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Histone H2A

 H2A_CAEEL               Reviewed;         127 AA.
P09588; Q7JKF5;
01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 2.
13-FEB-2019, entry version 174.
RecName: Full=Histone H2A;
Name=his-3; ORFNames=T10C6.12;
and
Name=his-7; ORFNames=F45F2.4;
and
Name=his-12; ORFNames=ZK131.6;
and
Name=his-16; ORFNames=ZK131.10;
and
Name=his-19; ORFNames=K06C4.11;
and
Name=his-21; ORFNames=K06C4.3;
and
Name=his-30; ORFNames=F35H10.1;
and
Name=his-33; ORFNames=F17E9.13;
and
Name=his-43; ORFNames=F08G2.2;
and
Name=his-47; ORFNames=B0035.7;
and
Name=his-51; ORFNames=F07B7.10;
and
Name=his-53; ORFNames=F07B7.3;
and
Name=his-57; ORFNames=F54E12.5;
and
Name=his-61; ORFNames=F55G1.10;
and
Name=his-65; ORFNames=H02I12.7;
and
Name=his-68; ORFNames=T23D8.6;
Caenorhabditis elegans.
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
NCBI_TaxID=6239;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
PubMed=2544730; DOI=10.1016/0022-2836(89)90566-4;
Roberts S.B., Emmons S.W., Childs G.;
"Nucleotide sequences of Caenorhabditis elegans core histone genes.
Genes for different histone classes share common flanking sequence
elements.";
J. Mol. Biol. 206:567-577(1989).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Bristol N2;
PubMed=9851916; DOI=10.1126/science.282.5396.2012;
The C. elegans sequencing consortium;
"Genome sequence of the nematode C. elegans: a platform for
investigating biology.";
Science 282:2012-2018(1998).
[3]
PROTEIN SEQUENCE OF 2-127, AND ACETYLATION AT SER-2; LYS-6; LYS-9 AND
LYS-11.
STRAIN=DR27;
PubMed=3606579; DOI=10.1042/bj2430297;
Vanfleteren J.R., van Bun S.M., van Beeumen J.J.;
"The primary structure of histone H2A from the nematode Caenorhabditis
elegans.";
Biochem. J. 243:297-300(1987).
[4]
PHOSPHORYLATION AT SER-2.
PubMed=15133681; DOI=10.1007/s00412-004-0281-9;
Barber C.M., Turner F.B., Wang Y., Hagstrom K., Taverna S.D.,
Mollah S., Ueberheide B., Meyer B.J., Hunt D.F., Cheung P.,
Allis C.D.;
"The enhancement of histone H4 and H2A serine 1 phosphorylation during
mitosis and S-phase is evolutionarily conserved.";
Chromosoma 112:360-371(2004).
[5]
UBIQUITINATION.
PubMed=15525528; DOI=10.1016/j.devcel.2004.10.005;
de Napoles M., Mermoud J.E., Wakao R., Tang Y.A., Endoh M.,
Appanah R., Nesterova T.B., Silva J., Otte A.P., Vidal M., Koseki H.,
Brockdorff N.;
"Polycomb group proteins Ring1A/B link ubiquitylation of histone H2A
to heritable gene silencing and X inactivation.";
Dev. Cell 7:663-676(2004).
-!- FUNCTION: Core component of nucleosome. Nucleosomes wrap and
compact DNA into chromatin, limiting DNA accessibility to the
cellular machineries which require DNA as a template. Histones
thereby play a central role in transcription regulation, DNA
repair, DNA replication and chromosomal stability. DNA
accessibility is regulated via a complex set of post-translational
modifications of histones, also called histone code, and
nucleosome remodeling.
-!- SUBUNIT: The nucleosome is a histone octamer containing two
molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4
heterotetramer and two H2A-H2B heterodimers. The octamer wraps
approximately 147 bp of DNA.
-!- SUBCELLULAR LOCATION: Nucleus. Chromosome.
-!- PTM: Monoubiquitination of Lys-121 gives a specific tag for
epigenetic transcriptional repression. {ECO:0000305}.
-!- PTM: Phosphorylation on Ser-2 is enhanced during mitosis.
Phosphorylation on Ser-2 directly represses transcription (By
similarity). {ECO:0000250}.
-!- SIMILARITY: Belongs to the histone H2A family. {ECO:0000305}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; X15633; CAA33641.1; -; Genomic_DNA.
EMBL; FO081169; CCD69634.1; -; Genomic_DNA.
EMBL; FO081135; CCD69397.1; -; Genomic_DNA.
EMBL; FO081551; CCD72371.1; -; Genomic_DNA.
EMBL; FO081551; CCD72361.1; -; Genomic_DNA.
EMBL; FO081223; CCD70021.1; -; Genomic_DNA.
EMBL; Z73102; CAA97414.1; -; Genomic_DNA.
EMBL; Z81128; CAB03399.1; -; Genomic_DNA.
EMBL; Z81495; CAB04056.1; -; Genomic_DNA.
EMBL; Z82271; CAB05212.1; -; Genomic_DNA.
EMBL; Z83245; CAB05836.1; -; Genomic_DNA.
EMBL; Z83245; CAB05838.1; -; Genomic_DNA.
EMBL; Z92789; CAB07221.1; -; Genomic_DNA.
EMBL; Z93388; CAB07656.1; -; Genomic_DNA.
EMBL; FO081059; CCD68872.1; -; Genomic_DNA.
EMBL; FO081059; CCD68866.1; -; Genomic_DNA.
EMBL; FO081018; CCD68534.1; -; Genomic_DNA.
PIR; S04238; HSKW2A.
RefSeq; NP_492642.1; NM_060241.4.
RefSeq; NP_496887.1; NM_064486.3.
RefSeq; NP_496891.1; NM_064490.1.
RefSeq; NP_496898.1; NM_064497.1.
RefSeq; NP_501201.1; NM_068800.3.
RefSeq; NP_501404.1; NM_069003.1.
RefSeq; NP_501408.1; NM_069007.1.
RefSeq; NP_502131.1; NM_069730.4.
RefSeq; NP_502141.1; NM_069740.1.
RefSeq; NP_502150.1; NM_069749.1.
RefSeq; NP_505198.1; NM_072797.1.
RefSeq; NP_505277.1; NM_072876.1.
RefSeq; NP_505280.1; NM_072879.1.
RefSeq; NP_505293.1; NM_072892.1.
RefSeq; NP_505296.1; NM_072895.1.
RefSeq; NP_507032.1; NM_074631.3.
UniGene; Cel.12763; -.
UniGene; Cel.14855; -.
UniGene; Cel.16705; -.
UniGene; Cel.21396; -.
UniGene; Cel.21446; -.
UniGene; Cel.21869; -.
UniGene; Cel.28727; -.
UniGene; Cel.28728; -.
UniGene; Cel.3208; -.
UniGene; Cel.32608; -.
UniGene; Cel.32622; -.
UniGene; Cel.32841; -.
UniGene; Cel.32966; -.
ProteinModelPortal; P09588; -.
SMR; P09588; -.
BioGrid; 38282; 1.
BioGrid; 42639; 1.
BioGrid; 45064; 2.
BioGrid; 51394; 1.
BioGrid; 56170; 1.
BioGrid; 56178; 1.
STRING; 6239.ZK131.6; -.
iPTMnet; P09588; -.
EPD; P09588; -.
PaxDb; P09588; -.
PRIDE; P09588; -.
EnsemblMetazoa; B0035.7; B0035.7; WBGene00001921.
EnsemblMetazoa; F07B7.10; F07B7.10; WBGene00001925.
EnsemblMetazoa; F07B7.3; F07B7.3; WBGene00001927.
EnsemblMetazoa; F08G2.2; F08G2.2; WBGene00001917.
EnsemblMetazoa; F17E9.13; F17E9.13; WBGene00001907.
EnsemblMetazoa; F35H10.1; F35H10.1; WBGene00001904.
EnsemblMetazoa; F45F2.4; F45F2.4; WBGene00001881.
EnsemblMetazoa; F54E12.5a; F54E12.5a; WBGene00001931.
EnsemblMetazoa; F55G1.10; F55G1.10; WBGene00001935.
EnsemblMetazoa; H02I12.7; H02I12.7; WBGene00001939.
EnsemblMetazoa; K06C4.11; K06C4.11; WBGene00001893.
EnsemblMetazoa; K06C4.3; K06C4.3; WBGene00001895.
EnsemblMetazoa; T10C6.12; T10C6.12; WBGene00001877.
EnsemblMetazoa; T23D8.6; T23D8.6; WBGene00001942.
EnsemblMetazoa; ZK131.10; ZK131.10; WBGene00001890.
EnsemblMetazoa; ZK131.6; ZK131.6; WBGene00001886.
GeneID; 172860; -.
GeneID; 175025; -.
GeneID; 175028; -.
GeneID; 175034; -.
GeneID; 177521; -.
GeneID; 178048; -.
GeneID; 178056; -.
GeneID; 179261; -.
GeneID; 179265; -.
GeneID; 180073; -.
GeneID; 184112; -.
GeneID; 186671; -.
GeneID; 191669; -.
GeneID; 191676; -.
GeneID; 191678; -.
GeneID; 259800; -.
KEGG; cel:CELE_B0035.7; -.
KEGG; cel:CELE_F07B7.10; -.
KEGG; cel:CELE_F07B7.3; -.
KEGG; cel:CELE_F08G2.2; -.
KEGG; cel:CELE_F17E9.13; -.
KEGG; cel:CELE_F35H10.1; -.
KEGG; cel:CELE_F45F2.4; -.
KEGG; cel:CELE_F55G1.10; -.
KEGG; cel:CELE_H02I12.7; -.
KEGG; cel:CELE_K06C4.11; -.
KEGG; cel:CELE_K06C4.3; -.
KEGG; cel:CELE_T10C6.12; -.
KEGG; cel:CELE_T23D8.6; -.
KEGG; cel:CELE_ZK131.10; -.
KEGG; cel:CELE_ZK131.6; -.
UCSC; T23D8.6; c. elegans.
CTD; 172860; -.
CTD; 175025; -.
CTD; 175028; -.
CTD; 175034; -.
CTD; 177521; -.
CTD; 178048; -.
CTD; 178056; -.
CTD; 179261; -.
CTD; 179265; -.
CTD; 180073; -.
CTD; 184112; -.
CTD; 186671; -.
CTD; 191669; -.
CTD; 191676; -.
CTD; 191678; -.
CTD; 259800; -.
WormBase; B0035.7; CE04501; WBGene00001921; his-47.
WormBase; F07B7.10; CE04501; WBGene00001925; his-51.
WormBase; F07B7.3; CE04501; WBGene00001927; his-53.
WormBase; F08G2.2; CE04501; WBGene00001917; his-43.
WormBase; F17E9.13; CE04501; WBGene00001907; his-33.
WormBase; F35H10.1; CE04501; WBGene00001904; his-30.
WormBase; F45F2.4; CE04501; WBGene00001881; his-7.
WormBase; F54E12.5; CE04501; WBGene00001931; his-57.
WormBase; F55G1.10; CE04501; WBGene00001935; his-61.
WormBase; H02I12.7; CE04501; WBGene00001939; his-65.
WormBase; K06C4.11; CE04501; WBGene00001893; his-19.
WormBase; K06C4.3; CE04501; WBGene00001895; his-21.
WormBase; T10C6.12; CE04501; WBGene00001877; his-3.
WormBase; T23D8.6; CE04501; WBGene00001942; his-68.
WormBase; ZK131.10; CE04501; WBGene00001890; his-16.
WormBase; ZK131.6; CE04501; WBGene00001886; his-12.
eggNOG; KOG1756; Eukaryota.
eggNOG; COG5262; LUCA.
GeneTree; ENSGT00940000154354; -.
HOGENOM; HOG000234652; -.
InParanoid; P09588; -.
KO; K11251; -.
OMA; WAGGCAR; -.
OrthoDB; 1504122at2759; -.
PhylomeDB; P09588; -.
PRO; PR:P09588; -.
Proteomes; UP000001940; Chromosome I.
Proteomes; UP000001940; Chromosome II.
Proteomes; UP000001940; Chromosome IV.
Proteomes; UP000001940; Chromosome V.
Bgee; WBGene00001877; Expressed in 3 organ(s), highest expression level in pharyngeal muscle cell (C elegans).
ExpressionAtlas; P09588; baseline.
GO; GO:0000790; C:nuclear chromatin; IBA:GO_Central.
GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
GO; GO:0003677; F:DNA binding; IBA:GO_Central.
GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
GO; GO:0006325; P:chromatin organization; IBA:GO_Central.
GO; GO:0006281; P:DNA repair; NAS:UniProtKB.
GO; GO:0006355; P:regulation of transcription, DNA-templated; NAS:UniProtKB.
CDD; cd00074; H2A; 1.
Gene3D; 1.10.20.10; -; 1.
InterPro; IPR009072; Histone-fold.
InterPro; IPR002119; Histone_H2A.
InterPro; IPR007125; Histone_H2A/H2B/H3.
InterPro; IPR032454; Histone_H2A_C.
InterPro; IPR032458; Histone_H2A_CS.
Pfam; PF00125; Histone; 1.
Pfam; PF16211; Histone_H2A_C; 1.
PRINTS; PR00620; HISTONEH2A.
SMART; SM00414; H2A; 1.
SUPFAM; SSF47113; SSF47113; 1.
PROSITE; PS00046; HISTONE_H2A; 1.
1: Evidence at protein level;
Acetylation; Chromosome; Complete proteome; Direct protein sequencing;
DNA-binding; Isopeptide bond; Methylation; Nucleosome core; Nucleus;
Phosphoprotein; Reference proteome; Ubl conjugation.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:3606579}.
CHAIN 2 127 Histone H2A.
/FTId=PRO_0000055210.
MOD_RES 2 2 N-acetylserine.
{ECO:0000305|PubMed:3606579}.
MOD_RES 2 2 Phosphoserine.
{ECO:0000305|PubMed:15133681}.
MOD_RES 6 6 N6-acetyllysine; partial.
{ECO:0000269|PubMed:3606579}.
MOD_RES 9 9 N6-acetyllysine; partial.
{ECO:0000269|PubMed:3606579}.
MOD_RES 11 11 N6-acetyllysine; partial.
{ECO:0000269|PubMed:3606579}.
MOD_RES 106 106 N5-methylglutamine. {ECO:0000250}.
CROSSLNK 121 121 Glycyl lysine isopeptide (Lys-Gly)
(interchain with G-Cter in ubiquitin).
{ECO:0000305|PubMed:15525528}.
SEQUENCE 127 AA; 13405 MW; FBF085558F1BD340 CRC64;
MSGRGKGGKA KTGGKAKSRS SRAGLQFPVG RLHRILRKGN YAQRVGAGAP VYLAAVLEYL
AAEVLELAGN AARDNKKTRI APRHLQLAVR NDEELNKLLA GVTIAQGGVL PNIQAVLLPK
KTGGDKE


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Pathways :
WP1079: Proteasome Degradation
WP1240: Proteasome Degradation
WP1530: miRNA regulation of DNA Damage Response
WP1545: miRNAs involved in DDR
WP1579: DNA damage response
WP183: Proteasome Degradation
WP2085: miRNAs involved in DDR
WP2087: miRNA regulation of DNA Damage Response
WP2361: Gastric cancer network 1
WP2366: Butyrate-induced histone acetylation
WP2369: Histone modifications
WP267: Proteasome Degradation
WP281: Proteasome Degradation
WP300: Histone modifications
WP302: Proteasome Degradation
WP519: Proteasome Degradation
WP654: ATM
WP707: DNA damage response
WP841: Proteasome Degradation
WP960: Proteasome Degradation

Related Genes :
[HIST1H2AB H2AFM; HIST1H2AE H2AFA] Histone H2A type 1-B/E (Histone H2A.2) (Histone H2A/a) (Histone H2A/m)
[HIST1H2AD H2AFG] Histone H2A type 1-D (Histone H2A.3) (Histone H2A/g)
[HIST2H2AA3 H2AFO HIST2H2AA; HIST2H2AA4] Histone H2A type 2-A (Histone H2A.2) (Histone H2A/o)
[HIST1H2AG H2AFP; HIST1H2AI H2AFC; HIST1H2AK H2AFD; HIST1H2AL H2AFI; HIST1H2AM H2AFN] Histone H2A type 1 (H2A.1) (Histone H2A/ptl)
[Hist2h2aa1; Hist2h2aa2] Histone H2A type 2-A (H2a-614) (H2a-615) (Histone H2A.2)
[H2afx H2a.x H2ax Hist5-2ax] Histone H2AX (H2a/x) (Histone H2A.X)
[HIST2H2AC H2AFQ] Histone H2A type 2-C (Histone H2A-GL101) (Histone H2A/q)
[H2AFY MACROH2A1] Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (Histone H2A.y) (H2A/y) (Medulloblastoma antigen MU-MB-50.205)
[H2afy] Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y)
[H2afy] Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y)
[H2AFY] Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y)
[His2Av H2AvD His2AvD CG5499] Histone H2A.v (H2A.F/Z) (H2A.Z)
[HIST1H2AJ H2AFE] Histone H2A type 1-J (Histone H2A/e)
[HIST1H2AC H2AFL] Histone H2A type 1-C (Histone H2A/l)
[HIST1H2AH HIST1H2AI] Histone H2A type 1-H (Histone H2A/s)
[HIST1H2AA H2AFR] Histone H2A type 1-A (Histone H2A/r)
[H2AFB2; H2AFB3 H2ABBD H2AFB] Histone H2A-Bbd type 2/3 (H2A Barr body-deficient) (H2A.Bbd)
[H2AFX H2AX] Histone H2AX (H2a/x) (Histone H2A.X)
[His2Av 5499 Dmel\CG5499 gamma-H2AV gamma-H2Av gamma-HIS2AV gamma-His2Av gammaH2AV gammaH2Av H2A H2A.F H2A.V H2a.V H2A.X H2A.Z H2AV H2Av H2av H2AV_DROM H2AvD H2avD h2AvD H2AX H2AZ HIS His his His2 His2A HIS2AV His2AV his2Av HIS2AVD His2AvD HisH2Av Hist Hist2av l(3)05146 l(3)810 l(3)97Dd l(3)L1602 Z CG5499 Dmel_CG5499] Histone H2A
[H2AFZ H2AZ] Histone H2A.Z (H2A/z)
[H2afz H2az] Histone H2A.Z (H2A/z)
[His2A H2a; His2A:CG31618 CG31618; His2A:CG33808 CG33808; His2A:CG33814 CG33814; His2A:CG33817 CG33817; His2A:CG33820 CG33820; His2A:CG33823 CG33823; His2A:CG33826 CG33826; His2A:CG33829 CG33829; His2A:CG33832 CG33832; His2A:CG33835 CG33835; His2A:CG33838 CG33838; His2A:CG33841 CG33841; His2A:CG33844 CG33844; His2A:CG33847 CG33847; His2A:CG33850 CG33850; His2A:CG33862 CG33862; His2A:CG33865 CG33865] Histone H2A
[H2afb1] Histone H2A-Bbd type 1 (H2A Barr body-deficient) (H2A.Bbd) (Histone H2A-like 2) (H2A.L.2) (H2AL2) (Histone H2Alike 2) (Testis-specific expressed gene 1 protein) (TSEG-1)
[H2AFB1] Histone H2A-Bbd type 1 (H2A Barr body-deficient) (H2A.B) (H2A.Bbd)
[HIST3H2A] Histone H2A type 3
[HTA1 H2A1 SPT11 YDR225W YD9934.10] Histone H2A.1
[HTA2 H2A2 YBL003C YBL0103] Histone H2A.2
[Hist3h2a] Histone H2A type 3
[Hist2h2ac Hist2h2ab] Histone H2A type 2-C (H2a-613B)
[Hist2h2ab] Histone H2A type 2-B (H2a-613A)

Bibliography :
[30882212] Effect of Nucleosome Assembly on Alkylation by a Dynamic Electrophile.
[30881588] Chlorpyrifos Suppresses Neutrophil Extracellular Traps in Carp by Promoting Necroptosis and Inhibiting Respiratory Burst Caused by the PKC/MAPK Pathway.
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