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Immunoglobulin superfamily member 11 (IgSF11)

 IGS11_RAT               Reviewed;         428 AA.
Q5U2P2;
05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
07-DEC-2004, sequence version 1.
25-MAY-2022, entry version 122.
RecName: Full=Immunoglobulin superfamily member 11;
Short=IgSF11;
Flags: Precursor;
Name=Igsf11;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Kidney;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA project:
the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
-!- FUNCTION: Functions as a cell adhesion molecule through homophilic
interaction. Stimulates cell growth (By similarity). {ECO:0000250}.
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Single-pass type I
membrane protein {ECO:0000250}.
-!- PTM: N-glycosylated. {ECO:0000250}.
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EMBL; BC085929; AAH85929.1; -; mRNA.
RefSeq; NP_001013138.1; NM_001013120.1.
AlphaFoldDB; Q5U2P2; -.
SMR; Q5U2P2; -.
STRING; 10116.ENSRNOP00000059779; -.
GlyGen; Q5U2P2; 1 site.
iPTMnet; Q5U2P2; -.
PhosphoSitePlus; Q5U2P2; -.
PaxDb; Q5U2P2; -.
Ensembl; ENSRNOT00000066997; ENSRNOP00000059779; ENSRNOG00000001525.
GeneID; 303926; -.
KEGG; rno:303926; -.
UCSC; RGD:1308758; rat.
CTD; 152404; -.
RGD; 1308758; Igsf11.
eggNOG; ENOG502QV48; Eukaryota.
GeneTree; ENSGT00940000156392; -.
HOGENOM; CLU_040549_3_0_1; -.
InParanoid; Q5U2P2; -.
OMA; WHNPKPS; -.
OrthoDB; 841952at2759; -.
PhylomeDB; Q5U2P2; -.
TreeFam; TF330875; -.
PRO; PR:Q5U2P2; -.
Proteomes; UP000002494; Chromosome 11.
Bgee; ENSRNOG00000001525; Expressed in female gonad and 20 other tissues.
Genevisible; Q5U2P2; RN.
GO; GO:0005911; C:cell-cell junction; ISO:RGD.
GO; GO:0060076; C:excitatory synapse; IMP:UniProtKB.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO; GO:0014069; C:postsynaptic density; IDA:UniProtKB.
GO; GO:0035255; F:ionotropic glutamate receptor binding; IPI:UniProtKB.
GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; ISS:UniProtKB.
GO; GO:0045185; P:maintenance of protein location; IMP:UniProtKB.
GO; GO:1900273; P:positive regulation of long-term synaptic potentiation; ISO:RGD.
GO; GO:0061885; P:positive regulation of mini excitatory postsynaptic potential; IMP:UniProtKB.
GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
GO; GO:0048167; P:regulation of synaptic plasticity; ISO:RGD.
Gene3D; 2.60.40.10; -; 2.
InterPro; IPR007110; Ig-like_dom.
InterPro; IPR036179; Ig-like_dom_sf.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR003599; Ig_sub.
InterPro; IPR003598; Ig_sub2.
InterPro; IPR013106; Ig_V-set.
InterPro; IPR042758; IGSF11.
PANTHER; PTHR44699; PTHR44699; 1.
Pfam; PF07686; V-set; 1.
SMART; SM00409; IG; 2.
SMART; SM00408; IGc2; 1.
SUPFAM; SSF48726; SSF48726; 2.
PROSITE; PS50835; IG_LIKE; 2.
2: Evidence at transcript level;
Cell adhesion; Cell membrane; Disulfide bond; Glycoprotein;
Growth regulation; Immunoglobulin domain; Membrane; Methylation; Receptor;
Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix.
SIGNAL 1..22
/evidence="ECO:0000255"
CHAIN 23..428
/note="Immunoglobulin superfamily member 11"
/id="PRO_0000317372"
TOPO_DOM 23..239
/note="Extracellular"
/evidence="ECO:0000255"
TRANSMEM 240..260
/note="Helical"
/evidence="ECO:0000255"
TOPO_DOM 261..428
/note="Cytoplasmic"
/evidence="ECO:0000255"
DOMAIN 23..136
/note="Ig-like V-type"
DOMAIN 144..234
/note="Ig-like C2-type"
MOD_RES 375
/note="Omega-N-methylarginine"
/evidence="ECO:0000250|UniProtKB:P0C673"
CARBOHYD 102
/note="N-linked (GlcNAc...) asparagine"
/evidence="ECO:0000255"
DISULFID 44..120
/evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
DISULFID 165..215
/evidence="ECO:0000255|PROSITE-ProRule:PRU00114"
SEQUENCE 428 AA; 46021 MW; C628CEE36D03A1F2 CRC64;
MTRRRSALAS WLLLSLLGVA ASLEVSESPG SVQVARGQTA VLPCAFSTSA ALLNLNVIWM
VIPLSNANQP EQVILYQGGQ MFDGALRFHG RVGFTGTMPA TNVSIFINNT QLSDTGTYQC
LVNNLPDRGG RNIGVTGLTV LVPPSAPNCQ IQGSQDIGSD VILLCSSEEG IPRPTYLWEK
LDNTLKLPPT ATQDQVQGTV TIRNISALSS GLYQCVASNA IGTSTCLLDL QVISPQPRSV
GVIAGAVGTG AVLIVICLAL TSGAFFYWRS KNKEEEEEEI PNEIREDDLP PKCSSAKAFH
TEISSSENNT LTSSNTYNSR YWNNNPKPHK NTESFNHFSD LRQSFSGNAV IPSIYANGNH
LVLGPHKTLV VTANRGSSPQ VMPRNNGSVS RKPWSQHTHS YTVSQMTLER IGAVPVMVPA
QSRAGSLV


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