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C-C motif chemokine

 B1AB88_HORSE            Unreviewed;        93 AA.
B1AB88;
08-APR-2008, integrated into UniProtKB/TrEMBL.
08-APR-2008, sequence version 1.
13-NOV-2019, entry version 88.
RecName: Full=C-C motif chemokine {ECO:0000256|RuleBase:RU361150};
Name=CCL3 {ECO:0000313|Ensembl:ENSECAP00000022173};
Equus caballus (Horse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
NCBI_TaxID=9796 {ECO:0000313|EMBL:ABZ91984.1};
[1] {ECO:0000313|EMBL:ABZ91984.1}
NUCLEOTIDE SEQUENCE.
Tompkins D., Hudgens T., Horohov D., Wagner B., Baldwin C.;
"U.S. Veterinary Immune Reagent Network: Expressed Equine Gene
Sequences.";
Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|Ensembl:ENSECAP00000022173, ECO:0000313|Proteomes:UP000002281}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000022173,
ECO:0000313|Proteomes:UP000002281};
PubMed=19892987; DOI=10.1126/science.1178158;
Broad Institute Genome Sequencing Platform;
Broad Institute Whole Genome Assembly Team;
Wade C.M., Giulotto E., Sigurdsson S., Zoli M., Gnerre S., Imsland F.,
Lear T.L., Adelson D.L., Bailey E., Bellone R.R., Bloecker H.,
Distl O., Edgar R.C., Garber M., Leeb T., Mauceli E., MacLeod J.N.,
Penedo M.C.T., Raison J.M., Sharpe T., Vogel J., Andersson L.,
Antczak D.F., Biagi T., Binns M.M., Chowdhary B.P., Coleman S.J.,
Della Valle G., Fryc S., Guerin G., Hasegawa T., Hill E.W., Jurka J.,
Kiialainen A., Lindgren G., Liu J., Magnani E., Mickelson J.R.,
Murray J., Nergadze S.G., Onofrio R., Pedroni S., Piras M.F.,
Raudsepp T., Rocchi M., Roeed K.H., Ryder O.A., Searle S., Skow L.,
Swinburne J.E., Syvaenen A.C., Tozaki T., Valberg S.J., Vaudin M.,
White J.R., Zody M.C., Lander E.S., Lindblad-Toh K.;
"Genome sequence, comparative analysis, and population genetics of the
domestic horse.";
Science 326:865-867(2009).
[3] {ECO:0000313|Ensembl:ENSECAP00000022173}
IDENTIFICATION.
STRAIN=Thoroughbred {ECO:0000313|Ensembl:ENSECAP00000022173};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
-!- SUBCELLULAR LOCATION: Secreted {ECO:0000256|RuleBase:RU361150}.
-!- SIMILARITY: Belongs to the intercrine beta (chemokine CC) family.
{ECO:0000256|RuleBase:RU361150, ECO:0000256|SAAS:SAAS00582068}.
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EMBL; EU438775; ABZ91984.1; -; mRNA.
RefSeq; NP_001108413.1; NM_001114941.1.
Ensembl; ENSECAT00000026565; ENSECAP00000022173; ENSECAG00000024640.
GeneID; 100057909; -.
KEGG; ecb:100057909; -.
CTD; 6348; -.
eggNOG; ENOG410J4I9; Eukaryota.
eggNOG; ENOG410YXJU; LUCA.
GeneTree; ENSGT00970000193363; -.
HOGENOM; HOG000036685; -.
KO; K05408; -.
OMA; MALCNQV; -.
OrthoDB; 1575018at2759; -.
TreeFam; TF334888; -.
Proteomes; UP000002281; Chromosome 11.
Bgee; ENSECAG00000024640; Expressed in 3 organ(s), highest expression level in liver.
GO; GO:0005623; C:cell; IEA:GOC.
GO; GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO; GO:0005829; C:cytosol; ISS:UniProtKB.
GO; GO:0005615; C:extracellular space; ISS:UniProtKB.
GO; GO:0004698; F:calcium-dependent protein kinase C activity; ISS:UniProtKB.
GO; GO:0048020; F:CCR chemokine receptor binding; IBA:GO_Central.
GO; GO:0042056; F:chemoattractant activity; ISS:UniProtKB.
GO; GO:0008009; F:chemokine activity; ISS:UniProtKB.
GO; GO:0016301; F:kinase activity; ISS:UniProtKB.
GO; GO:0016004; F:phospholipase activator activity; ISS:UniProtKB.
GO; GO:0004672; F:protein kinase activity; ISS:UniProtKB.
GO; GO:0043615; P:astrocyte cell migration; ISS:UniProtKB.
GO; GO:0006816; P:calcium ion transport; ISS:UniProtKB.
GO; GO:0019722; P:calcium-mediated signaling; ISS:UniProtKB.
GO; GO:0001775; P:cell activation; ISS:UniProtKB.
GO; GO:0007267; P:cell-cell signaling; ISS:UniProtKB.
GO; GO:0006874; P:cellular calcium ion homeostasis; ISS:UniProtKB.
GO; GO:0071346; P:cellular response to interferon-gamma; IBA:GO_Central.
GO; GO:0071347; P:cellular response to interleukin-1; IBA:GO_Central.
GO; GO:0071407; P:cellular response to organic cyclic compound; ISS:UniProtKB.
GO; GO:0071356; P:cellular response to tumor necrosis factor; IBA:GO_Central.
GO; GO:0070098; P:chemokine-mediated signaling pathway; IBA:GO_Central.
GO; GO:0006935; P:chemotaxis; ISS:UniProtKB.
GO; GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.
GO; GO:0048245; P:eosinophil chemotaxis; ISS:UniProtKB.
GO; GO:0043308; P:eosinophil degranulation; ISS:UniProtKB.
GO; GO:0006887; P:exocytosis; ISS:UniProtKB.
GO; GO:0007186; P:G protein-coupled receptor signaling pathway; IBA:GO_Central.
GO; GO:0071621; P:granulocyte chemotaxis; ISS:UniProtKB.
GO; GO:0006954; P:inflammatory response; ISS:UniProtKB.
GO; GO:0031663; P:lipopolysaccharide-mediated signaling pathway; ISS:UniProtKB.
GO; GO:0048247; P:lymphocyte chemotaxis; ISS:UniProtKB.
GO; GO:0048246; P:macrophage chemotaxis; ISS:UniProtKB.
GO; GO:0000165; P:MAPK cascade; ISS:UniProtKB.
GO; GO:0002548; P:monocyte chemotaxis; ISS:UniProtKB.
GO; GO:0043922; P:negative regulation by host of viral transcription; ISS:UniProtKB.
GO; GO:0010629; P:negative regulation of gene expression; ISS:UniProtKB.
GO; GO:0045671; P:negative regulation of osteoclast differentiation; ISS:UniProtKB.
GO; GO:0030593; P:neutrophil chemotaxis; ISS:UniProtKB.
GO; GO:0001649; P:osteoblast differentiation; ISS:UniProtKB.
GO; GO:0051928; P:positive regulation of calcium ion transport; ISS:UniProtKB.
GO; GO:0050850; P:positive regulation of calcium-mediated signaling; ISS:UniProtKB.
GO; GO:0030335; P:positive regulation of cell migration; ISS:UniProtKB.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; ISS:UniProtKB.
GO; GO:0010628; P:positive regulation of gene expression; ISS:UniProtKB.
GO; GO:0043547; P:positive regulation of GTPase activity; IBA:GO_Central.
GO; GO:0050729; P:positive regulation of inflammatory response; ISS:UniProtKB.
GO; GO:0050718; P:positive regulation of interleukin-1 beta secretion; ISS:UniProtKB.
GO; GO:2000503; P:positive regulation of natural killer cell chemotaxis; ISS:UniProtKB.
GO; GO:0043525; P:positive regulation of neuron apoptotic process; ISS:UniProtKB.
GO; GO:0032760; P:positive regulation of tumor necrosis factor production; ISS:UniProtKB.
GO; GO:0043491; P:protein kinase B signaling; ISS:UniProtKB.
GO; GO:0006468; P:protein phosphorylation; ISS:UniProtKB.
GO; GO:0050795; P:regulation of behavior; ISS:UniProtKB.
GO; GO:0008360; P:regulation of cell shape; ISS:UniProtKB.
GO; GO:0051930; P:regulation of sensory perception of pain; ISS:UniProtKB.
GO; GO:0014808; P:release of sequestered calcium ion into cytosol by sarcoplasmic reticulum; ISS:UniProtKB.
GO; GO:0070723; P:response to cholesterol; ISS:UniProtKB.
GO; GO:0009636; P:response to toxic substance; ISS:UniProtKB.
GO; GO:0023052; P:signaling; ISS:UniProtKB.
GO; GO:0010818; P:T cell chemotaxis; ISS:UniProtKB.
InterPro; IPR039809; Chemokine_b/g/d.
InterPro; IPR000827; Chemokine_CC_CS.
InterPro; IPR001811; Chemokine_IL8-like_dom.
InterPro; IPR036048; Interleukin_8-like_sf.
PANTHER; PTHR12015; PTHR12015; 1.
Pfam; PF00048; IL8; 1.
SMART; SM00199; SCY; 1.
SUPFAM; SSF54117; SSF54117; 1.
PROSITE; PS00472; SMALL_CYTOKINES_CC; 1.
2: Evidence at transcript level;
Chemotaxis {ECO:0000256|RuleBase:RU361150};
Complete proteome {ECO:0000313|Proteomes:UP000002281};
Cytokine {ECO:0000256|RuleBase:RU361150,
ECO:0000256|SAAS:SAAS00582046};
Reference proteome {ECO:0000313|Proteomes:UP000002281};
Secreted {ECO:0000256|RuleBase:RU361150};
Signal {ECO:0000256|RuleBase:RU361150}.
SIGNAL 1 23 {ECO:0000256|RuleBase:RU361150}.
CHAIN 24 93 C-C motif chemokine.
{ECO:0000256|RuleBase:RU361150}.
/FTId=PRO_5013982005.
DOMAIN 31 89 SCY. {ECO:0000259|SMART:SM00199}.
SEQUENCE 93 AA; 10323 MW; 59A79FC7F3383F4C CRC64;
MKVPVAALAV LLCTMALCSQ VFSVPFGADT PTACCFSYVS RQIPRKFIND YYETSSQCSK
PAIIFQTKRS RQVCADPSEA WVQEYVTDLE LSA


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Pathways :
WP2292: Chemokine signaling pathway
WP1963: The effect of Glucocorticoids on target gene expression

Related Genes :
[Ccl25 Scya25 Teck] C-C motif chemokine 25 (Chemokine TECK) (Small-inducible cytokine A25) (Thymus-expressed chemokine)
[Ccl21a Scya21 Scya21a] C-C motif chemokine 21a (6Ckine) (Beta-chemokine exodus-2) (Small-inducible cytokine A21a) (Thymus-derived chemotactic agent 4) (TCA4)
[Cxcl16 Srpsox] C-X-C motif chemokine 16 (Scavenger receptor for phosphatidylserine and oxidized low density lipoprotein) (SR-PSOX) (Small-inducible cytokine B16) (Transmembrane chemokine CXCL16)
[Ccl27 Ilc Scya27] C-C motif chemokine 27 (CC chemokine ILC) (Cutaneous T-cell-attracting chemokine) (CTACK) (ESkine) (IL-11 R-alpha-locus chemokine) (ALP) (mILC) (Skinkine) (Small-inducible cytokine A27)
[Ccl19 Elc Scya19] C-C motif chemokine 19 (Epstein-Barr virus-induced molecule 1 ligand chemokine) (EBI1 ligand chemokine) (ELC) (Small-inducible cytokine A19)
[Cxcl12 Sdf1] Stromal cell-derived factor 1 (SDF-1) (12-O-tetradecanoylphorbol 13-acetate repressed protein 1) (TPAR1) (C-X-C motif chemokine 12) (Pre-B cell growth-stimulating factor) (PBSF) (Thymic lymphoma cell-stimulating factor) (TLSF)
[Cxcl10 Crg2 Ifi10 Inp10 Scyb10] C-X-C motif chemokine 10 (10 kDa interferon gamma-induced protein) (Gamma-IP10) (IP-10) (C7) (Interferon-gamma induced protein CRG-2) (Small-inducible cytokine B10)
[Cxcl13 Blc Scyb13] C-X-C motif chemokine 13 (B lymphocyte chemoattractant) (CXC chemokine BLC) (Small-inducible cytokine B13)
[Ccl21b Scya21 Scya21b] C-C motif chemokine 21b (6Ckine) (Beta-chemokine exodus-2) (Small-inducible cytokine A21b) (Thymus-derived chemotactic agent 4) (TCA4)
[Cxcl9 Mig Scyb9] C-X-C motif chemokine 9 (Gamma-interferon-induced monokine) (Monokine induced by interferon-gamma) (MIG) (MuMIG) (Protein m119) (Small-inducible cytokine B9)
[Ccl8 Mcp2 Scya8] C-C motif chemokine 8 (Monocyte chemoattractant protein 2) (Monocyte chemotactic protein 2) (MCP-2) (Small-inducible cytokine A8)
[Ccl5 Scya5] C-C motif chemokine 5 (MuRantes) (SIS-delta) (Small-inducible cytokine A5) (T-cell-specific protein RANTES)
[Cx3cl1 Cx3c Fkn Scyd1] Fractalkine (C-X3-C motif chemokine 1) (CX3C membrane-anchored chemokine) (Neurotactin) (Small-inducible cytokine D1) [Cleaved into: Processed fractalkine]
[Cxcl5 Scyb5] C-X-C motif chemokine 5 (Cytokine LIX) (Small-inducible cytokine B5) [Cleaved into: GCP-2(1-78); GCP-2(9-78)]
[Ccl1 Scya1 Tca3] C-C motif chemokine 1 (P500) (SIS-epsilon) (Small-inducible cytokine A1) (T-cell activation protein 3) (TCA-3) (TCA3)
[Ccl24 Scya24] C-C motif chemokine 24 (Eosinophil chemotactic protein 2) (Eotaxin-2) (Small-inducible cytokine A24)
[Ccl7 Fic Mcp3 Scya7] C-C motif chemokine 7 (Intercrine/chemokine MARC) (Monocyte chemoattractant protein 3) (Monocyte chemotactic protein 3) (MCP-3) (Protein FIC) (Small-inducible cytokine A7)
[Cxcl14 Bmac Kec Ks1 Mip2g Scyb14] C-X-C motif chemokine 14 (B-cell and monocyte-activating chemokine) (Chemokine BRAK) (Kidney-expressed chemokine CXC) (MIP-2G) (Small-inducible cytokine B14)
[Cxcl15 Scyb15] C-X-C motif chemokine 15 (Lungkine) (Small-inducible cytokine B15)
[Ccl11 Scya11] Eotaxin (C-C motif chemokine 11) (Eosinophil chemotactic protein) (Small-inducible cytokine A11)
[Ccl2 mCG_8184] C-C motif chemokine
[Xcl1 Lptn Ltn Scyc1] Lymphotactin (C motif chemokine 1) (Cytokine SCM-1) (Lymphotaxin) (Small-inducible cytokine C1)
[Pf4 Cxcl4 Scyb4] Platelet factor 4 (PF-4) (C-X-C motif chemokine 4)
[CX3CL1 CK820_G0016596] C-X3-C motif chemokine ligand 1 (CX3CL1 isoform 1) (Chemokine (C-X3-C motif) ligand 1)
[CCL13 MCP4 NCC1 SCYA13] C-C motif chemokine 13 (CK-beta-10) (Monocyte chemoattractant protein 4) (Monocyte chemotactic protein 4) (MCP-4) (NCC-1) (Small-inducible cytokine A13) [Cleaved into: C-C motif chemokine 13, long chain; C-C motif chemokine 13, medium chain; C-C motif chemokine 13, short chain]
[Ccl21c Scya21c] C-C motif chemokine 21c (6Ckine) (Beta-chemokine exodus-2) (Small-inducible cytokine A21c) (Thymus-derived chemotactic agent 4) (TCA4)
[Ccrl2 Ccr11 Lccr] C-C chemokine receptor-like 2 (Chemokine receptor CCR11) (G-protein coupled beta chemokine receptor) (Lipopolysaccharide-inducible C-C chemokine receptor) (L-CCR)
[Ccl9 Mrp2 Scya10 Scya9] C-C motif chemokine 9 (CCF18) (Macrophage inflammatory protein 1-gamma) (MIP-1-gamma) (Macrophage inflammatory protein-related protein 2) (MRP-2) (Small-inducible cytokine A9) [Cleaved into: CCL9(29-101); CCL9(30-101); CCL9(31-101)]
[CCR2 CK820_G0005234] C-C motif chemokine receptor 2 (CCR2 isoform 1) (CCR2 isoform 2)
[Ccl5 mCG_11684] C-C motif chemokine

Bibliography :