIDAY IKTAFPPCAY QALHLLPTHI LPPKPLYDLI KGFEMDSQFT FHGTSDSTDL
QYPIADDKDL ENYAIYVAGT VGELCIALII YHCLPDMSDT QKRELETAAC RMGIALQYVN
IARDIVVDAR IGRVYLPTTW LKKEGLTHKM VLENPEGPEV IERMRRRLLE NAFELYGGAR
PEMQRIPSEA RGPMIGAVEN YMAIGRVLRE RKEGTVFVRM EGRATVPKRR RLSTLLRALY
EQ


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Pathways :
WP668: Octadecanoid Pathway
WP1693: Purine metabolism
WP2199: Seed Development
WP2204: Lycopene biosynthesis
WP1403: AMPK signaling
WP1422: Sphingolipid Metabolism
WP1423: Ganglio Sphingolipid Metabolism
WP1424: Globo Sphingolipid Metabolism
WP1461: Photosynthetic Carbon Reduction
WP1566: Citrate cycle (TCA cycle)
WP1621: Arginine and proline metabolism
WP1689: Porphyrin and chlorophyll metabolism
WP1708: Terpenoid backbone biosynthesis
WP210: Cytoplasmic Ribosomal Proteins
WP2208: Cardiolipin Biosynthesis
WP2210: Oryzalexin S biosynthesis
WP2211: Geranylgeranyldiphosphate biosynthesis II (plastidic)
WP2218: sGC
WP2248: anthocyanin biosynthesis
WP2340: Thiamine (vitamin B1) biosynthesis and salvage
WP2341: vitamin B1 (thiamin) biosynthesis and salvage pathway
WP296: TCA Cycle - biocyc
WP626: Abscisic Acid Biosynthesis
WP677: Momilactone biosynthesis
WP1045: TGF-beta Receptor Signaling Pathway

Related Genes :
[al-2 B22I21.230 NCU00585] Bifunctional lycopene cyclase/phytoene synthase (Protein albino-2) [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Carotene cyclase) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]
[NSY B Solyc06g074240.1] Neoxanthin synthase, chloroplastic (EC 5.3.99.9) (Lycopene beta-cyclase) (EC 5.5.1.19)
[LCY1 LCYB LYC SZL1 At3g10230 F14P13.17] Lycopene beta cyclase, chloroplastic (EC 5.5.1.19) (AtLCY) (Protein SUPPRESSOR OF ZEAXANTHIN-LESS 1)
[LUT2 At5g57030 MHM17.16] Lycopene epsilon cyclase, chloroplastic (EC 5.5.1.18) (Protein LUTEIN DEFICIENT 2)
[AS ac22 ag22] Bifunctional abietadiene synthase, chloroplastic ((-)-abieta-7(8),13(14)-diene synthase) (Abietadiene cyclase) (AgAS) (Agggabi) [Includes: Abietadiene synthase (EC 4.2.3.18) (Neoabietadiene synthase) (EC 4.2.3.132); Copalyl diphosphate synthase (EC 5.5.1.12)]
[ZDS1 CLB5 PDE181 SPC1 ZDS At3g04870 T9J14.18] Zeta-carotene desaturase, chloroplastic/chromoplastic (EC 1.3.5.6) (9,9'-di-cis-zeta-carotene desaturase) (Carotene 7,8-desaturase) (Protein CHLOROPLAST BIOGENESIS 5) (Protein PIGMENT DEFECTIVE 181) (Protein SPONTANEOUS CELL DEATH 1)
[al-3 B8P8.010 NCU01427] Geranylgeranyl pyrophosphate synthase (GGPP synthase) (GGPPSase) (EC 2.5.1.-) ((2E,6E)-farnesyl diphosphate synthase) (Albino-3 protein) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Farnesyltranstransferase) (EC 2.5.1.29) (Geranylgeranyl diphosphate synthase) (Geranyltranstransferase) (EC 2.5.1.10)
[ADCY5] Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase)
[PSY1] Bifunctional 15-cis-phytoene synthase, chromoplastic (EC 2.5.1.32) (Geranylgeranyl pyrophosphate geranylgeranyltransferase) (Phytoene synthase)
[PDS1 PDS OsI_010044] 15-cis-phytoene desaturase, chloroplastic/chromoplastic (EC 1.3.5.5) (Phytoene dehydrogenase) (Phytoene desaturase)
[hchA A8C65_13880 A9R57_25255 AKG99_20940 AMK83_16550 B7C53_22525 B9M99_11580 B9T59_01945 BJJ90_15205 BMT49_12710 BMT53_00170 BUE81_10670 BW690_17225 BZL69_29425 C2U48_24800 C5715_19445 C5N07_21380 C6669_19295 C7B06_02290 C7B07_03930 CDL37_00765 CG691_19145 CG705_13560 CG706_14580 CIJ94_05515 COD46_23180 CQP61_17160 CRD98_26150 D3I61_11545 D5653_07335 D9D20_21030 D9D23_19420 D9D43_06110 D9D77_14400 D9H68_20750 D9H70_25730 D9H84_23295 DL800_09215 DLU27_07380 DNQ41_14245 DQE83_22775 DTL43_21780 DTM25_06080 DU290_13085 DU321_04440 E2855_02503 EAI36_14435 EC95NR1_00961 ED648_25045 ED653_23400 ED658_13700 ERS085379_01273 ERS085386_05041 HMPREF3040_01583 HW43_13705 NCTC10082_04431 NCTC10418_03071 NCTC10767_03558 NCTC11022_01867 NCTC11126_04427 NCTC11181_05650 NCTC12950_02263 NCTC13462_05714 NCTC8985_00529 NCTC9111_05933 NCTC9703_00277 PU06_24500 SAMEA3472055_03589 SAMEA3472056_01268 SAMEA3472070_00654 SAMEA3472080_04213 SAMEA3472090_03376 SAMEA3472110_00060 SAMEA3472112_00448 SAMEA3752372_00752 UN91_23615 WQ89_10695] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
[CAS1 CYC At2g07050 T4E14.16] Cycloartenol synthase (AtCYC) (EC 5.4.99.8) (2,3-epoxysqualene--cycloartenol cyclase)
[LAS] Bifunctional abietadiene synthase, chloroplastic (Abietadiene cyclase) (Diterpene synthase TPS1) (AbdiTPS1) (Levopimaradiene/abietadiene synthase) (AbLAS) [Includes: Abietadiene synthase (EC 4.2.3.18) (Levopimaradiene synthase) (EC 4.2.3.32) (Neoabietadiene synthase) (EC 4.2.3.132); Copalyl diphosphate synthase (EC 5.5.1.12)] (Fragment)
[ADCY5] Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5) (AC5)
[LSS OSC] Lanosterol synthase (EC 5.4.99.7) (2,3-epoxysqualene--lanosterol cyclase) (Oxidosqualene--lanosterol cyclase) (OSC) (hOSC)
[ERG7 YHR072W] Lanosterol synthase (EC 5.4.99.7) (2,3-epoxysqualene--lanosterol cyclase) (Oxidosqualene--lanosterol cyclase) (OSC)
[Adcy8] Adenylate cyclase type 8 (EC 4.6.1.1) (ATP pyrophosphate-lyase 8) (Adenylate cyclase type VIII) (Adenylyl cyclase 8) (Ca(2+)/calmodulin-activated adenylyl cyclase)
[Adcy5] Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5)
[Adcy5] Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5)
[TKFC DAK] Triokinase/FMN cyclase (Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing)) [Includes: ATP-dependent dihydroxyacetone kinase (DHA kinase) (EC 2.7.1.28) (EC 2.7.1.29) (Glycerone kinase) (Triokinase) (Triose kinase); FAD-AMP lyase (cyclizing) (EC 4.6.1.15) (FAD-AMP lyase (cyclic FMN forming)) (FMN cyclase)]
[ADCY5] Adenylate cyclase type 5 (EC 4.6.1.1) (ATP pyrophosphate-lyase 5) (Adenylate cyclase type V) (Adenylyl cyclase 5)
[GUCY1B1 GUC1B3 GUCSB3 GUCY1B3] Guanylate cyclase soluble subunit beta-1 (GCS-beta-1) (EC 4.6.1.2) (Guanylate cyclase soluble subunit beta-3) (GCS-beta-3) (Soluble guanylate cyclase small subunit)
[Gucy1b1 Guc1b3 Gucy1b3] Guanylate cyclase soluble subunit beta-1 (GCS-beta-1) (EC 4.6.1.2) (Guanylate cyclase soluble subunit beta-3) (GCS-beta-3) (Soluble guanylate cyclase small subunit)
[GUCY1B1 GUC1B3 GUCY1B3] Guanylate cyclase soluble subunit beta-1 (GCS-beta-1) (EC 4.6.1.2) (Guanylate cyclase soluble subunit beta-3) (GCS-beta-3) (Soluble guanylate cyclase small subunit)
[cya cyaA BP0760] Bifunctional hemolysin/adenylate cyclase (AC-HLY) (ACT) (Cyclolysin) [Cleaved into: Calmodulin-sensitive adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase); Hemolysin]
[LCY1 LYC] Lycopene beta cyclase, chloroplastic/chromoplastic (EC 5.5.1.19)
[LCY1 CRTL-1] Lycopene beta cyclase, chloroplastic (EC 5.5.1.19)
[TRI5 TOX 5] Trichodiene synthase (EC 4.2.3.6) (Core trichothecene cluster (CTC) protein 5) (Sesquiterpene cyclase TRI5) (TS)
[crtC] Acyclic carotenoid 1,2-hydratase (EC 4.2.1.131) (1-hydroxyneurosporene hydratase) (Hydroxylycopene hydratase) (Hydroxyneurosporene synthase) (Lycopene hydratase) (Neurosporene hydratase)
[cyc2 SCO6073 SC9B1.20] Germacradienol/geosmin synthase [Includes: Germacradienol/germacrene D synthase (EC 4.2.3.22) (EC 4.2.3.75) (Sesquiterpene cyclase) (Sesquiterpene synthase); Geosmin synthase (EC 4.1.99.16)]

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