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DNA-binding response regulator (Putative response regulator)

 Q1M2T8_ECOLX            Unreviewed;       239 AA.
Q1M2T8;
30-MAY-2006, integrated into UniProtKB/TrEMBL.
30-MAY-2006, sequence version 1.
05-DEC-2018, entry version 81.
SubName: Full=DNA-binding response regulator {ECO:0000313|EMBL:PIM26271.1};
SubName: Full=Putative response regulator {ECO:0000313|EMBL:CAK02710.1};
ORFNames=CT143_24075 {ECO:0000313|EMBL:PIM26271.1};
Escherichia coli.
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
NCBI_TaxID=562 {ECO:0000313|EMBL:CAK02710.1};
[1] {ECO:0000313|EMBL:CAK02710.1}
NUCLEOTIDE SEQUENCE.
PubMed=17064280; DOI=10.1111/j.1574-695X.2006.00140.x;
Sheshko V., Hejnova J., Rehakova Z., Sinkora J., Faldyna M., Alexa P.,
Felsberg J., Nemcova R., Bomba A., Sebo P.;
"HlyA knock out yields a safer Escherichia coli A0 34/86 variant with
unaffected colonization capacity in piglets.";
FEMS Immunol. Med. Microbiol. 48:257-266(2006).
[2] {ECO:0000313|EMBL:PIM26271.1, ECO:0000313|Proteomes:UP000231393}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ABU 84 {ECO:0000313|EMBL:PIM26271.1,
ECO:0000313|Proteomes:UP000231393};
Stork C., Kovacs B., Trost E., Kovacs T., Schneider G., Rozsai B.,
Kerenyi M., Emody L., Dobrindt U.;
"Whole-genome draft sequences of nine asymptomatic Escherichia coli
bacteriuria isolates from diabetic patients.";
Submitted (NOV-2017) to the EMBL/GenBank/DDBJ databases.
-----------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution (CC BY 4.0) License
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EMBL; AM261284; CAK02710.1; -; Genomic_DNA.
EMBL; PENR01000021; PIM26271.1; -; Genomic_DNA.
RefSeq; WP_001528406.1; NZ_UARZ01000005.1.
ProteinModelPortal; Q1M2T8; -.
PATRIC; fig|562.10500.peg.709; -.
eggNOG; ENOG4105CK6; Bacteria.
eggNOG; COG0745; LUCA.
Proteomes; UP000231393; Unassembled WGS sequence.
GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
GO; GO:0000160; P:phosphorelay signal transduction system; IEA:UniProtKB-KW.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
CDD; cd00156; REC; 1.
CDD; cd00383; trans_reg_C; 1.
Gene3D; 1.10.10.10; -; 1.
InterPro; IPR011006; CheY-like_superfamily.
InterPro; IPR001867; OmpR/PhoB-type_DNA-bd.
InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
InterPro; IPR039420; WalR-like.
InterPro; IPR036388; WH-like_DNA-bd_sf.
PANTHER; PTHR26402; PTHR26402; 1.
Pfam; PF00072; Response_reg; 1.
Pfam; PF00486; Trans_reg_C; 1.
SMART; SM00448; REC; 1.
SMART; SM00862; Trans_reg_C; 1.
SUPFAM; SSF46894; SSF46894; 1.
SUPFAM; SSF52172; SSF52172; 1.
PROSITE; PS51755; OMPR_PHOB; 1.
PROSITE; PS50110; RESPONSE_REGULATORY; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000231393};
DNA-binding {ECO:0000256|PROSITE-ProRule:PRU01091,
ECO:0000256|SAAS:SAAS00529408, ECO:0000313|EMBL:PIM26271.1};
Phosphoprotein {ECO:0000256|PROSITE-ProRule:PRU00169};
Transcription {ECO:0000256|SAAS:SAAS01076456};
Transcription regulation {ECO:0000256|SAAS:SAAS01076456};
Two-component regulatory system {ECO:0000256|SAAS:SAAS01100377}.
DOMAIN 6 120 Response regulatory.
{ECO:0000259|PROSITE:PS50110}.
DOMAIN 134 233 OmpR/PhoB-type.
{ECO:0000259|PROSITE:PS51755}.
DNA_BIND 134 233 OmpR/PhoB-type. {ECO:0000256|PROSITE-
ProRule:PRU01091}.
MOD_RES 55 55 4-aspartylphosphate.
{ECO:0000256|PROSITE-ProRule:PRU00169}.
SEQUENCE 239 AA; 27632 MW; CE36D9CCCA4F2DBC CRC64;
MNNVKKILLM EDDYDIAALL RLNLQDEGYQ IVHEADGARA RLLLDKQTWD AVILDLMLPN
VNGLEICRYI RQMTRYLPVI IISARTSETH RVLGLEMGAD DYLPKPFSIP ELIARIKALF
RRQEAMGQNI LLAGRLICCH GLCINPFSRE VHLHNKQVDL TPREFDLLLW FARHPGEVFS
RLSLLDNVWG YQHEGYEHTV NTHINRLRAK IEQDAAEPKM IQTVWGKGYR FSVDNAGMR


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Pathways :
WP1689: Porphyrin and chlorophyll metabolism
WP1040: Inflammatory Response Pathway
WP1113: Cytokines and Inflammatory Response
WP1156: Inflammatory Response Pathway
WP1527: stress response
WP1530: miRNA regulation of DNA Damage Response
WP1579: DNA damage response
WP1903: Response to elevated platelet cytosolic Ca2+
WP1939: Unfolded Protein Response
WP2087: miRNA regulation of DNA Damage Response
WP2152: BDNF
WP222: Cytokines and Inflammatory Response (BioCarta)
WP271: Cytokines and Inflammatory Response (BioCarta)
WP40: Inflammatory Response Pathway
WP453: Inflammatory Response Pathway
WP458: Inflammatory Response Pathway
WP525: Mitochondrial Unfolded-Protein Response
WP530: Cytokines and Inflammatory Response
WP707: DNA damage response
WP710: DNA damage response (only ATM dependent)
WP879: Cytokines and Inflammatory Response (BioCarta)
WP920: Inflammatory Response Pathway
WP997: Cytokines and Inflammatory Response (BioCarta)
WP1531: Vitamin D synthesis
WP1581: Histidine metabolism

Related Genes :
[ARR4 ATRR1 IBC7 At1g10470 T10O24.8] Two-component response regulator ARR4 (Response regulator 1)
[RCF3 ESR1 HOS5 SHI1 At5g53060 MNB8.12] RNA-binding KH domain-containing protein RCF3 (Protein ENHANCED STRESS RESPONSE 1) (Protein HIGH OSMOTIC STRESS GENE EXPRESSION 5) (Protein REGULATOR OF CBF GENE EXPRESSION 3) (Protein SHINY 1)
[APRR7 At5g02810 F9G14_120] Two-component response regulator-like APRR7 (Pseudo-response regulator 7)
[chxR CTL0894] Atypical response regulator protein ChxR (Transcriptional regulatory protein)
[dosT Rv2027c] Oxygen sensor histidine kinase response regulator DosT (EC 2.7.13.3)
[pleD CCNA_02546] Response regulator PleD (Stalked cell differentiation-controlling protein) [Includes: Diguanylate cyclase (DGC) (EC 2.7.7.65) (Diguanylate kinase)]
[devS dosS Rv3132c] Oxygen sensor histidine kinase response regulator DevS/DosS (EC 2.7.13.3)
[CFTR ABCC7] Cystic fibrosis transmembrane conductance regulator (CFTR) (ATP-binding cassette sub-family C member 7) (Channel conductance-controlling ATPase) (EC 3.6.3.49) (cAMP-dependent chloride channel)
[APRR9 At2g46790 F19D11.7] Two-component response regulator-like APRR9 (Pseudo-response regulator 9)
[TCIM C8orf4 TC1] Transcriptional and immune response regulator (Thyroid cancer protein 1) (TC-1)
[ada b2213 JW2201] Bifunctional transcriptional activator/DNA repair enzyme Ada (Regulatory protein of adaptive response) [Includes: Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) (Methylphosphotriester-DNA methyltransferase); Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (O6-methylguanine-DNA alkyltransferase)]
[regA pde2 DDB_G0284331] 3',5'-cyclic-nucleotide phosphodiesterase regA (PDEase regA) (EC 3.1.4.53) (Phosphodiesterase 2) (DdPDE2) (Response regulator protein A) (cAMP-specific 3',5'-cAMP phosphodiesterase 2)
[ETR1 At1g66340 T27F4.9] Ethylene receptor 1 (AtETR1) (EC 2.7.13.3) (Protein ETHYLENE RESPONSE 1) (Protein ETR1)
[SSK1 CAALFM_C113930WA CaO19.12498 CaO19.5031] Oxidative stress response two-component system protein SSK1
[atoC az b2220 JW2214] Regulatory protein AtoC (Acetoacetate metabolism regulatory protein) (DNA-binding transcriptional regulator AtoC) (Ornithine decarboxylase antizyme)
[Tcf12] Transcription factor 12 (TCF-12) (DNA-binding protein HTF4) (E-box-binding protein) (Salivary-specific cAMP response element-binding protein alpha) (SCBP-alpha) (Transcription factor HTF-4)
[cheB b1883 JW1872] Protein-glutamate methylesterase/protein-glutamine glutaminase (EC 3.1.1.61) (EC 3.5.1.44) (Chemotaxis response regulator protein-glutamate methylesterase/glutamine deamidase) (Methyl-accepting chemotaxis proteins-specific methylesterase/deamidase) (MCP-specific methylesterase/deamidase)
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[Pawr Par4] PRKC apoptosis WT1 regulator protein (Prostate apoptosis response 4 protein) (Par-4) (Transcriptional repressor Par-4-like protein PAWR)
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[ATRX RAD54L XH2] Transcriptional regulator ATRX (EC 3.6.4.12) (ATP-dependent helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX)
[ramR SCO6685] Response regulator RamR (Transcriptional activator RamR)
[RIM101 HRM101 PRR2 CAALFM_C114340CA CaO19.7247] pH-response transcription factor pacC/RIM101 (pH-response regulator protein 2)
[ZFP36L2 BRF2 ERF2 RNF162C TIS11D] mRNA decay activator protein ZFP36L2 (Butyrate response factor 2) (EGF-response factor 2) (ERF-2) (TPA-induced sequence 11d) (Zinc finger protein 36, C3H1 type-like 2) (ZFP36-like 2)
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[Cflar Cash] CASP8 and FADD-like apoptosis regulator (Caspase homolog) (CASH) (Caspase-eight-related protein) (Casper) (Caspase-like apoptosis regulatory protein) (CLARP) (Cellular FLICE-like inhibitory protein) (c-FLIP) (FADD-like antiapoptotic molecule 1) (FLAME-1) (Inhibitor of FLICE) (I-FLICE) (MACH-related inducer of toxicity) (MRIT) (Usurpin) [Cleaved into: CASP8 and FADD-like apoptosis regulator subunit p43; CASP8 and FADD-like apoptosis regulator subunit p12]
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[ARF7 BIP IAA21 IAA23 IAA25 NPH4 TIR5 At5g20730 T1M15.130] Auxin response factor 7 (Auxin-responsive protein IAA21/IAA23/IAA25) (Protein BIPOSTO) (Protein NON-PHOTOTROPIC HYPOCOTYL 4) (Protein TRANSPORT INHIBITOR RESPONSE 5)
[csrA zfiA b2696 JW2666] Carbon storage regulator (Translational dual regulator CsrA)

Bibliography :
[30201779] Regulatory Targets of the Response Regulator RR_1586 from Clostridioides difficile Identified Using a Bacterial One-Hybrid Screen.
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[29269393] Structural basis for the regulation of β-glucuronidase expression by human gut Enterobacteriaceae.
[29247062] CerR, a Single-Domain Regulatory Protein of the LuxR Family, Promotes Cerecidin Production and Immunity in Bacillus cereus.
[28667437] An Elf2-like transcription factor acts as repressor of the mouse ecto-5'-nucleotidase gene expression in hepatic myofibroblasts.
[28538660] Regulatory Plasticity of Earthworm wMT-2 Gene Expression.
[28342076] Schizosaccharomyces pombe rsv1 Transcription Factor and its Putative Homologues Preserved their Functional Homology and are Evolutionarily Conserved.
[28289082] Use of a Phosphorylation Site Mutant To Identify Distinct Modes of Gene Repression by the Control of Virulence Regulator (CovR) in Streptococcus pyogenes.
[28242664] The Two-Component System ChtRS Contributes to Chlorhexidine Tolerance in Enterococcus faecium.
[28009300] Lineage-Specific and Non-specific Cytokine-Sensing Genes Respond Differentially to the Master Regulator STAT5.
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