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Cytochrome c oxidase subunit 1 (EC 1.9.3.1)

 Q5EXF0_9SALA            Unreviewed;       515 AA.
Q5EXF0;
15-MAR-2005, integrated into UniProtKB/TrEMBL.
15-MAR-2005, sequence version 1.
08-MAY-2019, entry version 69.
RecName: Full=Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369};
EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};
Name=COX1 {ECO:0000313|EMBL:AAT49225.1};
Ambystoma andersoni (Anderson's salamander).
Mitochondrion {ECO:0000313|EMBL:AAT49225.1}.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Caudata; Salamandroidea; Ambystomatidae;
Ambystoma.
NCBI_TaxID=282260 {ECO:0000313|EMBL:AAT49225.1};
[1] {ECO:0000313|EMBL:AAT49225.1}
NUCLEOTIDE SEQUENCE.
PubMed=15780978; DOI=10.1016/j.gene.2004.12.037;
Samuels A.K., Weisrock D.W., Smith J.J., France K.J., Walker J.A.,
Putta S., Voss S.R.;
"Transcriptional and phylogenetic analysis of five complete
ambystomatid salamander mitochondrial genomes.";
Gene 349:43-53(2005).
-!- FUNCTION: Cytochrome c oxidase is the component of the respiratory
chain that catalyzes the reduction of oxygen to water. Subunits 1-
3 form the functional core of the enzyme complex. CO I is the
catalytic subunit of the enzyme. Electrons originating in
cytochrome c are transferred via the copper A center of subunit 2
and heme A of subunit 1 to the bimetallic center formed by heme A3
and copper B. {ECO:0000256|RuleBase:RU000369}.
-!- CATALYTIC ACTIVITY:
Reaction=4 [Fe(II)cytochrome c] + 4 H(+) + O2 = 4
[Fe(III)cytochrome c] + 2 H2O; Xref=Rhea:RHEA:11436, Rhea:RHEA-
COMP:10350, Rhea:RHEA-COMP:14399, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:15379, ChEBI:CHEBI:29033,
ChEBI:CHEBI:29034; EC=1.9.3.1;
Evidence={ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS01116619};
-!- PATHWAY: Energy metabolism; oxidative phosphorylation.
{ECO:0000256|RuleBase:RU000369, ECO:0000256|SAAS:SAAS00887552}.
-!- SUBCELLULAR LOCATION: Mitochondrion inner membrane
{ECO:0000256|RuleBase:RU000369}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU000369}.
-!- SIMILARITY: Belongs to the heme-copper respiratory oxidase family.
{ECO:0000256|RuleBase:RU000369}.
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EMBL; AY659993; AAT49225.1; -; Genomic_DNA.
RefSeq; YP_214786.1; NC_006888.1.
GeneID; 3332328; -.
CTD; 4512; -.
UniPathway; UPA00705; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:UniProtKB-SubCell.
GO; GO:0045277; C:respiratory chain complex IV; IEA:InterPro.
GO; GO:0004129; F:cytochrome-c oxidase activity; IEA:UniProtKB-EC.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0009060; P:aerobic respiration; IEA:InterPro.
GO; GO:0006119; P:oxidative phosphorylation; IEA:UniProtKB-UniPathway.
CDD; cd01663; Cyt_c_Oxidase_I; 1.
Gene3D; 1.20.210.10; -; 1.
InterPro; IPR023616; Cyt_c_oxase-like_su1_dom.
InterPro; IPR036927; Cyt_c_oxase-like_su1_sf.
InterPro; IPR000883; Cyt_C_Oxase_1.
InterPro; IPR023615; Cyt_c_Oxase_su1_BS.
InterPro; IPR033944; Cyt_c_oxase_su1_dom.
PANTHER; PTHR10422; PTHR10422; 1.
Pfam; PF00115; COX1; 1.
PRINTS; PR01165; CYCOXIDASEI.
SUPFAM; SSF81442; SSF81442; 1.
PROSITE; PS50855; COX1; 1.
PROSITE; PS00077; COX1_CUB; 1.
3: Inferred from homology;
Copper {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAAS:SAAS00887236};
Electron transport {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711106};
Heme {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAAS:SAAS00711161};
Iron {ECO:0000256|RuleBase:RU000369, ECO:0000256|SAAS:SAAS00711161};
Membrane {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711122, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711161};
Mitochondrion {ECO:0000256|RuleBase:RU000369};
Mitochondrion inner membrane {ECO:0000256|RuleBase:RU000369};
Oxidoreductase {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711097};
Respiratory chain {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711106};
Transmembrane {ECO:0000256|SAAS:SAAS00711122,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00711122,
ECO:0000256|SAM:Phobius};
Transport {ECO:0000256|RuleBase:RU000369,
ECO:0000256|SAAS:SAAS00711106}.
TRANSMEM 16 37 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 57 83 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 104 128 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 148 171 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 183 210 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 243 261 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 268 291 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 303 325 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 337 359 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 379 400 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 412 430 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 450 473 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 1 511 COX1. {ECO:0000259|PROSITE:PS50855}.
SEQUENCE 515 AA; 56887 MW; 031C1D572B853F8F CRC64;
MMITRWLFST NHKDIGALYL VFGAWAGMVG TALSLLIRAE LSQPGALLGD DQIYNVIVTA
HAFVMIFFMV MPVMIGGFGN WLVPLMIGAP DMAFPRMNNM SFWLLPPSFL LLLASSGVEA
GAGTGWTVYP PLAGNLAHAG ASVDLTIFSL HLAGVSSILG AINFITTSIN MKPASMSQYQ
TPLFVWSVLI TAVLLLLSLP VLAAGITMLL TDRNLNTTFF DPAGGGDPVL YQHLFWFFGH
PEVYILILPG FGMISHIVTY YSAKKEPFGY MGMAWTMMSI GLLGFIVWAH HMFTVDLNVD
TRAYFTSATM IIAIPTGVKV FSWLATMHGG AIKWDAAMLW ALGFIFLFTV GGLTGIVLAN
SSLDIVLHDT YYVVAHFHYV LSMGAVFAIM GGFVHWFPLF SGYTLHSTWS KIHFGVMFIG
VNLTFFPQHF LGLAGMPRRY SDYPDAYTLW NTISSIGSLI SLVAVIMMMF IIWEAFASKR
EVLSTELTST NIEWLHNCPP PYHTFEEPSF VQSRI


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WP1655: Geraniol degradation
WP677: Momilactone biosynthesis
WP1672: Mismatch repair
WP1194: cytochrome P450
WP1694: Pyrimidine metabolism
WP2272: Pathogenic Escherichia coli infection
WP1390: cytochrome P450
WP1614: 1- and 2-Methylnaphthalene degradation
WP2430: Quercetin metabolism
WP626: Abscisic Acid Biosynthesis
WP1644: DNA replication
WP1671: Methane metabolism
WP958: cytochrome P450
WP1077: cytochrome P450
WP1693: Purine metabolism
WP1718: Vitamin B6 metabolism
WP1274: cytochrome P450
WP1566: Citrate cycle (TCA cycle)
WP2316: PPAR signaling pathway

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[hchA A8C65_13880 A9R57_25255 AKG99_20940 AMK83_16550 B7C53_22525 B9M99_11580 B9T59_01945 BJJ90_15205 BMT49_12710 BMT53_00170 BUE81_10670 BW690_17225 BZL69_29425 C2U48_24800 C5715_19445 C5N07_21380 C6669_19295 C7B06_02290 C7B07_03930 CDL37_00765 CG691_19145 CG705_13560 CG706_14580 CIJ94_05515 COD46_23180 CQP61_17160 CRD98_26150 CY655_12940 D5618_21870 D8K42_21280 D8Y29_11125 D9D20_21030 D9D43_06110 D9E22_21005 D9H68_20750 D9H70_25730 D9I87_15275 DL800_09215 DNQ41_14245 DQE83_22775 DTL43_21780 DTM25_06080 DU321_04440 E2855_02503 E2863_02392 EC95NR1_00961 ED648_25045 EFV01_02465 EFV04_09725 EOL36_23890 ERS085379_01273 ERS085386_05041 HMPREF3040_01583 HW43_13705 NCTC10082_04431 NCTC10418_03071 NCTC10767_03558 NCTC11022_01867 NCTC11126_04427 NCTC11181_05650 NCTC12950_02263 NCTC13462_05714 NCTC8985_00529 NCTC9111_05933 NCTC9112_02079 NCTC9703_00277 PU06_24500 SAMEA3472043_00447 SAMEA3472055_03589 SAMEA3472056_01268 SAMEA3472070_00654 SAMEA3472080_04213 SAMEA3472090_03376 SAMEA3472110_00060 SAMEA3472112_00448 SAMEA3752372_00752 UN91_23615 WQ89_10695] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
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[MT-CO1 COI COXI MTCO1] Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
[mt:CoI CoI] Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
[COX4 YGL187C G1362] Cytochrome c oxidase subunit 4, mitochondrial (EC 1.9.3.1) (Cytochrome c oxidase polypeptide IV)
[cydA cyd-1 b0733 JW0722] Cytochrome bd-I ubiquinol oxidase subunit 1 (EC 7.1.1.7) (Cytochrome bd-I oxidase subunit I) (Cytochrome d ubiquinol oxidase subunit I)
[dim-5 29E8.110 NCU04402] Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5 (EC 2.1.1.43) (Histone H3-K9 methyltransferase dim-5) (H3-K9-HMTase dim-5) (HKMT)
[aro-1 aro-2 aro-4 aro-5 aro-9 B14H13.20 NCU016321] Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
[ccoN1] Cbb3-type cytochrome c oxidase subunit CcoN1 (EC 1.9.3.1) (Cytochrome CBB3 subunit CcoN1)
[MT-CYB COB CYTB MTCYB] Cytochrome b (Complex III subunit 3) (Complex III subunit III) (Cytochrome b-c1 complex subunit 3) (Ubiquinol-cytochrome-c reductase complex cytochrome b subunit)
[cox-2 cox2 oxi1 NCM018 NCU16028] Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
[cydB cyd-2 b0734 JW0723] Cytochrome bd-I ubiquinol oxidase subunit 2 (EC 7.1.1.7) (Cytochrome bd-I oxidase subunit II) (Cytochrome d ubiquinol oxidase subunit II)
[hmpA hmp A8C65_03855 A9R57_17040 ACN002_2592 ACN77_09545 ACN81_26320 ACU57_10360 ACU90_01485 AM270_07210 AM464_04560 AML07_10430 APZ14_05505 AUQ13_13215 AUS26_21665 AW106_11070 AWF80_015090 BANRA_01097 BANRA_03418 BANRA_04525 BB545_05760 BHS81_15570 BHS87_14445 BJJ90_06510 BK292_20760 BMT53_22940 BMT91_09730 BN17_18391 BUE81_08005 BVL39_14050 BW690_11150 BZL31_13550 C2U48_21325 C4J69_10505 C5N07_10115 C5P01_05560 C5P43_25010 C6986_16510 C7235_06805 C9E25_16695 CG691_06165 CG705_05290 CG706_03875 COD30_01045 COD46_11500 CRM83_27495 CWS33_10010 D2184_18725 D2185_06690 D3821_11445 D3O91_03570 D3Y67_23905 D9E22_02790 D9F57_20505 D9H68_00985 D9I18_09865 D9I97_07905 D9J11_04290 D9J44_00060 DIV22_11300 DL545_07245 DL800_19195 DMZ31_01715 DNQ41_17925 DP277_03620 DTL43_01910 E2855_03303 E2863_03210 EAI42_06330 EAI44_09410 EC1094V2_1116 EC3234A_44c01590 EC95NR1_01777 ECTO6_01279 ED600_07770 EEP23_02350 EFV01_13935 EFV02_11870 EFV04_05815 EFV08_03440 EFV11_08940 EFV12_11800 EFV15_03135 ERS085365_01518 ERS085374_00038 ERS085416_03760 ERS139211_00868 ERS150873_01392 ERS150876_00857 FORC28_1400 HW43_17160 NCTC11022_02631 NCTC11181_03552 NCTC13148_02382 NCTC8500_01411 NCTC8960_04037 NCTC8985_06124 NCTC9036_01390 NCTC9037_01459 NCTC9058_00631 NCTC9062_01812 NCTC9073_04581 NCTC9706_04593 NCTC9962_00729 PU06_05410 RG28_09110 RK56_022045 SAMEA3446340_03873 SAMEA3472043_01058 SAMEA3472044_03009 SAMEA3472070_00042 SAMEA3472080_01630 SAMEA3484427_00463 SAMEA3484429_00572 SAMEA3752553_02327 SAMEA3752557_00946 SAMEA3753097_02775 SK85_02808 WQ89_05840] Flavohemoprotein (Flavohemoglobin) (Hemoglobin-like protein) (Nitric oxide dioxygenase) (NO oxygenase) (NOD) (EC 1.14.12.17)
[CYP79F1 BUS1 SPS1 At1g16410 F3O9.21] Dihomomethionine N-hydroxylase (EC 1.14.14.42) (Cytochrome P450 79F1) (Protein BUSHY 1) (Protein SUPERSHOOT 1) (Trihomomethionine N-hydroxylase)
[Or22a AN11 DOR22A.1 dor53 Or22A.1 CG12193] Odorant receptor 22a
[cyt-1 NCU09816] Cytochrome c1, heme protein, mitochondrial (Complex III subunit 4) (Complex III subunit IV) (Cytochrome b-c1 complex subunit 4) (Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit) (Cytochrome c-1)
[pep NCU02549] Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (Ubiquinol-cytochrome-c reductase complex core protein I)
[COX12 YLR038C] Cytochrome c oxidase subunit 6B (EC 1.9.3.1) (Cytochrome c oxidase polypeptide VIb)
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[1a] Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO) (SARS coronavirus main proteinase); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
[RIP1 YEL024W] Cytochrome b-c1 complex subunit Rieske, mitochondrial (EC 7.1.1.8) (Complex III subunit 5) (Rieske iron-sulfur protein) (RISP) (Ubiquinol-cytochrome c reductase iron-sulfur subunit)
[AI4 ENS2 I-SCEII Q0065] Intron-encoded DNA endonuclease aI4 (DNA endonuclease I-SceII) [Cleaved into: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
[1a] Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) (Leader protein); Non-structural protein 2 (nsp2) (p65 homolog); Non-structural protein 3 (nsp3) (EC 3.4.19.12) (EC 3.4.22.69) (PL2-PRO) (Papain-like proteinase) (PL-PRO); Non-structural protein 4 (nsp4); 3C-like proteinase (3CL-PRO) (3CLp) (EC 3.4.22.-) (nsp5); Non-structural protein 6 (nsp6); Non-structural protein 7 (nsp7); Non-structural protein 8 (nsp8); Non-structural protein 9 (nsp9); Non-structural protein 10 (nsp10) (Growth factor-like peptide) (GFL); Non-structural protein 11 (nsp11)]
[] Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM (Precursor membrane protein); Peptide pr (Peptide precursor); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
[COX1 OXI3 Q0045] Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
[appC cbdA cyxA b0978 JW0960] Cytochrome bd-II ubiquinol oxidase subunit 1 (EC 7.1.1.3) (Cytochrome bd-II oxidase subunit I)
[al-3 B8P8.010 NCU01427] Geranylgeranyl pyrophosphate synthase (GGPP synthase) (GGPPSase) (EC 2.5.1.-) ((2E,6E)-farnesyl diphosphate synthase) (Albino-3 protein) (Dimethylallyltranstransferase) (EC 2.5.1.1) (Farnesyl diphosphate synthase) (Farnesyltranstransferase) (EC 2.5.1.29) (Geranylgeranyl diphosphate synthase) (Geranyltranstransferase) (EC 2.5.1.10)

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