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HADH isoform 1 (Hydroxyacyl-CoA dehydrogenase)

 H2PE29_PONAB            Unreviewed;       314 AA.
H2PE29; A0A2J8XQD3;
21-MAR-2012, integrated into UniProtKB/TrEMBL.
21-MAR-2012, sequence version 1.
16-JAN-2019, entry version 39.
SubName: Full=HADH isoform 1 {ECO:0000313|EMBL:PNJ84234.1};
SubName: Full=Hydroxyacyl-CoA dehydrogenase {ECO:0000313|Ensembl:ENSPPYP00000016738};
Name=HADH {ECO:0000313|Ensembl:ENSPPYP00000016738};
ORFNames=CR201_G0000567 {ECO:0000313|EMBL:PNJ84234.1};
Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Pongo.
NCBI_TaxID=9601 {ECO:0000313|Ensembl:ENSPPYP00000016738, ECO:0000313|Proteomes:UP000001595};
[1] {ECO:0000313|Ensembl:ENSPPYP00000016738, ECO:0000313|Proteomes:UP000001595}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Wilson R.K., Mardis E.;
"A 6x draft sequence assembly of the Pongo pygmaeus abelii genome.";
Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|Ensembl:ENSPPYP00000016738}
IDENTIFICATION.
Ensembl;
Submitted (FEB-2012) to UniProtKB.
[3] {ECO:0000313|EMBL:PNJ84234.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Susie {ECO:0000313|EMBL:PNJ84234.1};
Pollen A., Hastie A., Hormozdiari F., Dougherty M., Liu R.,
Chaisson M., Hoppe E., Hill C., Pang A., Hillier L., Baker C.,
Armstrong J., Shendure J., Paten B., Wilson R., Chao H., Schneider V.,
Ventura M., Kronenberg Z., Murali S., Gordon D., Cantsilieris S.,
Munson K., Nelson B., Raja A., Underwood J., Diekhans M., Fiddes I.,
Haussler D., Eichler E.;
"High-resolution comparative analysis of great ape genomes.";
Submitted (DEC-2017) to the EMBL/GenBank/DDBJ databases.
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EMBL; ABGA01122417; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ABGA01122418; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ABGA01122419; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ABGA01122420; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; ABGA01122421; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; NDHI03003363; PNJ84234.1; -; Genomic_DNA.
STRING; 9601.ENSPPYP00000016738; -.
Ensembl; ENSPPYT00000017417; ENSPPYP00000016738; ENSPPYG00000014986.
eggNOG; KOG2304; Eukaryota.
eggNOG; COG1250; LUCA.
GeneTree; ENSGT00940000159984; -.
InParanoid; H2PE29; -.
OMA; MAHPMGP; -.
TreeFam; TF300886; -.
Proteomes; UP000001595; Chromosome 4.
GO; GO:0005739; C:mitochondrion; IEA:Ensembl.
GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
GO; GO:0003857; F:3-hydroxyacyl-CoA dehydrogenase activity; IEA:Ensembl.
GO; GO:0070403; F:NAD+ binding; IEA:InterPro.
GO; GO:0006631; P:fatty acid metabolic process; IEA:InterPro.
GO; GO:0120162; P:positive regulation of cold-induced thermogenesis; IEA:Ensembl.
Gene3D; 1.10.1040.10; -; 1.
InterPro; IPR022694; 3-OHacyl-CoA_DH.
InterPro; IPR006180; 3-OHacyl-CoA_DH_CS.
InterPro; IPR006176; 3-OHacyl-CoA_DH_NAD-bd.
InterPro; IPR006108; 3HC_DH_C.
InterPro; IPR008927; 6-PGluconate_DH-like_C_sf.
InterPro; IPR013328; 6PGD_dom2.
InterPro; IPR036291; NAD(P)-bd_dom_sf.
Pfam; PF00725; 3HCDH; 1.
Pfam; PF02737; 3HCDH_N; 1.
PIRSF; PIRSF000105; HCDH; 1.
SUPFAM; SSF48179; SSF48179; 1.
SUPFAM; SSF51735; SSF51735; 1.
PROSITE; PS00067; 3HCDH; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000001595};
NAD {ECO:0000256|PIRSR:PIRSR000105-2};
Reference proteome {ECO:0000313|Proteomes:UP000001595}.
DOMAIN 29 214 3HCDH_N. {ECO:0000259|Pfam:PF02737}.
DOMAIN 216 313 3HCDH. {ECO:0000259|Pfam:PF00725}.
NP_BIND 34 39 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 57 57 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 73 73 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
BINDING 80 80 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
BINDING 122 122 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 127 127 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 149 149 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
BINDING 149 149 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 173 173 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
BINDING 305 305 NAD. {ECO:0000256|PIRSR:PIRSR000105-2}.
SITE 170 170 Important for catalytic activity.
{ECO:0000256|PIRSR:PIRSR000105-1}.
SEQUENCE 314 AA; 34280 MW; 052D25EACE9A2C99 CRC64;
MAFVTRQFMR SVSSSSTASA SAKKIIVKHV TVIGGGLMGA GIAQVAAATG HTVVLVDQTE
DILAKSKKGI EESLRKVAKK KFAENPKAGD EFVEKTLSSI TTSTDAASVV HSADLVVEAI
VENLKVKNEL FKRLDKFAAE HTIFASNTSS LQITSIANAT TRQDRFAGLH FFNPVPVMKL
VEVIKTPMTS QKTFESLVDF SKALGKHPVS CKDTPGFIVN RLLVPYLMEA IRLYERGDAS
KEDIDTAMKL GAGYPMGPFE LLDYVGLDTT KFIVDGWHEM DAENPLHQPS PCLNKLVAEN
KFGKKTGEGF YKYK


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Kits Elisa; taq POLYMERASE

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