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C-C motif chemokine 20 (Beta-chemokine exodus-1) (CC chemokine LARC) (CC chemokine ST38) (Liver and activation-regulated chemokine) (Macrophage inflammatory protein 3 alpha) (MIP-3-alpha) (Small-inducible cytokine A20)

 CCL20_RAT               Reviewed;          96 AA.
P97884;
15-JUL-1999, integrated into UniProtKB/Swiss-Prot.
01-MAY-1997, sequence version 1.
16-JAN-2019, entry version 125.
RecName: Full=C-C motif chemokine 20;
AltName: Full=Beta-chemokine exodus-1;
AltName: Full=CC chemokine LARC;
AltName: Full=CC chemokine ST38;
AltName: Full=Liver and activation-regulated chemokine;
AltName: Full=Macrophage inflammatory protein 3 alpha;
Short=MIP-3-alpha;
AltName: Full=Small-inducible cytokine A20;
Flags: Precursor;
Name=Ccl20; Synonyms=Scya20, St38;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley;
Kelner G.S., Maciejewski-Lenoir D., Lee E.D., Maki R.A.;
"Activated rat astrocytes produce the CC chemokine Exodus.";
Submitted (FEB-1997) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND PROTEIN SEQUENCE OF N-TERMINUS.
STRAIN=Fischer 344; TISSUE=Brain;
PubMed=9916893; DOI=10.1016/S0165-5728(98)00204-5;
Utans-Schneitz U., Lorez H., Klinkert W.E.F., da Silva J.,
Lesslauer W.;
"A novel rat CC chemokine, identified by targeted differential
display, is upregulated in brain inflammation.";
J. Neuroimmunol. 92:179-190(1998).
-!- FUNCTION: Acts as a ligand for C-C chemokine receptor CCR6.
Signals through binding and activation of CCR6 and induces a
strong chemotactic response and mobilization of intracellular
calcium ions. The ligand-receptor pair CCL20-CCR6 is responsible
for the chemotaxis of dendritic cells (DC), effector/memory T-
cells and B-cells and plays an important role at skin and mucosal
surfaces under homeostatic and inflammatory conditions, as well as
in pathology, including cancer and autoimmune diseases. CCL20 acts
as a chemotactic factor that attracts lymphocytes and, slightly,
neutrophils, but not monocytes. Involved in the recruitment of
both the proinflammatory IL17 producing helper T-cells (Th17) and
the regulatory T-cells (Treg) to sites of inflammation. Required
for optimal migration of thymic natural regulatory T cells
(nTregs) and DN1 early thymocyte progenitor cells. Positively
regulates sperm motility and chemotaxis via its binding to CCR6
which triggers Ca2+ mobilization in the sperm which is important
for its motility. May be involved in formation and function of the
mucosal lymphoid tissues by attracting lymphocytes and dendritic
cells towards epithelial cells. {ECO:0000250|UniProtKB:O89093,
ECO:0000250|UniProtKB:P78556}.
-!- SUBCELLULAR LOCATION: Secreted {ECO:0000250|UniProtKB:P78556}.
-!- TISSUE SPECIFICITY: Low levels in thymus and lung.
-!- INDUCTION: By TNF in experimental allergic panencaphalomyelitis
(EAP) and by TNF and IL-1 in primary astrocytes.
-!- SIMILARITY: Belongs to the intercrine beta (chemokine CC) family.
{ECO:0000305}.
-----------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution (CC BY 4.0) License
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EMBL; U90447; AAB61459.1; -; mRNA.
EMBL; AF053312; AAC78294.1; -; mRNA.
RefSeq; NP_062106.1; NM_019233.1.
UniGene; Rn.10722; -.
ProteinModelPortal; P97884; -.
SMR; P97884; -.
STRING; 10116.ENSRNOP00000021730; -.
PaxDb; P97884; -.
PRIDE; P97884; -.
Ensembl; ENSRNOT00000021730; ENSRNOP00000021730; ENSRNOG00000015992.
GeneID; 29538; -.
KEGG; rno:29538; -.
UCSC; RGD:3646; rat.
CTD; 6364; -.
RGD; 3646; Ccl20.
eggNOG; ENOG410J2BK; Eukaryota.
eggNOG; ENOG410ZGME; LUCA.
GeneTree; ENSGT00940000165529; -.
HOGENOM; HOG000036685; -.
HOVERGEN; HBG017871; -.
InParanoid; P97884; -.
KO; K14625; -.
OMA; CCLRYTE; -.
OrthoDB; 1528181at2759; -.
PhylomeDB; P97884; -.
TreeFam; TF334888; -.
Reactome; R-RNO-380108; Chemokine receptors bind chemokines.
Reactome; R-RNO-418594; G alpha (i) signalling events.
PRO; PR:P97884; -.
Proteomes; UP000002494; Chromosome 9.
Bgee; ENSRNOG00000015992; Expressed in 6 organ(s), highest expression level in colon.
Genevisible; P97884; RN.
GO; GO:0005615; C:extracellular space; IDA:RGD.
GO; GO:0048020; F:CCR chemokine receptor binding; IBA:GO_Central.
GO; GO:0031731; F:CCR6 chemokine receptor binding; ISS:UniProtKB.
GO; GO:0008009; F:chemokine activity; IDA:RGD.
GO; GO:0035584; P:calcium-mediated signaling using intracellular calcium source; ISS:UniProtKB.
GO; GO:0071346; P:cellular response to interferon-gamma; IBA:GO_Central.
GO; GO:0071347; P:cellular response to interleukin-1; IBA:GO_Central.
GO; GO:0071222; P:cellular response to lipopolysaccharide; IEP:RGD.
GO; GO:0071223; P:cellular response to lipoteichoic acid; IEP:RGD.
GO; GO:0071310; P:cellular response to organic substance; IEP:RGD.
GO; GO:0071356; P:cellular response to tumor necrosis factor; IBA:GO_Central.
GO; GO:0070098; P:chemokine-mediated signaling pathway; IBA:GO_Central.
GO; GO:0006935; P:chemotaxis; IDA:RGD.
GO; GO:0007186; P:G protein-coupled receptor signaling pathway; IBA:GO_Central.
GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
GO; GO:0048247; P:lymphocyte chemotaxis; IBA:GO_Central.
GO; GO:0002548; P:monocyte chemotaxis; IBA:GO_Central.
GO; GO:0030593; P:neutrophil chemotaxis; IBA:GO_Central.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IBA:GO_Central.
GO; GO:0043547; P:positive regulation of GTPase activity; IBA:GO_Central.
GO; GO:0050726; P:positive regulation of interleukin-1 alpha biosynthetic process; IDA:RGD.
GO; GO:0051770; P:positive regulation of nitric-oxide synthase biosynthetic process; IDA:RGD.
GO; GO:0072678; P:T cell migration; ISS:UniProtKB.
GO; GO:0072679; P:thymocyte migration; ISS:UniProtKB.
GO; GO:0042060; P:wound healing; IEP:RGD.
CDD; cd01119; Chemokine_CC_DCCL; 1.
InterPro; IPR039809; Chemokine_b/g/d.
InterPro; IPR034133; Chemokine_CC_DCCL.
InterPro; IPR001811; Chemokine_IL8-like_dom.
InterPro; IPR036048; Interleukin_8-like_sf.
PANTHER; PTHR12015; PTHR12015; 1.
Pfam; PF00048; IL8; 1.
SMART; SM00199; SCY; 1.
SUPFAM; SSF54117; SSF54117; 1.
1: Evidence at protein level;
Chemotaxis; Complete proteome; Cytokine; Direct protein sequencing;
Disulfide bond; Inflammatory response; Reference proteome; Secreted;
Signal.
SIGNAL 1 26 {ECO:0000269|PubMed:9916893}.
CHAIN 27 96 C-C motif chemokine 20.
/FTId=PRO_0000005219.
DISULFID 31 58 {ECO:0000250}.
DISULFID 32 74 {ECO:0000250}.
SEQUENCE 96 AA; 10875 MW; 7B323410F2B2E6DF CRC64;
MACKHLPFLA LAGVLLAYLC SQSEAASNFD CCLTYTKNVY HHARNFVGFT TQMADEACDI
NAIIFHLKSK RSVCADPKQI WVKRILHLLS LRTKKM


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Pathways :
WP2292: Chemokine signaling pathway
WP1566: Citrate cycle (TCA cycle)
WP210: Cytoplasmic Ribosomal Proteins
WP1224: EBV LMP1 signaling
WP1225: estrogen signalling
WP1434: Osteopontin Signaling
WP1531: Vitamin D synthesis
WP1571: EBV LMP1 signaling
WP1614: 1- and 2-Methylnaphthalene degradation
WP1655: Geraniol degradation
WP1835: Interferon alpha/beta signaling
WP1904: RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
WP1963: The effect of Glucocorticoids on target gene expression
WP215: noncanonical wnt pathway
WP219: Cytoplasmic tRNA Synthetases
WP2199: Seed Development
WP244: Alpha 6 Beta 4 signaling pathway
WP262: EBV LMP1 signaling
WP32: Translation Factors
WP433: tRNA Synthetases
WP537: Translation Factors
WP566: canonical wnt - zebrafish
WP1003: Ovarian Infertility Genes
WP1047: TNF-alpha NF-kB Signaling Pathway
WP1120: Ovarian Infertility Genes

Related Genes :
[CCL20 LARC MIP3A SCYA20] C-C motif chemokine 20 (Beta-chemokine exodus-1) (CC chemokine LARC) (Liver and activation-regulated chemokine) (Macrophage inflammatory protein 3 alpha) (MIP-3-alpha) (Small-inducible cytokine A20) [Cleaved into: CCL20(1-67); CCL20(1-64); CCL20(2-70)]
[CCL18 AMAC1 DCCK1 MIP4 PARC SCYA18] C-C motif chemokine 18 (Alternative macrophage activation-associated CC chemokine 1) (AMAC-1) (CC chemokine PARC) (Dendritic cell chemokine 1) (DC-CK1) (Macrophage inflammatory protein 4) (MIP-4) (Pulmonary and activation-regulated chemokine) (Small-inducible cytokine A18) [Cleaved into: CCL18(1-68); CCL18(3-69); CCL18(4-69)]
[CCL3 G0S19-1 MIP1A SCYA3] C-C motif chemokine 3 (G0/G1 switch regulatory protein 19-1) (Macrophage inflammatory protein 1-alpha) (MIP-1-alpha) (PAT 464.1) (SIS-beta) (Small-inducible cytokine A3) (Tonsillar lymphocyte LD78 alpha protein) [Cleaved into: MIP-1-alpha(4-69) (LD78-alpha(4-69))]
[CCL4 LAG1 MIP1B SCYA4] C-C motif chemokine 4 (G-26 T-lymphocyte-secreted protein) (HC21) (Lymphocyte activation gene 1 protein) (LAG-1) (MIP-1-beta(1-69)) (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (PAT 744) (Protein H400) (SIS-gamma) (Small-inducible cytokine A4) (T-cell activation protein 2) (ACT-2) [Cleaved into: MIP-1-beta(3-69)]
[CCL15 MIP5 NCC3 SCYA15] C-C motif chemokine 15 (Chemokine CC-2) (HCC-2) (Leukotactin-1) (LKN-1) (MIP-1 delta) (Macrophage inflammatory protein 5) (MIP-5) (Mrp-2b) (NCC-3) (Small-inducible cytokine A15) [Cleaved into: CCL15(22-92); CCL15(25-92); CCL15(29-92)]
[CCL17 SCYA17 TARC] C-C motif chemokine 17 (CC chemokine TARC) (Small-inducible cytokine A17) (Thymus and activation-regulated chemokine)
[CCL4L1 CCL4L LAG1 SCYA4L1; CCL4L2 CCL4L SCYA4L2] C-C motif chemokine 4-like (Lymphocyte activation gene 1 protein) (LAG-1) (Macrophage inflammatory protein 1-beta) (MIP-1-beta) (Monocyte adherence-induced protein 5-alpha) (Small-inducible cytokine A4-like)
[CCL21 SCYA21 UNQ784/PRO1600] C-C motif chemokine 21 (6Ckine) (Beta-chemokine exodus-2) (Secondary lymphoid-tissue chemokine) (SLC) (Small-inducible cytokine A21)
[Ccl21a Scya21 Scya21a] C-C motif chemokine 21a (6Ckine) (Beta-chemokine exodus-2) (Small-inducible cytokine A21a) (Thymus-derived chemotactic agent 4) (TCA4)
[Ccl27 Ilc Scya27] C-C motif chemokine 27 (CC chemokine ILC) (Cutaneous T-cell-attracting chemokine) (CTACK) (ESkine) (IL-11 R-alpha-locus chemokine) (ALP) (mILC) (Skinkine) (Small-inducible cytokine A27)
[Ccl21b Scya21 Scya21b] C-C motif chemokine 21b (6Ckine) (Beta-chemokine exodus-2) (Small-inducible cytokine A21b) (Thymus-derived chemotactic agent 4) (TCA4)
[CCR1 CMKBR1 CMKR1 SCYAR1] C-C chemokine receptor type 1 (C-C CKR-1) (CC-CKR-1) (CCR-1) (CCR1) (HM145) (LD78 receptor) (Macrophage inflammatory protein 1-alpha receptor) (MIP-1alpha-R) (RANTES-R) (CD antigen CD191)
[Cxcl2 Cinc3 Mip-2 Mip2 Scyb2] C-X-C motif chemokine 2 (Cytokine-induced neutrophil chemoattractant 3) (CINC-3) (Macrophage inflammatory protein 2) (MIP2)
[CXCL2 GRO2 GROB MIP2A SCYB2] C-X-C motif chemokine 2 (Growth-regulated protein beta) (Gro-beta) (Macrophage inflammatory protein 2-alpha) (MIP2-alpha) [Cleaved into: GRO-beta(5-73) (GRO-beta-T) (Hematopoietic synergistic factor) (HSF) (SB-251353)]
[Ccl19 Elc Scya19] C-C motif chemokine 19 (Epstein-Barr virus-induced molecule 1 ligand chemokine) (EBI1 ligand chemokine) (ELC) (Small-inducible cytokine A19)
[CCL3L1 D17S1718 G0S19-2 SCYA3L1; CCL3L3] C-C motif chemokine 3-like 1 (G0/G1 switch regulatory protein 19-2) (LD78-beta(1-70)) (PAT 464.2) (Small-inducible cytokine A3-like 1) (Tonsillar lymphocyte LD78 beta protein) [Cleaved into: LD78-beta(3-70); LD78-beta(5-70)]
[Cx3cl1 Cx3c Fkn Scyd1] Fractalkine (C-X3-C motif chemokine 1) (CX3C membrane-anchored chemokine) (Neurotactin) (Small-inducible cytokine D1) [Cleaved into: Processed fractalkine]
[Ccr1 Cmkbr1] C-C chemokine receptor type 1 (C-C CKR-1) (CC-CKR-1) (CCR-1) (CCR1) (Macrophage inflammatory protein 1-alpha receptor) (MIP-1alpha-R) (RANTES-R) (CD antigen CD191)
[Ccl1 Scya1 Tca3] C-C motif chemokine 1 (P500) (SIS-epsilon) (Small-inducible cytokine A1) (T-cell activation protein 3) (TCA-3) (TCA3)
[Ccl25 Scya25 Teck] C-C motif chemokine 25 (Chemokine TECK) (Small-inducible cytokine A25) (Thymus-expressed chemokine)
[CX3CL1 FKN NTT SCYD1 A-152E5.2] Fractalkine (C-X3-C motif chemokine 1) (CX3C membrane-anchored chemokine) (Neurotactin) (Small-inducible cytokine D1) [Cleaved into: Processed fractalkine]
[CCR6 CKRL3 CMKBR6 GPR29 STRL22] C-C chemokine receptor type 6 (C-C CKR-6) (CC-CKR-6) (CCR-6) (Chemokine receptor-like 3) (CKR-L3) (DRY6) (G-protein coupled receptor 29) (GPR-CY4) (GPRCY4) (LARC receptor) (CD antigen CD196)
[Ccl2 Je Mcp1 Scya2] C-C motif chemokine 2 (Monocyte chemoattractant protein 1) (Monocyte chemotactic protein 1) (MCP-1) (Platelet-derived growth factor-inducible protein JE) (Small-inducible cytokine A2)
[XCL1 LTN SCYC1] Lymphotactin (ATAC) (C motif chemokine 1) (Cytokine SCM-1) (Lymphotaxin) (SCM-1-alpha) (Small-inducible cytokine C1) (XC chemokine ligand 1)
[Ccr5 Cmkbr5] C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5) (CCR-5) (MIP-1 alpha receptor) (CD antigen CD195)
[CCL25 SCYA25 TECK] C-C motif chemokine 25 (Chemokine TECK) (Small-inducible cytokine A25) (Thymus-expressed chemokine)
[CXCL14 MIP2G NJAC SCYB14 PSEC0212 UNQ240/PRO273] C-X-C motif chemokine 14 (Chemokine BRAK) (MIP-2G) (Small-inducible cytokine B14)
[Cxcl10 Crg2 Ifi10 Inp10 Scyb10] C-X-C motif chemokine 10 (10 kDa interferon gamma-induced protein) (Gamma-IP10) (IP-10) (C7) (Interferon-gamma induced protein CRG-2) (Small-inducible cytokine B10)
[CCL2 MCP1 SCYA2] C-C motif chemokine 2 (HC11) (Monocyte chemoattractant protein 1) (Monocyte chemotactic and activating factor) (MCAF) (Monocyte chemotactic protein 1) (MCP-1) (Monocyte secretory protein JE) (Small-inducible cytokine A2)
[ACKR2 CCBP2 CCR10 CMKBR9 D6] Atypical chemokine receptor 2 (C-C chemokine receptor D6) (Chemokine receptor CCR-10) (Chemokine receptor CCR-9) (Chemokine-binding protein 2) (Chemokine-binding protein D6)

Bibliography :
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