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G protein-coupled receptor 50 (Melatonin-related receptor)

 G3V7H9_RAT              Unreviewed;       594 AA.
G3V7H9;
16-NOV-2011, integrated into UniProtKB/TrEMBL.
16-NOV-2011, sequence version 1.
26-FEB-2020, entry version 56.
SubName: Full=G protein-coupled receptor 50 {ECO:0000313|EMBL:EDL82824.1};
SubName: Full=Melatonin-related receptor {ECO:0000313|Ensembl:ENSRNOP00000015147};
Name=Gpr50 {ECO:0000313|EMBL:EDL82824.1,
ECO:0000313|Ensembl:ENSRNOP00000015147, ECO:0000313|RGD:619863};
ORFNames=rCG_56789 {ECO:0000313|EMBL:EDL82824.1};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|Ensembl:ENSRNOP00000015147, ECO:0000313|Proteomes:UP000002494};
[1] {ECO:0000313|Ensembl:ENSRNOP00000015147, ECO:0000313|Proteomes:UP000002494}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000015147,
ECO:0000313|Proteomes:UP000002494};
PubMed=15057822; DOI=10.1038/nature02426;
Rat Genome Sequencing Project Consortium;
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D.,
Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L.,
Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D.,
Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M.,
Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C.,
Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J.,
Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H.,
Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X.,
Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q.,
Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P.,
Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A.,
Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C.,
Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J.,
Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F.,
Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A.,
Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A.,
Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J.,
Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E.,
Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C.,
Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L.,
Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W.,
Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y.,
Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V.,
Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M.,
Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S.,
Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B.,
Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R.,
Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J.,
Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D.,
Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S.,
Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S.,
Mockrin S., Collins F.S.;
"Genome sequence of the Brown Norway rat yields insights into mammalian
evolution.";
Nature 428:493-521(2004).
[2] {ECO:0000313|EMBL:EDL82824.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDL82824.1};
PubMed=15632090; DOI=10.1101/gr.2889405;
Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M.,
Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z.,
Istrail S., Li P., Sutton G.;
"Gene and alternative splicing annotation with AIR.";
Genome Res. 15:54-66(2005).
[3] {ECO:0000313|EMBL:EDL82824.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BN {ECO:0000313|EMBL:EDL82824.1};
Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H.,
Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M.,
Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F.,
Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G.,
Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|Ensembl:ENSRNOP00000015147}
IDENTIFICATION.
STRAIN=Brown Norway {ECO:0000313|Ensembl:ENSRNOP00000015147};
Ensembl;
Submitted (SEP-2011) to UniProtKB.
-!- SIMILARITY: Belongs to the G-protein coupled receptor 1 family.
{ECO:0000256|RuleBase:RU000688}.
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EMBL; AABR07027558; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CH474187; EDL82824.1; -; Genomic_DNA.
RefSeq; NP_001178844.1; NM_001191915.1.
Ensembl; ENSRNOT00000015147; ENSRNOP00000015147; ENSRNOG00000011335.
GeneID; 117097; -.
KEGG; rno:117097; -.
CTD; 9248; -.
RGD; 619863; Gpr50.
eggNOG; ENOG410IHFY; Eukaryota.
eggNOG; ENOG4111ZZV; LUCA.
GeneTree; ENSGT00940000160515; -.
HOGENOM; CLU_468199_0_0_1; -.
KO; K04287; -.
OMA; VGFCYMR; -.
OrthoDB; 907115at2759; -.
TreeFam; TF331693; -.
Proteomes; UP000002494; Chromosome 17.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
GO; GO:0008502; F:melatonin receptor activity; IEA:InterPro.
InterPro; IPR000276; GPCR_Rhodpsn.
InterPro; IPR017452; GPCR_Rhodpsn_7TM.
InterPro; IPR002280; Mel_rcpt_1X.
InterPro; IPR000025; Melatonin_rcpt.
PANTHER; PTHR24228:SF56; PTHR24228:SF56; 1.
Pfam; PF00001; 7tm_1; 1.
PRINTS; PR00237; GPCRRHODOPSN.
PRINTS; PR01151; MELATONIN1XR.
PRINTS; PR00857; MELATONINR.
SMART; SM01381; 7TM_GPCR_Srsx; 1.
PROSITE; PS00237; G_PROTEIN_RECEP_F1_1; 1.
PROSITE; PS50262; G_PROTEIN_RECEP_F1_2; 1.
3: Inferred from homology;
G-protein coupled receptor {ECO:0000256|RuleBase:RU000688};
Membrane {ECO:0000256|SAM:Phobius};
Receptor {ECO:0000256|RuleBase:RU000688};
Reference proteome {ECO:0000313|Proteomes:UP000002494};
Transducer {ECO:0000256|RuleBase:RU000688};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 35..61
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 73..91
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 111..132
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 153..174
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 194..217
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 244..270
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
TRANSMEM 282..305
/note="Helical"
/evidence="ECO:0000256|SAM:Phobius"
DOMAIN 53..302
/note="G_PROTEIN_RECEP_F1_2"
/evidence="ECO:0000259|PROSITE:PS50262"
REGION 384..428
/note="Disordered"
/evidence="ECO:0000256|SAM:MobiDB-lite"
COMPBIAS 390..407
/note="Polar"
/evidence="ECO:0000256|SAM:MobiDB-lite"
SEQUENCE 594 AA; 65418 MW; F0E66C6F50B44FCC CRC64;
MATVPKSNMG PTKAIPTPFG CISCKLPKPD YPPALIIFVF CAMVITVVVD LIGNSMVILA
VTKNKKLRNS GNIFVASLSV ADMLVAIYPY PLMLYTMSVG GWDLSQLQCQ MVGLVTGLSV
VGSIFNITAI AINRYCYICH SLQYKRIFSL RNTCIYLVVT WVMTVLAVLP NVYIGTIEYD
PRTYTCIFNY VNNPAFTVTI VCIHFVLPLI IVGYCYTKIW IKVLAARDPA GQNPDNQFAE
VRNFLTMFVI FLLFAVCWCP VNVLTVLVAV IPKEMAGKIP NWLYLAAYCI AYFNSCLNAI
IYGILNESFR REYWTIFHAM RHPILFISHL ISAIREAWET RVLTRARVRA RDQVREQDRA
RACVAVAGTP RNVRNVLLPG DAAASPSDRA SVRPKSQTRS TSVYRKPASI HHKSISGHPK
SASVYPRPAS SVHCKPASVH FKPTSVHFKG DSVYFKGDTV HFRAASKLVT SHRISAGPST
SHPTSMAGYI KSGTSHRATT TVDYLEPATT SHSVLTAVDL PEVSASHCLE MTTFGHLKPD
IPASILPTVP PELAVTSATP PDATVIPIPT GDYRKVVLID DDSDDSDCSD EMAV


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[Kiss1r Gpr54] KiSS-1 receptor (KiSS-1R) (G-protein coupled receptor 54) (G-protein coupled receptor OT7T175) (mOT7T175) (Kisspeptins receptor) (Metastin receptor)
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Bibliography :
[20733416] Evaluation of GPR50, hMel-1B, and ROR-alpha melatonin-related receptors and the etiology of adolescent idiopathic scoliosis.
[20377855] Mutation screening of melatonin-related genes in patients with autism spectrum disorders.