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Chromodomain helicase hrp3 (EC 3.6.4.-)

 A0A0F8CRB6_CERFI        Unreviewed;      1614 AA.
A0A0F8CRB6;
22-JUL-2015, integrated into UniProtKB/TrEMBL.
22-JUL-2015, sequence version 1.
03-JUL-2019, entry version 25.
SubName: Full=Chromodomain helicase hrp3 {ECO:0000313|EMBL:KKF93297.1};
EC=3.6.4.- {ECO:0000313|EMBL:KKF93297.1};
Name=hrp3 {ECO:0000313|EMBL:KKF93297.1};
ORFNames=CFO_g4353 {ECO:0000313|EMBL:KKF93297.1};
Ceratocystis fimbriata f. sp. platani.
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Hypocreomycetidae; Microascales; Ceratocystidaceae;
Ceratocystis.
NCBI_TaxID=88771 {ECO:0000313|EMBL:KKF93297.1};
[1] {ECO:0000313|EMBL:KKF93297.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CFO {ECO:0000313|EMBL:KKF93297.1};
Belbahri L.;
"Genome sequence of Ceratocystis platani, a major pathogen of plane
trees.";
Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00539527}.
-!- CAUTION: The sequence shown here is derived from an
EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
preliminary data. {ECO:0000313|EMBL:KKF93297.1}.
-----------------------------------------------------------------------
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EMBL; LBBL01000257; KKF93297.1; -; Genomic_DNA.
EnsemblFungi; KKF93297; KKF93297; CFO_g4353.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
CDD; cd00024; CHROMO; 1.
CDD; cd00079; HELICc; 1.
Gene3D; 3.40.50.10810; -; 1.
InterPro; IPR016197; Chromo-like_dom_sf.
InterPro; IPR000953; Chromo/chromo_shadow_dom.
InterPro; IPR023780; Chromo_domain.
InterPro; IPR023779; Chromodomain_CS.
InterPro; IPR025260; DUF4208.
InterPro; IPR014001; Helicase_ATP-bd.
InterPro; IPR001650; Helicase_C.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR038718; SNF2-like_sf.
InterPro; IPR000330; SNF2_N.
Pfam; PF00385; Chromo; 1.
Pfam; PF13907; DUF4208; 1.
Pfam; PF00271; Helicase_C; 1.
Pfam; PF00176; SNF2_N; 1.
SMART; SM00298; CHROMO; 2.
SMART; SM00487; DEXDc; 1.
SMART; SM01176; DUF4208; 1.
SMART; SM00490; HELICc; 1.
SUPFAM; SSF52540; SSF52540; 2.
SUPFAM; SSF54160; SSF54160; 2.
PROSITE; PS00598; CHROMO_1; 1.
PROSITE; PS50013; CHROMO_2; 2.
PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PROSITE; PS51194; HELICASE_CTER; 1.
4: Predicted;
ATP-binding {ECO:0000313|EMBL:KKF93297.1};
Coiled coil {ECO:0000256|SAM:Coils};
Helicase {ECO:0000313|EMBL:KKF93297.1};
Hydrolase {ECO:0000313|EMBL:KKF93297.1};
Nucleotide-binding {ECO:0000313|EMBL:KKF93297.1};
Nucleus {ECO:0000256|SAAS:SAAS00421658}.
DOMAIN 259 311 Chromo. {ECO:0000259|PROSITE:PS50013}.
DOMAIN 348 409 Chromo. {ECO:0000259|PROSITE:PS50013}.
DOMAIN 447 618 Helicase ATP-binding.
{ECO:0000259|PROSITE:PS51192}.
DOMAIN 750 911 Helicase C-terminal.
{ECO:0000259|PROSITE:PS51194}.
REGION 1 241 Disordered. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
REGION 1045 1081 Disordered. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
REGION 1305 1485 Disordered. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COILED 1008 1028 {ECO:0000256|SAM:Coils}.
COILED 1126 1146 {ECO:0000256|SAM:Coils}.
COMPBIAS 16 33 Polar. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COMPBIAS 87 113 Polyampholyte. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COMPBIAS 125 147 Polyampholyte. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COMPBIAS 148 182 Polar. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COMPBIAS 225 241 Acidic. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
COMPBIAS 1335 1485 Polyampholyte. {ECO:0000256|MobiDB-
lite:A0A0F8CRB6}.
SEQUENCE 1614 AA; 186715 MW; 33A6CAFF684363E5 CRC64;
MSDSDQDDID VVDQMSGSEL SESSPSAHAS HNGISYDHDT AYPHDESDAS ENASEDVSGD
GDYDMEEQSV QSAVEDSVEE VEEEDDVQST SASRRGTKRK MTVDEDEYIK NNPELYGLRR
SSRAVQTRKI ADSDSDSDSD ETPSSRQPTK RRVVNSRAAS KRSTPVTTSR RVSDSDSDSD
VYGGQKGKSL RKKARRARQS SSNTPLTEKR VSRAAARVQQ GAYEESDFDS EDDEEPGWRE
QEAEIDDSPY VGEVIGHRLL PDRELSLYSS KADYEYNIRW QGSSHMHATW QDWETLRETR
GFRKVENYFR KTVEADKRVI LEIDVTPEQR EQFLMDKERS EEALEDYKKV ERVVAVRSDE
EGRTEYYIKW KGLTYQDCTW EDAQDISGKF QDKIDQFLDR QSRSWISDRR ESNLDTRSPF
TKLDAQPEYI TGGQLRPFQL RGLQFLALNW TRGNNVILAD EMGLGKTVQS VSFLSWLLNS
RGQEGPFMVV APLSVVPAWC DTFDLWAPEI NYVTYLGPES ARTIIRNNEM MINGNPKRPK
FNVLVTSYDY IMADVSFFQQ FKWQVLAVDE AHRLKNRESQ LYAKLVNLNV PCKVLITGTP
IQNNLGELAA LMDFLNPGKV TINSDIESLS AADAQNQLQE LHKSIAPYIL RRTKETVESD
LPPKTEKIIR VELSDLQLEC YKAVLTKNYS ALCNATGGQK NSLLNIMMEL KKVSNHPYMI
NGVEKQLLNG NESRENTMKS LVTSSGKMML LDQLLTKLKR DGHRVLIFSQ MVAMLDLLGE
YLNFRGYKYQ RLDGTINASA RRLSINHFNA EDSDDFCFLL STRAGGLGIN LMTADTVIIF
DSDWNPQADL QAMARAHRIG QKKPVNIYRL VSKETVEEEV LERARNKLLL EYLTIQAGLT
DDDASMRQEM DRRGLKMDGP SSSEDIQMVL RMRSQKMFEQ SGNQERLEQL DIDKILETAE
VTKTAVTDKM NLSNGGIDWD SFMQYTDVKV DGLAMDWDDI IPEDQLTQLK EEEQKRQHEE
YLEKMREENA PRKATLKSRI AIDSDDRADR LAKKRQRELQ KEHDQENRRA MQLDPRRPLS
ERQQRNLIRA LQRYGSMEDR GDEIVQDAKL ADRDRGVISD FVNSFISECK RVVEEHAARI
QEEEKKHGKS LAKKDKKAVL FDFGVLKKVN AETPVERPPQ LRMLRLALSN TSDWRSFRLP
EATKSAHYSC PWGAREDGML LVGIDRYGFG AWTQIRDDVE LDMQNKFFLE EHRIEKKEER
TKGGDKIKAP GAVHLTRRAE YLLTVVYAKY SNDVAAQRIV ENHHRTNKKL AGTNGLRRPD
TGSPAPSMSR NGSGNRAREA DRPRADAKRR GAYGDERAPK RRPEETRRRS NSREREPDSP
KRKRRDEDEA RVPKHRRVDD DRRDARRDDR YRDDRRRVED PRREGRRDDH RDREWDRDHR
DRERDRDRER DRERDRDRDR DRSHRKSDRR DDYGPRSDSA SEDARARALR RLAELRRQGD
HLAELENPDN DTLLWLLLKP VRQNFERILD TTKERVRSNK DRAKIYGDEL LVIGDFLENE
IRGSKVEKST RDGFWKFLAD LWPVESVPLN GEKLHRMYDL LVSRRDRQSS GGRV


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Related Genes :
[Chd8 Kiaa1564] Chromodomain-helicase-DNA-binding protein 8 (CHD-8) (EC 3.6.4.12) (ATP-dependent helicase CHD8) (Axis duplication inhibitor) (Duplin)
[CHD6 CHD5 KIAA1335 RIGB] Chromodomain-helicase-DNA-binding protein 6 (CHD-6) (EC 3.6.4.12) (ATP-dependent helicase CHD6) (Radiation-induced gene B protein)
[CHD3] Chromodomain-helicase-DNA-binding protein 3 (CHD-3) (EC 3.6.4.12) (ATP-dependent helicase CHD3) (Mi-2 autoantigen 240 kDa protein) (Mi2-alpha) (Zinc finger helicase) (hZFH)
[CHD7 KIAA1416] Chromodomain-helicase-DNA-binding protein 7 (CHD-7) (EC 3.6.4.12) (ATP-dependent helicase CHD7)
[Chd1 Chd-1] Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase CHD1)
[CHD1] Chromodomain-helicase-DNA-binding protein 1 (CHD-1) (EC 3.6.4.12) (ATP-dependent helicase CHD1)
[CHD2] Chromodomain-helicase-DNA-binding protein 2 (CHD-2) (EC 3.6.4.12) (ATP-dependent helicase CHD2)
[Chd6 Kiaa1335] Chromodomain-helicase-DNA-binding protein 6 (CHD-6) (EC 3.6.4.12) (ATP-dependent helicase CHD6)
[hchA A9819_11910 ACN81_03425 AML35_08765 AW059_23935 BANRA_00208 BANRA_00433 BANRA_02614 BHF46_18455 BMT91_24760 C4J69_22715 C7B08_25495 CR538_10415 D2F89_25795 D3Y67_22910 D9G42_11130 D9I97_22010 D9J11_25195 DP258_02540 EC3234A_36c00010 EC382_21100 ECTO6_01955 EFV06_13085 EFV16_12340 NCTC8500_02249 NCTC9037_02122 NCTC9117_02637 NCTC9969_02156 SAMEA3472108_01151 SAMEA3484427_04795 SAMEA3484429_02051 SAMEA3752557_05476 SAMEA3752559_04333] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[Ddx1] ATP-dependent RNA helicase DDX1 (EC 3.6.4.13) (DEAD box protein 1)
[Eif4a3 Ddx48] Eukaryotic initiation factor 4A-III (eIF-4A-III) (eIF4A-III) (EC 3.6.4.13) (ATP-dependent RNA helicase DDX48) (ATP-dependent RNA helicase eIF4A-3) (DEAD box protein 48) (Eukaryotic translation initiation factor 4A isoform 3) [Cleaved into: Eukaryotic initiation factor 4A-III, N-terminally processed]
[] Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (p23) (EC 3.4.22.-); Serine protease NS3 (EC 3.4.21.98) (EC 3.6.1.15) (EC 3.6.4.13) (Hepacivirin) (NS3P) (p70); Non-structural protein 4A (NS4A) (p8); Non-structural protein 4B (NS4B) (p27); Non-structural protein 5A (NS5A) (p56); RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[Dhx9 Ddx9] ATP-dependent RNA helicase A (EC 3.6.4.13) (DEAH box protein 9) (mHEL-5) (Nuclear DNA helicase II) (NDH II) (RNA helicase A) (RHA)
[rep 1a-1b] Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); Serine protease nsp4 (3CLSP) (EC 3.4.21.-) (3C-like serine proteinase) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 5 (Nsp5); Non-structural protein 6 (Nsp6); Non-structural protein 7-alpha (Nsp7-alpha); Non-structural protein 7-beta (Nsp7-beta); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase nsp10 (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
[rep 1a-1b] Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-beta); Nsp2 cysteine proteinase (EC 3.4.19.12) (EC 3.4.22.-) (CP2) (CP); Non-structural protein 3 (Nsp3); Serine protease nsp4 (3CLSP) (EC 3.4.21.-) (3C-like serine proteinase) (Nsp4); Non-structural protein 5-6-7 (Nsp5-6-7); Non-structural protein 5 (Nsp5); Non-structural protein 6 (Nsp6); Non-structural protein 7-alpha (Nsp7-alpha); Non-structural protein 7-beta (Nsp7-beta); Non-structural protein 8 (Nsp8); RNA-directed RNA polymerase (Pol) (RdRp) (EC 2.7.7.48) (Nsp9); Helicase nsp10 (Hel) (EC 3.6.4.12) (EC 3.6.4.13) (Nsp10); Non-structural protein 11 (Nsp11); Non-structural protein 12 (Nsp12)]
[NAV2 HELAD1 KIAA1419 POMFIL2 RAINB1 STEERIN2] Neuron navigator 2 (EC 3.6.4.12) (Helicase APC down-regulated 1) (Pore membrane and/or filament-interacting-like protein 2) (Retinoic acid inducible in neuroblastoma 1) (Steerin-2) (Unc-53 homolog 2) (unc53H2)
[Dhx36 Ddx36 Kiaa1488 Mlel1] ATP-dependent DNA/RNA helicase DHX36 (EC 3.6.4.13) (DEAD/H box polypeptide 36) (DEAH box protein 36) (MLE-like protein 1) (RNA helicase associated with AU-rich element ARE)
[Smarca4 Baf190a Brg1 Snf2b Snf2l4] Transcription activator BRG1 (EC 3.6.4.-) (ATP-dependent helicase SMARCA4) (BRG1-associated factor 190A) (BAF190A) (Protein brahma homolog 1) (SNF2-beta) (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4)
[Ddx3x D1Pas1-rs2 Ddx3 Dead3 Erh] ATP-dependent RNA helicase DDX3X (EC 3.6.4.13) (D1Pas1-related sequence 2) (DEAD box RNA helicase DEAD3) (mDEAD3) (DEAD box protein 3, X-chromosomal) (Embryonic RNA helicase)
[Wrn] Werner syndrome ATP-dependent helicase homolog (EC 3.6.4.12) (Exonuclease WRN) (EC 3.1.-.-)
[Chd3 CG9594] Chromodomain-helicase-DNA-binding protein 3 (EC 3.6.4.12) (ATP-dependent helicase Chd3)
[Pif1] ATP-dependent DNA helicase PIF1 (EC 3.6.4.12) (DNA repair and recombination helicase PIF1) (Pif1/Rrm3 DNA helicase-like protein)

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