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Germacradienol/geosmin synthase [Includes: Germacradienol/germacrene D synthase (EC 4.2.3.22) (EC 4.2.3.75) (Sesquiterpene cyclase) (Sesquiterpene synthase); Geosmin synthase (EC 4.1.99.16)]

 CYC2_STRCO              Reviewed;         726 AA.
Q9X839;
25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 3.
16-JAN-2019, entry version 107.
RecName: Full=Germacradienol/geosmin synthase;
Includes:
RecName: Full=Germacradienol/germacrene D synthase;
EC=4.2.3.22;
EC=4.2.3.75;
AltName: Full=Sesquiterpene cyclase;
AltName: Full=Sesquiterpene synthase;
Includes:
RecName: Full=Geosmin synthase;
EC=4.1.99.16;
Name=cyc2; OrderedLocusNames=SCO6073; ORFNames=SC9B1.20;
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
Streptomyces; Streptomyces albidoflavus group.
NCBI_TaxID=100226;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=12000953; DOI=10.1038/417141a;
Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L.,
Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H.,
Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M.,
Cronin A., Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S.,
Huang C.-H., Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S.,
Rabbinowitsch E., Rajandream M.A., Rutherford K.M., Rutter S.,
Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K.,
Warren T., Wietzorrek A., Woodward J.R., Barrell B.G., Parkhill J.,
Hopwood D.A.;
"Complete genome sequence of the model actinomycete Streptomyces
coelicolor A3(2).";
Nature 417:141-147(2002).
[2]
PROTEIN SEQUENCE OF 2-10, FUNCTION, CATALYTIC ACTIVITY, DOMAIN,
KINETIC PARAMETERS, AND COFACTOR.
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=12556563; DOI=10.1073/pnas.0337625100;
Cane D.E., Watt R.M.;
"Expression and mechanistic analysis of a germacradienol synthase from
Streptomyces coelicolor implicated in geosmin biosynthesis.";
Proc. Natl. Acad. Sci. U.S.A. 100:1547-1551(2003).
[3]
DOMAIN, AND ROLE IN GEOSMIN BIOSYNTHESIS.
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=12563033; DOI=10.1073/pnas.0337542100;
Gust B., Challis G.L., Fowler K., Kieser T., Chater K.F.;
"PCR-targeted Streptomyces gene replacement identifies a protein
domain needed for biosynthesis of the sesquiterpene soil odor
geosmin.";
Proc. Natl. Acad. Sci. U.S.A. 100:1541-1546(2003).
[4]
FUNCTION IN GERMACRENE D PRODUCTION, AND REACTION STEREOCHEMISTRY.
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=14995166; DOI=10.1021/ja039929k;
He X., Cane D.E.;
"Mechanism and stereochemistry of the germacradienol/germacrene D
synthase of Streptomyces coelicolor A3(2).";
J. Am. Chem. Soc. 126:2678-2679(2004).
[5]
FUNCTION IN DIRECT GEOSMIN PRODUCTION, COFACTOR, AND REACTION
MECHANISM.
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=16787064; DOI=10.1021/ja062669x;
Jiang J., He X., Cane D.E.;
"Geosmin biosynthesis. Streptomyces coelicolor
germacradienol/germacrene D synthase converts farnesyl diphosphate to
geosmin.";
J. Am. Chem. Soc. 128:8128-8129(2006).
-!- FUNCTION: Tow-domain protein where the N-terminal domain catalyzes
the cyclization of farnesyl diphosphate (FPP) to a 85:15 mixture
of the sesquiterpene alcohol germacradienol and the sesquiterpene
hydrocarbon germacrene D. The C-terminal domain partially converts
the germacradienol formed into geosmin, the characteristic
odoriferous ('earthy aroma') constituent of Streptomyces species.
{ECO:0000269|PubMed:12556563, ECO:0000269|PubMed:12563033,
ECO:0000269|PubMed:14995166, ECO:0000269|PubMed:16787064}.
-!- CATALYTIC ACTIVITY:
Reaction=(2E,6E)-farnesyl diphosphate + H2O = (1E,4S,5E,7R)-
germacra-1(10),5-dien-11-ol + diphosphate; Xref=Rhea:RHEA:22436,
ChEBI:CHEBI:15377, ChEBI:CHEBI:33019, ChEBI:CHEBI:46734,
ChEBI:CHEBI:175763; EC=4.2.3.22;
Evidence={ECO:0000269|PubMed:12556563};
-!- CATALYTIC ACTIVITY:
Reaction=(1E,4S,5E,7R)-germacra-1(10),5-dien-11-ol + H2O = (-)-
geosmin + acetone; Xref=Rhea:RHEA:30371, ChEBI:CHEBI:15347,
ChEBI:CHEBI:15377, ChEBI:CHEBI:46702, ChEBI:CHEBI:46734;
EC=4.1.99.16; Evidence={ECO:0000269|PubMed:12556563};
-!- CATALYTIC ACTIVITY:
Reaction=(2E,6E)-farnesyl diphosphate = (-)-germacrene D +
diphosphate; Xref=Rhea:RHEA:12016, ChEBI:CHEBI:33019,
ChEBI:CHEBI:49044, ChEBI:CHEBI:175763; EC=4.2.3.75;
Evidence={ECO:0000269|PubMed:12556563};
-!- COFACTOR:
Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
Evidence={ECO:0000269|PubMed:12556563,
ECO:0000269|PubMed:16787064};
Note=Magnesium. Fe(2+) or Cu(2+) ions are very less efficient as
cofactors. {ECO:0000269|PubMed:12556563,
ECO:0000269|PubMed:16787064};
-!- BIOPHYSICOCHEMICAL PROPERTIES:
Kinetic parameters:
KM=62 nM for FPP {ECO:0000269|PubMed:12556563};
-!- PATHWAY: Secondary metabolite biosynthesis; geosmin biosynthesis.
-!- PATHWAY: Sesquiterpene biosynthesis; germacradienol biosynthesis;
germacradienol from farnesyl diphosphate: step 1/1.
-!- PATHWAY: Sesquiterpene biosynthesis; germacrene D biosynthesis;
germacrene D from farnesyl diphosphate: step 1/1.
-!- DOMAIN: Consists of 2 homologous sesquiterpene synthase domains.
The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the
catalytic activity, presumably through binding to Mg(2+).
{ECO:0000269|PubMed:12556563, ECO:0000269|PubMed:12563033}.
-!- MISCELLANEOUS: The earthy odorant geosmin is also responsible for
the 'off-flavor' of contaminated drinking water, wines, and other
foodstuffs.
-!- SIMILARITY: Belongs to the terpene synthase family. {ECO:0000305}.
-!- CAUTION: It is uncertain whether the initial Met is cleaved or
not. {ECO:0000305}.
-!- WEB RESOURCE: Name=Protein Spotlight; Note=The earth's perfume
- Issue 35 of June 2003;
URL="https://web.expasy.org/spotlight/back_issues/035";
-----------------------------------------------------------------------
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EMBL; AL939126; CAB41566.1; -; Genomic_DNA.
PIR; T35865; T35865.
RefSeq; NP_630182.1; NC_003888.3.
RefSeq; WP_011030632.1; NC_003888.3.
PDB; 5DW7; X-ray; 3.20 A; A=1-366.
PDB; 5DZ2; X-ray; 2.11 A; A/B=1-338.
PDBsum; 5DW7; -.
PDBsum; 5DZ2; -.
ProteinModelPortal; Q9X839; -.
SMR; Q9X839; -.
STRING; 100226.SCO6073; -.
PRIDE; Q9X839; -.
EnsemblBacteria; CAB41566; CAB41566; CAB41566.
GeneID; 1101514; -.
KEGG; sco:SCO6073; -.
PATRIC; fig|100226.15.peg.6175; -.
eggNOG; ENOG4105IK6; Bacteria.
eggNOG; ENOG410XSNU; LUCA.
HOGENOM; HOG000253477; -.
InParanoid; Q9X839; -.
KO; K10187; -.
OMA; RLPLFMP; -.
BioCyc; MetaCyc:MONOMER-14022; -.
BRENDA; 4.1.99.16; 5998.
BRENDA; 4.2.3.22; 5998.
SABIO-RK; Q9X839; -.
UniPathway; UPA00209; -.
UniPathway; UPA00283; UER00583.
UniPathway; UPA00285; UER00584.
Proteomes; UP000001973; Chromosome.
GO; GO:0034004; F:germacradienol synthase activity; IEA:UniProtKB-EC.
GO; GO:0052577; F:germacrene-D synthase activity; IEA:UniProtKB-EC.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
Gene3D; 1.10.600.10; -; 2.
InterPro; IPR008949; Isoprenoid_synthase_dom_sf.
InterPro; IPR034686; Terpene_cyclase_like_2.
SFLD; SFLDG01020; Terpene_Cyclase_Like_2; 2.
SUPFAM; SSF48576; SSF48576; 2.
1: Evidence at protein level;
3D-structure; Complete proteome; Direct protein sequencing; Lyase;
Magnesium; Metal-binding; Reference proteome; Repeat.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:12556563}.
CHAIN 2 726 Germacradienol/geosmin synthase.
/FTId=PRO_0000247895.
REGION 2 354 Germacradienol/germacrene D synthase.
REGION 355 726 Geosmin synthase.
MOTIF 86 91 DDXXD motif 1; degenerate.
MOTIF 455 459 DDXXD motif 2; degenerate.
METAL 86 86 Magnesium. {ECO:0000255}.
METAL 91 91 Magnesium. {ECO:0000255}.
METAL 267 267 Magnesium. {ECO:0000255}.
METAL 271 271 Magnesium. {ECO:0000255}.
METAL 276 276 Magnesium. {ECO:0000255}.
METAL 455 455 Magnesium. {ECO:0000255}.
METAL 598 598 Magnesium. {ECO:0000255}.
METAL 602 602 Magnesium. {ECO:0000255}.
METAL 606 606 Magnesium. {ECO:0000255}.
HELIX 23 37 {ECO:0000244|PDB:5DZ2}.
STRAND 43 45 {ECO:0000244|PDB:5DZ2}.
HELIX 48 54 {ECO:0000244|PDB:5DZ2}.
HELIX 56 63 {ECO:0000244|PDB:5DZ2}.
HELIX 69 92 {ECO:0000244|PDB:5DZ2}.
TURN 93 97 {ECO:0000244|PDB:5DZ2}.
HELIX 99 108 {ECO:0000244|PDB:5DZ2}.
HELIX 109 112 {ECO:0000244|PDB:5DZ2}.
HELIX 127 139 {ECO:0000244|PDB:5DZ2}.
HELIX 140 142 {ECO:0000244|PDB:5DZ2}.
HELIX 145 171 {ECO:0000244|PDB:5DZ2}.
HELIX 177 187 {ECO:0000244|PDB:5DZ2}.
HELIX 190 200 {ECO:0000244|PDB:5DZ2}.
HELIX 206 209 {ECO:0000244|PDB:5DZ2}.
HELIX 212 239 {ECO:0000244|PDB:5DZ2}.
HELIX 247 255 {ECO:0000244|PDB:5DZ2}.
HELIX 259 282 {ECO:0000244|PDB:5DZ2}.
HELIX 284 291 {ECO:0000244|PDB:5DZ2}.
HELIX 296 320 {ECO:0000244|PDB:5DZ2}.
HELIX 324 326 {ECO:0000244|PDB:5DW7}.
SEQUENCE 726 AA; 81474 MW; CB332AC7840EB81E CRC64;
MTQQPFQLPH FYLPHPARLN PHLDEARAHS TTWAREMGML EGSGVWEQSD LEAHDYGLLC
AYTHPDCDGP ALSLITDWYV WVFFFDDHFL EKYKRSQDRL AGKAHLDRLP LFMPLDDAAG
MPEPRNPVEA GLADLWTRTV PAMSADWRRR FAVATEHLLN ESMWELSNIN EGRVANPVEY
IEMRRKVGGA PWSAGLVEYA TAEVPAAVAG TRPLRVLMET FSDAVHLRND LFSYQREVED
EGELSNGVLV LETFFGCTTQ EAADLVNDVL TSRLHQFEHT AFTEVPAVAL EKGLTPLEVA
AVGAYTKGLQ DWQSGGHEWH MRSSRYMNKG ERPLAGWQAL TGPGTSAADV GALLADAVAQ
RARSYTYVPF QKVGPSVIPD IRMPYPLELS PALDGARRHL SEWCREMGIL SEGVWDEDKL
ESCDLPLCAA GLDPDATQDQ LDLASGWLAF GTYGDDYYPL VYGHRRDLAA ARLTTTRLSD
CMPLDGEPVP PPGNAMERSL IDLWVRTTAG MTPEERRPLK KAVDDMTEAW LWELSNQIQN
RVPDPVDYLE MRRATFGSDL TLGLCRAGHG PAVPPEVYRS GPVRSLENAA IDYACLLNDV
FSYQKEIEYE GEIHNAVLVV QNFFGVDYPA ALGVVQDLMN QRMRQFEHVV AHELPVVYDD
FQLSEEARTV MRGYVTDLQN WMAGILNWHR NVPRYKAEYL AGRTHGFLPD RIPAPPVPRS
SPALTH


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Pathways :
WP668: Octadecanoid Pathway
WP1403: AMPK signaling
WP1422: Sphingolipid Metabolism
WP1423: Ganglio Sphingolipid Metabolism
WP1424: Globo Sphingolipid Metabolism
WP1461: Photosynthetic Carbon Reduction
WP1621: Arginine and proline metabolism
WP1708: Terpenoid backbone biosynthesis
WP2199: Seed Development
WP2208: Cardiolipin Biosynthesis
WP2210: Oryzalexin S biosynthesis
WP2211: Geranylgeranyldiphosphate biosynthesis II (plastidic)
WP2248: anthocyanin biosynthesis
WP2340: Thiamine (vitamin B1) biosynthesis and salvage
WP2341: vitamin B1 (thiamin) biosynthesis and salvage pathway
WP296: TCA Cycle - biocyc
WP626: Abscisic Acid Biosynthesis
WP677: Momilactone biosynthesis
WP1693: Purine metabolism

Related Genes :
[cyc2 SCO6073 SC9B1.20] Germacradienol/geosmin synthase [Includes: Germacradienol/germacrene D synthase (EC 4.2.3.22) (EC 4.2.3.75) (Sesquiterpene cyclase) (Sesquiterpene synthase); Geosmin synthase (EC 4.1.99.16)]
[penA] Pentalenene synthase (PS) (EC 4.2.3.7) (Pentalenolactone biosynthesis protein A) (Sesquiterpene cyclase) (Sesquiterpene synthase)
[pyrG A6592_02570 A8M42_16405 A9R57_06965 AC067_22330 AC789_1c31020 ACN002_2797 ACN77_07080 ACN81_20385 ACU57_24415 ACU90_23015 AJ318_22735 AKG99_03555 AM270_00945 AM446_06950 AM464_05605 AM465_10605 AML07_12460 AML35_05300 APT94_17890 APU18_18535 APZ14_09290 ARC77_10140 AU473_08010 AUQ13_17535 AUS26_15660 AW059_10675 AW106_00665 AWP75_20610 AZZ83_003241 B1K96_20050 B7C53_10055 B9M99_21725 B9N33_09475 B9T59_19685 BB545_13920 BE963_03670 BEN53_16995 BET08_07180 BH694_13410 BHF46_05050 BHS81_16640 BHS87_15735 BIQ87_15835 BIU72_09520 BIZ41_16885 BJJ90_05265 BK248_12970 BK292_23205 BK334_11935 BK373_15870 BK375_10085 BK383_11680 BK400_05820 BMT49_17330 BMT53_21250 BMT91_11105 BN17_26661 BTQ04_11510 BTQ06_23845 BUE81_06975 BVL39_12970 BW690_04975 BWP17_05185 BXT93_24405 BZL31_00820 BZL69_02125 C1I57_04860 C2M16_17770 C2U48_20025 C3K24_08940 C4J69_11655 C4K41_05275 C4M78_00835 C5715_23540 C5N07_06155 C5P01_05005 C5P43_15935 C5P44_09340 C6669_14670 C6986_17750 C6B13_03370 C7235_05745 C7B02_19400 C7B06_11630 C7B07_14530 C7B08_01430 C9E25_03325 CA593_12975 CCZ14_04445 CCZ17_10850 CDL37_13440 CG691_07365 CG692_07005 CG705_05530 CG706_07860 CIJ94_12220 COD30_01795 COD46_07095 CR538_05495 CR539_18815 CRE06_03485 CRM83_26360 CSB64_15850 CT143_09630 CT146_00680 CV83915_03339 CVH05_06295 CWM24_00790 CWS33_03125 CXB56_08765 D0X26_06660 D1900_12730 D2183_19100 D2F89_14380 D3I61_16000 DD762_13665 DIV22_29760 DIV25_29790 DL545_05995 DL800_20505 DNQ41_18960 DNR41_08670 DQE83_04685 DS732_20695 DS966_06010 DTL43_09355 DTL84_00105 DTL90_02675 DTM10_03745 DTM25_22630 DTM27_13675 DTM45_13530 EC1094V2_904 EC3234A_48c00890 EC95NR1_02021 ECONIH1_15890 ECs3640 EL75_0914 EL79_0915 EL80_0918 ERS085365_02427 ERS085366_03042 ERS085374_03279 ERS085386_03410 ERS085416_02898 ERS139211_02072 ERS150873_02003 ERS150876_01467 FORC28_1110 GJ11_18025 HMPREF3040_01161 HW43_18180 JD73_16335 MJ49_17095 MS6198_30910 MS8345_02965 NCTC10082_03473 NCTC10090_04050 NCTC10418_01701 NCTC10764_00296 NCTC10766_00690 NCTC10767_02309 NCTC11022_02860 NCTC11112_00121 NCTC11181_03277 NCTC12950_01251 NCTC13125_04353 NCTC13127_01436 NCTC13462_04807 NCTC13846_01212 NCTC7152_00995 NCTC7927_01209 NCTC8500_01090 NCTC8960_03783 NCTC9007_03892 NCTC9010_01168 NCTC9036_01135 NCTC9037_01243 NCTC9045_01221 NCTC9050_04166 NCTC9058_00847 NCTC9062_02131 NCTC9075_01630 NCTC9077_01409 NCTC9081_05851 NCTC9117_01609 NCTC9119_01271 NCTC9434_01004 NCTC9706_03296 NCTC9775_04845 NCTC9777_02704 NCTC9969_01292 PU06_02080 RG28_07675 RK56_023165 SAMEA3472033_01264 SAMEA3472044_02272 SAMEA3472047_00339 SAMEA3472056_05455 SAMEA3472067_02540 SAMEA3472070_01673 SAMEA3472080_03155 SAMEA3472090_00131 SAMEA3472108_00527 SAMEA3472110_03462 SAMEA3472112_03722 SAMEA3472114_02432 SAMEA3472147_03296 SAMEA3484427_03298 SAMEA3484429_03415 SAMEA3484433_01660 SAMEA3484434_01581 SAMEA3485101_02257 SAMEA3485113_02257 SAMEA3752372_03639 SAMEA3752557_03040 SAMEA3752559_02995 SAMEA3752620_01282 SAMEA3753064_02287 SAMEA3753097_02219 SAMEA3753106_03183 SAMEA3753164_01192 SAMEA3753290_02847 SAMEA3753300_01107 SAMEA3753391_02580 SAMEA3753397_04005 SK85_03024 SY51_15605 UC41_20365 UN91_03645 WM48_14990 WQ89_10170 WR15_06090 YDC107_1339] CTP synthase (EC 6.3.4.2) (Cytidine 5'-triphosphate synthase) (Cytidine triphosphate synthetase) (CTP synthetase) (CTPS) (UTP--ammonia ligase)
[TRI5 TOX 5] Trichodiene synthase (EC 4.2.3.6) (Core trichothecene cluster (CTC) protein 5) (Sesquiterpene cyclase TRI5) (TS)
[TPS1] Acyclic sesquiterpene synthase ((3R,6E)-nerolidol synthase) (EC 4.2.3.49) (Beta-farnesene synthase) (EC 4.2.3.47) (Farnesyl diphosphatase) (EC 3.1.7.6) (Terpene synthase 1)
[BOT2 CND15] Presilphiperfolan-8-beta-ol synthase (PSPS) (EC 4.2.3.74) (Botrydial synthesis protein 2) (Calcineurin-dependent protein 15) (Sesquiterpene cyclase BOT2) (Sesquiterpene synthase BOT2)
[hchA A8C65_13880 A9R57_25255 AKG99_20940 AMK83_16550 B7C53_22525 B9M99_11580 B9T59_01945 BJJ90_15205 BMT49_12710 BMT53_00170 BUE81_10670 BW690_17225 BZL69_29425 C2U48_24800 C5715_19445 C5N07_21380 C6669_19295 C7B06_02290 C7B07_03930 CDL37_00765 CG691_19145 CG705_13560 CG706_14580 CIJ94_05515 COD46_23180 CRD98_26150 D3I61_11545 DL800_09215 DNQ41_14245 DQE83_22775 DTL43_21780 DTL84_23375 DTM25_06080 EC95NR1_00961 ERS085379_01273 ERS085386_05041 HMPREF3040_01583 HW43_13705 NCTC10082_04431 NCTC10418_03071 NCTC10767_03558 NCTC11022_01867 NCTC11126_04427 NCTC11181_05650 NCTC12950_02263 NCTC13462_05714 NCTC8985_00529 NCTC9111_05933 NCTC9703_00277 PU06_24500 SAMEA3472055_03589 SAMEA3472056_01268 SAMEA3472070_00654 SAMEA3472080_04213 SAMEA3472090_03376 SAMEA3472110_00060 SAMEA3472112_00448 SAMEA3752372_00752 SAMEA3753106_00003 SAMEA3753391_00513 UN91_23615 WQ89_10695] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
[aro-1 aro-2 aro-4 aro-5 aro-9 B14H13.20 NCU016321] Pentafunctional AROM polypeptide [Includes: 3-dehydroquinate synthase (DHQS) (EC 4.2.3.4); 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS); Shikimate kinase (SK) (EC 2.7.1.71); 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10); Shikimate dehydrogenase (EC 1.1.1.25)]
[BS TPS11 At5g44630 K15C23.7] Alpha-barbatene synthase (AtBS) (EC 4.2.3.69) (Beta-chamigrene synthase) (EC 4.2.3.78) (Terpeneoid synthase 11) (AtTPS11) (Thujopsene synthase) (EC 4.2.3.79)
[AS ac22 ag22] Bifunctional abietadiene synthase, chloroplastic ((-)-abieta-7(8),13(14)-diene synthase) (Abietadiene cyclase) (AgAS) (Agggabi) [Includes: Abietadiene synthase (EC 4.2.3.18) (Neoabietadiene synthase) (EC 4.2.3.132); Copalyl diphosphate synthase (EC 5.5.1.12)]
[TPS10 At2g24210 F27D4.12] Tricyclene synthase, chloroplastic (EC 4.2.3.105) ((E)-beta-ocimene synthase 0e23) (EC 4.2.3.106) (Myrcene synthase 1) (EC 4.2.3.15) (Terpenoid synthase 10) (AtTPS10)
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[atnM ANIA_07873] Fatty acid synthase beta subunit aflB (EC 2.3.1.86) (Aspercryptin biosynthesis cluster protein M) [Includes: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.59); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] malonyltransferase (EC 2.3.1.39); S-acyl fatty acid synthase thioesterase (EC 3.1.2.14)]
[prx2 ari1] Aristolochene synthase (AS) (EC 4.2.3.9) (PR-toxin biosynthesis protein 2) (Sesquiterpene cyclase)
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[VIT_19s0014g04930 VIT_00014569001 VITISV_013313 VITISV_030783 Vv19s0014g04930] (-)-germacrene D synthase (EC 4.2.3.22) (EC 4.2.3.75)
[TPS03 At4g16740 dl4395w FCAALL.18] Tricyclene synthase, chloroplastic (EC 4.2.3.105) ((E)-beta-ocimene synthase) (EC 4.2.3.106) ((E,E)-alpha-farnesene synthase) (EC 4.2.3.46) (Terpenoid synthase 3) (AtTPS03)
[ribA ribB ECBG_03107] Multifunctional fusion protein [Includes: GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12)]
[al-2 B22I21.230 NCU00585] Bifunctional lycopene cyclase/phytoene synthase (Protein albino-2) [Includes: Lycopene beta-cyclase (EC 5.5.1.19) (Carotene cyclase) (Lycopene cyclase); Phytoene synthase (EC 2.5.1.32)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P2; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[Pre C,C C core E PC pre-C pre-C/C PreC preC PreC/C preC/C precore-core HBVgp4] Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5)
[RHM2 MUM4 At1g53500 F22G10.13 T3F20.18] Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 (NDP-rhamnose synthase) (Protein MUCILAGE-MODIFIED 4) (Protein RHAMNOSE BIOSYNTHESIS 2) (Rhamnose biosynthetic enzyme 2) (AtRHM2) (UDP-L-rhamnose synthase MUM4) [Includes: UDP-glucose 4,6-dehydratase (EC 4.2.1.76); UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose 4-keto-reductase (EC 1.1.1.-) (EC 5.1.3.-)]
[iscS iscS_1 A6581_02145 A6592_14885 A8C65_03965 A8G17_10685 A8M42_18685 A9819_14635 A9R57_16930 AC067_03015 AC789_1c28660 ACN77_09430 ACN81_26435 ACU57_06285 ACU90_01375 AJ318_26005 AKG99_22280 AM270_07100 AM446_08145 AM464_04450 AM465_11700 AMK83_11225 AML07_10540 AML35_21525 APT94_12335 APU18_00295 APZ14_05615 ARC77_08945 AU473_09315 AUQ13_13105 AUS26_21555 AW059_05940 AW106_10960 AWP75_00135 AZZ83_002723 B1K96_17760 B7C53_13290 B9M99_15840 B9N33_21250 B9T59_21105 BE963_28425 BEN53_15845 BER14_02655 BET08_22520 BH694_10200 BHF46_00575 BHS81_15460 BHS87_14335 BIQ87_14690 BIU72_16435 BIZ41_13705 BJJ90_06620 BK248_16700 BK292_20650 BK334_04895 BK373_05915 BK375_00880 BK383_22845 BK400_09035 BMR23_12730 BMT49_16180 BMT53_23050 BMT91_09840 BTQ04_10030 BTQ06_16545 BUE81_08125 BVL39_14165 BW690_04500 BWP17_17035 BZL31_13665 BZL69_10285 C1I57_24205 C2M16_05920 C2U48_21435 C3K24_07520 C4J69_10615 C4K41_12560 C4M78_10890 C5N07_10225 C5P01_05670 C5P43_04165 C5P44_15165 C6669_16070 C6986_16375 C6B13_21190 C7235_06915 C7B02_18515 C7B06_11270 C7B07_12285 C7B08_05430 CA593_14170 CCZ14_18705 CCZ17_22060 CDL37_24785 CG691_06060 CG692_02695 CG705_05185 CG706_03765 CIJ94_05825 COD30_00935 COD46_11390 CR539_17655 CRD98_15000 CRE06_08785 CRM83_27605 CSB64_12500 CT143_05820 CT146_18385 CV83915_03587 CVH05_18115 CWM24_13125 CWS33_10120 CXB56_09960 D0X26_11620 D1900_21335 D2183_14465 D2F89_15600 D3I61_14705 DD762_08545 DIV22_32035 DIV25_09780 DL545_07355 DL800_19085 DNQ41_17815 DNR41_15780 DQE83_18635 DS732_18775 DS966_02860 DTL43_01800 DTL84_06515 DTL90_08325 DTM10_01260 DTM25_14855 DTM27_14340 DTM45_09080 EC1094V2_1138 EC3234A_44c01370 EC95NR1_01752 ECONIH1_14765 EL75_1117 EL79_1128 EL80_1131 ERS085365_01538 ERS085366_02045 ERS085374_00061 ERS085379_00921 ERS085383_02049 ERS085386_03188 ERS085404_01057 ERS085406_03472 ERS085411_02202 ERS085416_01266 ERS139211_00888 ERS150873_01415 ERS150876_00833 FORC28_1424 HW43_17050 JD73_17725 MJ49_18275 MS6198_28580 MS8345_02723 NCTC10090_04376 NCTC10766_01180 NCTC10767_02594 NCTC11181_03575 NCTC11341_00889 NCTC12950_01537 NCTC13125_04632 NCTC13462_05052 NCTC13846_01437 NCTC7152_01285 NCTC7922_00893 NCTC7927_01500 NCTC7928_01371 NCTC8009_03115 NCTC8179_04409 NCTC8450_04290 NCTC8500_01442 NCTC8621_01401 NCTC8959_02462 NCTC8960_04060 NCTC8985_06161 NCTC9007_03642 NCTC9010_01409 NCTC9036_01412 NCTC9037_01482 NCTC9045_01545 NCTC9050_04644 NCTC9055_03293 NCTC9058_00608 NCTC9062_01792 NCTC9073_04547 NCTC9075_01973 NCTC9111_01941 NCTC9119_01524 NCTC9434_01284 NCTC9701_01429 NCTC9703_01091 NCTC9706_04616 NCTC9775_05141 NCTC9777_02572 NCTC9962_00698 NCTC9969_01533 PU06_05300 RG28_09220 RK56_021935 RX35_01423 SAMEA3472033_00658 SAMEA3472044_02985 SAMEA3472047_01032 SAMEA3472055_00937 SAMEA3472056_00874 SAMEA3472070_00065 SAMEA3472080_01607 SAMEA3472090_01244 SAMEA3472108_03497 SAMEA3472110_00486 SAMEA3472112_00780 SAMEA3472114_03249 SAMEA3472147_00165 SAMEA3484427_00440 SAMEA3484429_00549 SAMEA3484433_03192 SAMEA3484434_00296 SAMEA3485101_04492 SAMEA3485113_03372 SAMEA3752372_01122 SAMEA3752557_00969 SAMEA3752559_00692 SAMEA3752620_00062 SAMEA3753064_03100 SAMEA3753097_02751 SAMEA3753106_01137 SAMEA3753164_00628 SAMEA3753290_03552 SAMEA3753300_01026 SAMEA3753391_02715 SAMEA3753397_00908 SK85_02782 SY51_14535 UC41_13245 UN91_26515 WM48_13555 WQ89_05730 WR15_01190 YDC107_1108] Cysteine desulfurase IscS (EC 2.8.1.7)
[ribB ribA ECAG_03022] Multifunctional fusion protein [Includes: GTP cyclohydrolase-2 (EC 3.5.4.25) (GTP cyclohydrolase II); 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (EC 4.1.99.12)]
[yjbN dusA A6581_03815 A9819_23140 AC789_1c44580 ACN77_13265 ACN81_05795 AW059_18320 B1K96_03640 B7C53_20030 B9M99_07285 B9T59_11200 BB545_04715 BE963_11655 BHS81_24320 BIU72_20630 BN17_40231 BTQ06_28285 BUE81_22495 BVL39_04970 BWP17_09085 BXT93_20165 BZL69_05000 C2U48_12360 C4J69_17345 C4M78_06330 C5N07_20225 C5P01_10975 C5P43_26750 C6669_07250 C7235_23350 C7B02_13830 CA593_05650 CG691_24515 CG705_24980 CG706_06955 CIJ94_13445 COD46_18670 CR538_23810 CRD98_24950 CRM83_18265 CVH05_02240 CWS33_16005 CXB56_26125 D0X26_12230 D3I61_23865 DD762_09595 DL545_23295 DNQ41_01750 DQE83_12890 DS732_01940 DTL84_03985 EC3234A_77c00420 EL75_4140 EL79_4345 EL80_4252 ERS085374_01630 ERS085383_01453 ERS085404_01248 HMPREF3040_01367 NCTC10090_02700 NCTC10418_07037 NCTC10764_02883 NCTC10865_05778 NCTC11112_02403 NCTC11181_01881 NCTC11341_02874 NCTC12950_05132 NCTC7152_04647 NCTC7927_05171 NCTC8450_00470 NCTC8985_03929 NCTC9010_04826 NCTC9037_04708 NCTC9045_05465 NCTC9050_02741 NCTC9062_03523 NCTC9077_05824 NCTC9701_04921 NCTC9775_03044 NCTC9777_01046 RK56_017030 RX35_03830 SAMEA3472055_01598 SAMEA3472067_03766 SAMEA3472108_01690 SAMEA3472114_02034 SAMEA3472147_04808 SAMEA3484427_03836 SAMEA3484429_02481 SAMEA3752559_00279 SAMEA3753064_01454 SAMEA3753290_01943 SAMEA3753300_00780] tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.-) (EC 1.3.1.91) (U20-specific dihydrouridine synthase) (U20-specific Dus) (tRNA-dihydrouridine synthase A)

Bibliography :
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