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Carbohydrate metabolism regulator TYE7

 TYE7_CANAL              Reviewed;         269 AA.
Q5AL36; A0A1D8PFK6;
26-JUN-2013, integrated into UniProtKB/Swiss-Prot.
26-APR-2005, sequence version 1.
11-DEC-2019, entry version 108.
RecName: Full=Carbohydrate metabolism regulator TYE7;
Name=TYE7; OrderedLocusNames=CAALFM_C113140CA;
ORFNames=CaO19.12407, CaO19.4941;
Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast).
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida.
NCBI_TaxID=237561;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=15123810; DOI=10.1073/pnas.0401648101;
Jones T., Federspiel N.A., Chibana H., Dungan J., Kalman S., Magee B.B.,
Newport G., Thorstenson Y.R., Agabian N., Magee P.T., Davis R.W.,
Scherer S.;
"The diploid genome sequence of Candida albicans.";
Proc. Natl. Acad. Sci. U.S.A. 101:7329-7334(2004).
[2]
GENOME REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=17419877; DOI=10.1186/gb-2007-8-4-r52;
van het Hoog M., Rast T.J., Martchenko M., Grindle S., Dignard D.,
Hogues H., Cuomo C., Berriman M., Scherer S., Magee B.B., Whiteway M.,
Chibana H., Nantel A., Magee P.T.;
"Assembly of the Candida albicans genome into sixteen supercontigs aligned
on the eight chromosomes.";
Genome Biol. 8:RESEARCH52.1-RESEARCH52.12(2007).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND GENOME REANNOTATION.
STRAIN=SC5314 / ATCC MYA-2876;
PubMed=24025428; DOI=10.1186/gb-2013-14-9-r97;
Muzzey D., Schwartz K., Weissman J.S., Sherlock G.;
"Assembly of a phased diploid Candida albicans genome facilitates allele-
specific measurements and provides a simple model for repeat and indel
structure.";
Genome Biol. 14:RESEARCH97.1-RESEARCH97.14(2013).
[4]
INDUCTION.
PubMed=12388749; DOI=10.1091/mbc.e02-05-0272;
Nantel A., Dignard D., Bachewich C., Harcus D., Marcil A., Bouin A.P.,
Sensen C.W., Hogues H., van het Hoog M., Gordon P., Rigby T., Benoit F.,
Tessier D.C., Thomas D.Y., Whiteway M.;
"Transcription profiling of Candida albicans cells undergoing the yeast-to-
hyphal transition.";
Mol. Biol. Cell 13:3452-3465(2002).
[5]
INDUCTION.
PubMed=15273122; DOI=10.1128/aac.48.8.3064-3079.2004;
Karababa M., Coste A.T., Rognon B., Bille J., Sanglard D.;
"Comparison of gene expression profiles of Candida albicans azole-resistant
clinical isolates and laboratory strains exposed to drugs inducing
multidrug transporters.";
Antimicrob. Agents Chemother. 48:3064-3079(2004).
[6]
INDUCTION.
PubMed=15201233; DOI=10.1093/jac/dkh336;
Barker K.S., Crisp S., Wiederhold N., Lewis R.E., Bareither B.,
Eckstein J., Barbuch R., Bard M., Rogers P.D.;
"Genome-wide expression profiling reveals genes associated with
amphotericin B and fluconazole resistance in experimentally induced
antifungal resistant isolates of Candida albicans.";
J. Antimicrob. Chemother. 54:376-385(2004).
[7]
INDUCTION.
PubMed=15917516; DOI=10.1128/aac.49.6.2226-2236.2005;
Liu T.T., Lee R.E., Barker K.S., Lee R.E., Wei L., Homayouni R.,
Rogers P.D.;
"Genome-wide expression profiling of the response to azole, polyene,
echinocandin, and pyrimidine antifungal agents in Candida albicans.";
Antimicrob. Agents Chemother. 49:2226-2236(2005).
[8]
INDUCTION.
PubMed=16002644; DOI=10.1128/ec.4.7.1175-1190.2005;
Zhao R., Daniels K.J., Lockhart S.R., Yeater K.M., Hoyer L.L., Soll D.R.;
"Unique aspects of gene expression during Candida albicans mating and
possible G(1) dependency.";
Eukaryot. Cell 4:1175-1190(2005).
[9]
INDUCTION.
PubMed=17605131; DOI=10.1002/yea.1514;
Sexton J.A., Brown V., Johnston M.;
"Regulation of sugar transport and metabolism by the Candida albicans Rgt1
transcriptional repressor.";
Yeast 24:847-860(2007).
[10]
FUNCTION, AND DNA-BINDING.
PubMed=19816560; DOI=10.1371/journal.ppat.1000612;
Askew C., Sellam A., Epp E., Hogues H., Mullick A., Nantel A., Whiteway M.;
"Transcriptional regulation of carbohydrate metabolism in the human
pathogen Candida albicans.";
PLoS Pathog. 5:E1000612-E1000612(2009).
[11]
FUNCTION.
PubMed=21414038; DOI=10.1111/j.1365-2958.2011.07626.x;
Bonhomme J., Chauvel M., Goyard S., Roux P., Rossignol T., d'Enfert C.;
"Contribution of the glycolytic flux and hypoxia adaptation to efficient
biofilm formation by Candida albicans.";
Mol. Microbiol. 80:995-1013(2011).
-!- FUNCTION: Key transcriptional regulator of carbohydrate metabolism.
Binds the promoter sequences of the glycolytic genes at the CANNTG
motif and activates their expression during growth on either
fermentable or non-fermentable carbon sources as well as under hypoxic
growth conditions. Complete glycolytic activation by GAL4 and TYE7 is
required for full virulence. Involved in biofilm formation and
negatively regulates hyphal formation under hypoxia. Controls also the
expression of the copper transport protein CTR1.
{ECO:0000269|PubMed:19816560, ECO:0000269|PubMed:21414038}.
-!- SUBUNIT: Efficient DNA binding requires dimerization with another bHLH
protein.
-!- SUBCELLULAR LOCATION: Nucleus.
-!- INDUCTION: Expression is controlled by RTG1 and is down-regulated
during mating process, yeast-to-hyphal transition, and in presence of
benomyl, amphotericin B, and caspofungin. {ECO:0000269|PubMed:12388749,
ECO:0000269|PubMed:15201233, ECO:0000269|PubMed:15273122,
ECO:0000269|PubMed:15917516, ECO:0000269|PubMed:16002644,
ECO:0000269|PubMed:17605131}.
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EMBL; CP017623; AOW26923.1; -; Genomic_DNA.
RefSeq; XP_722152.1; XM_717059.1.
SMR; Q5AL36; -.
STRING; 5476.C4YG20; -.
PRIDE; Q5AL36; -.
GeneID; 3636203; -.
KEGG; cal:CAALFM_C113140CA; -.
CGD; CAL0000180094; TYE7.
EuPathDB; FungiDB:C1_13140C_A; -.
InParanoid; Q5AL36; -.
KO; K09074; -.
OMA; SQKKAHN; -.
OrthoDB; 1574461at2759; -.
PRO; PR:Q5AL36; -.
Proteomes; UP000000559; Chromosome 1.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0003700; F:DNA-binding transcription factor activity; IDA:CGD.
GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:CGD.
GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
GO; GO:0045991; P:carbon catabolite activation of transcription; IMP:CGD.
GO; GO:0071456; P:cellular response to hypoxia; IMP:CGD.
GO; GO:0030447; P:filamentous growth; IMP:CGD.
GO; GO:0044182; P:filamentous growth of a population of unicellular organisms; IMP:CGD.
GO; GO:1900429; P:negative regulation of filamentous growth of a population of unicellular organisms; IMP:CGD.
GO; GO:0009405; P:pathogenesis; IMP:CGD.
GO; GO:0045821; P:positive regulation of glycolytic process; IMP:CGD.
GO; GO:1900233; P:positive regulation of single-species biofilm formation on inanimate substrate; IMP:CGD.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:CGD.
GO; GO:0044011; P:single-species biofilm formation on inanimate substrate; IMP:CGD.
CDD; cd00083; HLH; 1.
Gene3D; 4.10.280.10; -; 1.
InterPro; IPR011598; bHLH_dom.
InterPro; IPR036638; HLH_DNA-bd_sf.
Pfam; PF00010; HLH; 1.
SMART; SM00353; HLH; 1.
SUPFAM; SSF47459; SSF47459; 1.
PROSITE; PS50888; BHLH; 1.
1: Evidence at protein level;
Carbohydrate metabolism; Nucleus; Reference proteome; Transcription;
Transcription regulation; Virulence.
CHAIN 1..269
/note="Carbohydrate metabolism regulator TYE7"
/id="PRO_0000422813"
DOMAIN 173..244
/note="bHLH"
/evidence="ECO:0000255|PROSITE-ProRule:PRU00981"
COMPBIAS 11..18
/note="Poly-Asn"
SEQUENCE 269 AA; 30525 MW; A59013640B69F505 CRC64;
MSSFQQENQL NANNNNNNVM NEYISYSVPL SPVTTNENPQ DYWMNGLIAN SVPISQTTSN
SDINYSQPPN PINFNSIFEG VNIFSNDDFT SSSNDISLAN SPETNATSDS IAQNLDEVKV
KLENHNQARL DALEFAFETK SILKEQPKIK QEPGTKAATK PKRRAPRKKL TESQKKAHNK
IEKRYRININ AKIAGIQKII PWVAFEKTAF ETGEENETEA EAKNNTRLNK SMILEKATEY
ILHLQKKEEE YMAENQKLRE QVIKLGGEI


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Related Genes :
[TYE7 CAALFM_C113140CA CaO19.12407 CaO19.4941] Carbohydrate metabolism regulator TYE7
[TYE7 SGC1 YOR344C O6233] Serine-rich protein TYE7 (Basic-helix-loop-helix protein SGC1)
[BRG1 GAT2 CAALFM_C105140WA CaO19.11538 CaO19.4056] Biofilm regulator 1
[fadR oleR thdB b1187 JW1176] Fatty acid metabolism regulator protein
[veA ANIA_01052] Developmental and secondary metabolism regulator veA (Velvet complex subunit A)
[laeA ANIA_00807] Secondary metabolism regulator laeA (Methyltransferase laeA) (EC 2.1.1.-) (Velvet complex subunit laeA)
[IDD14 At1g68130 T23K23.2] Protein indeterminate-domain 14 (AtIDD14) (Transcriptional regulator of starch metabolism IDD14)
[cymR yrzC BSU27520] HTH-type transcriptional regulator CymR (Cysteine metabolism repressor)
[veA AFUA_1G12490] Developmental and secondary metabolism regulator veA (Velvet complex subunit A)
[GAL80 YML051W YM9827.01 YM9958.12] Galactose/lactose metabolism regulatory protein GAL80
[laeA AFUA_1G14660] Secondary metabolism regulator laeA (Methyltransferase laeA) (EC 2.1.1.-) (Velvet complex subunit laeA)
[atoC az b2220 JW2214] Regulatory protein AtoC (Acetoacetate metabolism regulatory protein) (DNA-binding transcriptional regulator AtoC) (Ornithine decarboxylase antizyme)
[TPS1 BYP1 CIF1 FDP1 GGS1 GLC6 TSS1 YBR126C YBR0922] Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 56 kDa subunit (EC 2.4.1.15) (General glucose sensor subunit 1) (Glycogen metabolism control protein GLC6) (Trehalose synthase complex catalytic subunit TPS1) (Trehalose-6-phosphate synthase) (UDP-glucose-glucosephosphate glucosyltransferase)
[GATA21 GNC At5g56860 MPI10.2] GATA transcription factor 21 (Protein GATA, NITRATE-INDUCIBLE, CARBON-METABOLISM INVOLVED) (AtGNC)
[CTR1 CAALFM_C600790CA CaO19.11130 CaO19.3646] Copper transport protein CTR1
[VTC1 NRF1 PHM4 YER072W] Vacuolar transporter chaperone 1 (Negative regulator of CDC42 protein 1) (Phosphate metabolism protein 4)
[kgd Rv1248c] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
[kgd sucA MSMEG_5049 MSMEI_4922] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
[VEL1 VeA TRIREDRAFT_122284] Developmental and secondary metabolism regulator VEL1 (Velvet complex subunit 1)
[kgd MRA_1256] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
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[kgd BQ2027_MB1280C] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
[csrA zfiA b2696 JW2666] Carbon storage regulator (Translational dual regulator CsrA)
[kgd Mkms_4047] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
[kgd Mjls_3987] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]
[kgd Mmcs_3973] Multifunctional 2-oxoglutarate metabolism enzyme (2-hydroxy-3-oxoadipate synthase) (HOA synthase) (HOAS) (EC 2.2.1.5) (2-oxoglutarate carboxy-lyase) (2-oxoglutarate decarboxylase) (Alpha-ketoglutarate decarboxylase) (KG decarboxylase) (KGD) (EC 4.1.1.71) (Alpha-ketoglutarate-glyoxylate carboligase) [Includes: 2-oxoglutarate dehydrogenase E1 component (ODH E1 component) (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase E1 component) (KDH E1 component); Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (2-oxoglutarate dehydrogenase complex E2 component) (ODH E2 component) (OGDC-E2) (Dihydrolipoamide succinyltransferase)]

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