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CD48 antigen (BCM1 surface antigen) (BLAST-1) (HM48-1) (MRC OX-45 surface antigen) (SLAM family member 2) (SLAMF2) (Signaling lymphocytic activation molecule 2) (sgp-60) (CD antigen CD48)

 CD48_MOUSE              Reviewed;         240 AA.
P18181; Q545K2;
01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
01-NOV-1990, sequence version 1.
12-AUG-2020, entry version 177.
RecName: Full=CD48 antigen;
AltName: Full=BCM1 surface antigen;
AltName: Full=BLAST-1;
AltName: Full=HM48-1;
AltName: Full=MRC OX-45 surface antigen;
AltName: Full=SLAM family member 2;
Short=SLAMF2;
AltName: Full=Signaling lymphocytic activation molecule 2;
AltName: Full=sgp-60;
AltName: CD_antigen=CD48;
Flags: Precursor;
Name=Cd48; Synonyms=Bcm-1;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA], GPI-ANCHOR AT SER-217, AND SUBCELLULAR
LOCATION.
STRAIN=BALB/cJ;
PubMed=1693656; DOI=10.1084/jem.171.6.2115;
Wong Y.W., Williams A.F., Kingsmore S.F., Seldin M.F.;
"Structure, expression, and genetic linkage of the mouse BCM1 (OX45 or
Blast-1) antigen. Evidence for genetic duplication giving rise to the BCM1
region on mouse chromosome 1 and the CD2/LFA3 region on mouse chromosome
3.";
J. Exp. Med. 171:2115-2130(1990).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J; TISSUE=Bone marrow, Lung, and Pancreas;
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[3]
PROTEIN SEQUENCE OF 74-80.
PubMed=8475091; DOI=10.1073/pnas.90.8.3418;
Cabrero J.G., Freeman G.J., Lane W.S., Reiser H.;
"Identification, by protein sequencing and gene transfection, of sgp-60 as
the murine homologue of CD48.";
Proc. Natl. Acad. Sci. U.S.A. 90:3418-3422(1993).
[4]
PROTEIN SEQUENCE OF 23-40, INTERACTION WITH CD2, AND SUBCELLULAR LOCATION.
PubMed=1383383; DOI=10.1084/jem.176.5.1241;
Kato K., Koyanagi M., Okada H., Takanahi T., Wong Y.W., Williams A.F.,
Okumura K., Yagita H.;
"CD48 is a counter-receptor for mouse CD2 and is involved in T cell
activation.";
J. Exp. Med. 176:1241-1249(1992).
[5]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Spleen;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and expression.";
Cell 143:1174-1189(2010).
[6]
X-RAY CRYSTALLOGRAPHY (1.63 ANGSTROMS) OF 27-128 ALONE AND IN COMPLEX WITH
CD244.
PubMed=17950006; DOI=10.1016/j.immuni.2007.08.019;
Velikovsky C.A., Deng L., Chlewicki L.K., Fernandez M.M., Kumar V.,
Mariuzza R.A.;
"Structure of natural killer receptor 2B4 bound to CD48 reveals basis for
heterophilic recognition in signaling lymphocyte activation molecule
family.";
Immunity 27:572-584(2007).
-!- FUNCTION: Ligand for CD2. Might facilitate interaction between
activated lymphocytes. Probably involved in regulating T-cell
activation.
-!- SUBUNIT: Interacts with CD2 (PubMed:1383383). Interacts with CD244 in a
heterophilic manner (PubMed:17950006). {ECO:0000269|PubMed:1383383,
ECO:0000269|PubMed:17950006}.
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:1383383};
Lipid-anchor, GPI-anchor {ECO:0000269|PubMed:1693656}.
---------------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
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EMBL; X53526; CAA37604.1; -; mRNA.
EMBL; X17501; CAA35542.1; -; mRNA.
EMBL; AK007741; BAB25228.1; -; mRNA.
EMBL; AK084984; BAC39328.1; -; mRNA.
EMBL; AK151601; BAE30541.1; -; mRNA.
CCDS; CCDS15501.1; -.
PIR; JL0143; JL0143.
RefSeq; NP_031675.1; NM_007649.4.
PDB; 2PTT; X-ray; 1.63 A; A=27-128.
PDB; 2PTV; X-ray; 1.66 A; A=27-128.
PDBsum; 2PTT; -.
PDBsum; 2PTV; -.
SMR; P18181; -.
STRING; 10090.ENSMUSP00000064241; -.
GlyGen; P18181; 6 sites.
PhosphoSitePlus; P18181; -.
SwissPalm; P18181; -.
CPTAC; non-CPTAC-4020; -.
EPD; P18181; -.
MaxQB; P18181; -.
PaxDb; P18181; -.
PeptideAtlas; P18181; -.
PRIDE; P18181; -.
Antibodypedia; 3737; 1044 antibodies.
Ensembl; ENSMUST00000068584; ENSMUSP00000064241; ENSMUSG00000015355.
GeneID; 12506; -.
KEGG; mmu:12506; -.
UCSC; uc007doz.1; mouse.
CTD; 962; -.
MGI; MGI:88339; Cd48.
eggNOG; ENOG502SB68; Eukaryota.
GeneTree; ENSGT00990000203564; -.
HOGENOM; CLU_099885_0_0_1; -.
InParanoid; P18181; -.
KO; K06479; -.
OMA; FDPVPKP; -.
OrthoDB; 986849at2759; -.
PhylomeDB; P18181; -.
TreeFam; TF334964; -.
Reactome; R-MMU-202733; Cell surface interactions at the vascular wall.
BioGRID-ORCS; 12506; 1 hit in 18 CRISPR screens.
ChiTaRS; Cd48; mouse.
EvolutionaryTrace; P18181; -.
PRO; PR:P18181; -.
Proteomes; UP000000589; Chromosome 1.
RNAct; P18181; protein.
Bgee; ENSMUSG00000015355; Expressed in bone marrow macrophage and 143 other tissues.
Genevisible; P18181; MM.
GO; GO:0046658; C:anchored component of plasma membrane; ISO:MGI.
GO; GO:0009897; C:external side of plasma membrane; IDA:MGI.
GO; GO:0045121; C:membrane raft; ISO:MGI.
GO; GO:0005886; C:plasma membrane; ISO:MGI.
GO; GO:0032991; C:protein-containing complex; ISO:MGI.
GO; GO:0003823; F:antigen binding; IEA:InterPro.
GO; GO:0038023; F:signaling receptor activity; IEA:InterPro.
GO; GO:0045576; P:mast cell activation; ISO:MGI.
GO; GO:0002819; P:regulation of adaptive immune response; IEA:InterPro.
GO; GO:0007165; P:signal transduction; IDA:MGI.
GO; GO:0042110; P:T cell activation; IDA:MGI.
Gene3D; 2.60.40.10; -; 2.
InterPro; IPR033548; CD48.
InterPro; IPR007110; Ig-like_dom.
InterPro; IPR036179; Ig-like_dom_sf.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR003599; Ig_sub.
InterPro; IPR013106; Ig_V-set.
PANTHER; PTHR12080:SF47; PTHR12080:SF47; 1.
Pfam; PF13895; Ig_2; 1.
Pfam; PF07686; V-set; 1.
SMART; SM00409; IG; 2.
SUPFAM; SSF48726; SSF48726; 2.
PROSITE; PS50835; IG_LIKE; 1.
1: Evidence at protein level;
3D-structure; Cell membrane; Direct protein sequencing; Disulfide bond;
Glycoprotein; GPI-anchor; Immunoglobulin domain; Lipoprotein; Membrane;
Reference proteome; Repeat; Signal.
SIGNAL 1..22
/evidence="ECO:0000269|PubMed:1383383"
CHAIN 23..217
/note="CD48 antigen"
/id="PRO_0000014883"
PROPEP 218..240
/note="Removed in mature form"
/id="PRO_0000014884"
DOMAIN 29..125
/note="Ig-like C2-type 1"
DOMAIN 129..209
/note="Ig-like C2-type 2"
LIPID 217
/note="GPI-anchor amidated serine"
/evidence="ECO:0000269|PubMed:1693656"
CARBOHYD 32
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
CARBOHYD 38
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
CARBOHYD 70
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
CARBOHYD 136
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
CARBOHYD 186
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
CARBOHYD 203
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
DISULFID 151..193
/evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
STRAND 30..34
/evidence="ECO:0000244|PDB:2PTT"
STRAND 39..41
/evidence="ECO:0000244|PDB:2PTT"
STRAND 52..59
/evidence="ECO:0000244|PDB:2PTT"
STRAND 62..68
/evidence="ECO:0000244|PDB:2PTT"
STRAND 73..75
/evidence="ECO:0000244|PDB:2PTT"
TURN 79..83
/evidence="ECO:0000244|PDB:2PTT"
STRAND 84..86
/evidence="ECO:0000244|PDB:2PTT"
TURN 88..90
/evidence="ECO:0000244|PDB:2PTT"
STRAND 93..97
/evidence="ECO:0000244|PDB:2PTT"
HELIX 100..102
/evidence="ECO:0000244|PDB:2PTT"
STRAND 104..115
/evidence="ECO:0000244|PDB:2PTT"
STRAND 118..125
/evidence="ECO:0000244|PDB:2PTT"
SEQUENCE 240 AA; 27383 MW; F3BF6987A9E9C71E CRC64;
MCFIKQGWCL VLELLLLPLG TGFQGHSIPD INATTGSNVT LKIHKDPLGP YKRITWLHTK
NQKILEYNYN STKTIFESEF KGRVYLEENN GALHISNVRK EDKGTYYMRV LRETENELKI
TLEVFDPVPK PSIEINKTEA STDSCHLRLS CEVKDQHVDY TWYESSGPFP KKSPGYVLDL
IVTPQNKSTF YTCQVSNPVS SKNDTVYFTL PCDLARSSGV CWTATWLVVT TLIIHRILLT


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WP897: Androgen receptor signaling pathway
WP2036: TWEAK Signaling Pathway
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WP364: IL-6 signaling pathway
WP1209: EBV LMP1 signaling
WP517: Notch Signaling Pathway
WP1348: Androgen Receptor Signaling Pathway
WP752: EGFR1 Signaling Pathway
WP1575: TOR signaling
WP849: IL-5 Signaling Pathway
WP1916: Signaling by PDGF

Related Genes :
[Cd48 Bcm-1] CD48 antigen (BCM1 surface antigen) (BLAST-1) (HM48-1) (MRC OX-45 surface antigen) (SLAM family member 2) (SLAMF2) (Signaling lymphocytic activation molecule 2) (sgp-60) (CD antigen CD48)
[CD84 SLAMF5] SLAM family member 5 (Cell surface antigen MAX.3) (Hly9-beta) (Leukocyte differentiation antigen CD84) (Signaling lymphocytic activation molecule 5) (CD antigen CD84)
[LY9 CDABP0070] T-lymphocyte surface antigen Ly-9 (Cell surface molecule Ly-9) (Lymphocyte antigen 9) (SLAM family member 3) (SLAMF3) (Signaling lymphocytic activation molecule 3) (CD antigen CD229)
[Ly9 Ly-9] T-lymphocyte surface antigen Ly-9 (Cell surface molecule Ly-9) (Lymphocyte antigen 9) (SLAM family member 3) (SLAMF3) (Signaling lymphocytic activation molecule 3) (CD antigen CD229)
[Cd84 Slamf5] SLAM family member 5 (Leukocyte differentiation antigen CD84) (Signaling lymphocytic activation molecule 5) (CD antigen CD84)
[Cd244 2b4 Nmrk] Natural killer cell receptor 2B4 (NK cell type I receptor protein 2B4) (NKR2B4) (Non-MHC restricted killing associated) (SLAM family member 4) (SLAMF4) (Signaling lymphocytic activation molecule 4) (CD antigen CD244)
[CD244 2B4] Natural killer cell receptor 2B4 (NK cell activation-inducing ligand) (NAIL) (NK cell type I receptor protein 2B4) (NKR2B4) (h2B4) (SLAM family member 4) (SLAMF4) (Signaling lymphocytic activation molecule 4) (CD antigen CD244)
[CD69 CLEC2C] Early activation antigen CD69 (Activation inducer molecule) (AIM) (BL-AC/P26) (C-type lectin domain family 2 member C) (EA1) (Early T-cell activation antigen p60) (GP32/28) (Leukocyte surface antigen Leu-23) (MLR-3) (CD antigen CD69)
[SLAMF1 SLAM] Signaling lymphocytic activation molecule (CDw150) (IPO-3) (SLAM family member 1) (CD antigen CD150)
[Slamf1 Slam] Signaling lymphocytic activation molecule (SLAM family member 1) (CD antigen CD150)
[SH2D1A DSHP SAP] SH2 domain-containing protein 1A (Duncan disease SH2-protein) (Signaling lymphocytic activation molecule-associated protein) (SLAM-associated protein) (T-cell signal transduction molecule SAP)
[SLC3A2 MDU1] 4F2 cell-surface antigen heavy chain (4F2hc) (4F2 heavy chain antigen) (Lymphocyte activation antigen 4F2 large subunit) (Solute carrier family 3 member 2) (CD antigen CD98)
[SIRPA BIT MFR MYD1 PTPNS1 SHPS1 SIRP] Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (Macrophage fusion receptor) (MyD-1 antigen) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (Signal-regulatory protein alpha-2) (Sirp-alpha-2) (Signal-regulatory protein alpha-3) (Sirp-alpha-3) (p84) (CD antigen CD172a)
[Sirpa Bit Myd1 Ptpns1 Shps1 Sirp] Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (MyD-1 antigen) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (mSIRP-alpha1) (p84) (CD antigen CD172a)
[Slamf7] SLAM family member 7 (Leukocyte cell-surface antigen) (Novel Ly9) (CD antigen CD319)
[EPCAM GA733-2 M1S2 M4S1 MIC18 TACSTD1 TROP1] Epithelial cell adhesion molecule (Ep-CAM) (Adenocarcinoma-associated antigen) (Cell surface glycoprotein Trop-1) (Epithelial cell surface antigen) (Epithelial glycoprotein) (EGP) (Epithelial glycoprotein 314) (EGP314) (hEGP314) (KS 1/4 antigen) (KSA) (Major gastrointestinal tumor-associated protein GA733-2) (Tumor-associated calcium signal transducer 1) (CD antigen CD326)
[Ceacam1 Bgp Bgp1] Carcinoembryonic antigen-related cell adhesion molecule 1 (Biliary glycoprotein 1) (BGP-1) (Biliary glycoprotein D) (MHVR1) (Murine hepatitis virus receptor) (MHV-R) (CD antigen CD66a)
[FAS APT1 FAS1 TNFRSF6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)
[SLAMF1 SLAM] Signaling lymphocytic activation molecule (CD antigen CD150)
[Sirpa Bit Mfr Ptpns1 Shps1 Sirp] Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (Macrophage fusion receptor) (Macrophage membrane protein MFP150) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (CD antigen CD172a)
[Slc3a2 Mdu1] 4F2 cell-surface antigen heavy chain (4F2hc) (Solute carrier family 3 member 2) (CD antigen CD98)
[Cd86] T-lymphocyte activation antigen CD86 (Activation B7-2 antigen) (Early T-cell costimulatory molecule 1) (ETC-1) (CD antigen CD86)
[CD19] B-lymphocyte antigen CD19 (B-lymphocyte surface antigen B4) (Differentiation antigen CD19) (T-cell surface antigen Leu-12) (CD antigen CD19)
[Fas Apt1 Tnfrsf6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)
[SLAMF6 KALI UNQ6123/PRO20080] SLAM family member 6 (Activating NK receptor) (NK-T-B-antigen) (NTB-A) (CD antigen CD352)
[Fas Apt1 Tnfrsf6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)
[Cd8a] T-cell surface glycoprotein CD8 alpha chain (CD8 antigen 32 kDa chain) (OX-8 membrane antigen) (CD antigen CD8a)
[BCAM LU MSK19] Basal cell adhesion molecule (Auberger B antigen) (B-CAM cell surface glycoprotein) (F8/G253 antigen) (Lutheran antigen) (Lutheran blood group glycoprotein) (CD antigen CD239)
[CD86 CD28LG2] T-lymphocyte activation antigen CD86 (Activation B7-2 antigen) (B70) (BU63) (CTLA-4 counter-receptor B7.2) (FUN-1) (CD antigen CD86)
[Cd79a Iga Mb-1] B-cell antigen receptor complex-associated protein alpha chain (Ig-alpha) (MB-1 membrane glycoprotein) (Membrane-bound immunoglobulin-associated protein) (Surface IgM-associated protein) (CD antigen CD79a)

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