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Interferon gamma (IFN-gamma)

 IFNG_MOUSE              Reviewed;         155 AA.
P01580; Q542B8;
21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
21-JUL-1986, sequence version 1.
18-SEP-2019, entry version 159.
RecName: Full=Interferon gamma;
Short=IFN-gamma;
Flags: Precursor;
Name=Ifng;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=6310596; DOI=10.1073/pnas.80.19.5842;
Gray P.W., Goeddel D.V.;
"Cloning and expression of murine immune interferon cDNA.";
Proc. Natl. Acad. Sci. U.S.A. 80:5842-5846(1983).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=NOD; TISSUE=Spleen;
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
-!- FUNCTION: Produced by lymphocytes activated by specific antigens
or mitogens. IFN-gamma, in addition to having antiviral activity,
has important immunoregulatory functions. It is a potent activator
of macrophages, it has antiproliferative effects on transformed
cells and it can potentiate the antiviral and antitumor effects of
the type I interferons.
-!- SUBUNIT: Homodimer.
-!- INTERACTION:
P52293:Kpna2; NbExp=5; IntAct=EBI-7892102, EBI-3043908;
-!- SUBCELLULAR LOCATION: Secreted.
-!- TISSUE SPECIFICITY: Released primarily from activated T
lymphocytes.
-!- SIMILARITY: Belongs to the type II (or gamma) interferon family.
{ECO:0000305}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
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EMBL; K00083; AAA37894.1; -; mRNA.
EMBL; AK089574; BAC40926.1; -; mRNA.
EMBL; BC119063; AAI19064.1; -; mRNA.
EMBL; BC119065; AAI19066.1; -; mRNA.
CCDS; CCDS24200.1; -.
PIR; A01844; IVMSG.
RefSeq; NP_032363.1; NM_008337.4.
SMR; P01580; -.
IntAct; P01580; 2.
MINT; P01580; -.
STRING; 10090.ENSMUSP00000063800; -.
PhosphoSitePlus; P01580; -.
EPD; P01580; -.
PaxDb; P01580; -.
PRIDE; P01580; -.
Ensembl; ENSMUST00000068592; ENSMUSP00000063800; ENSMUSG00000055170.
GeneID; 15978; -.
KEGG; mmu:15978; -.
UCSC; uc007hdy.1; mouse.
CTD; 3458; -.
MGI; MGI:107656; Ifng.
eggNOG; ENOG410IWSY; Eukaryota.
eggNOG; ENOG410Z8I5; LUCA.
GeneTree; ENSGT00390000007831; -.
HOGENOM; HOG000254784; -.
InParanoid; P01580; -.
KO; K04687; -.
OMA; WKEESDK; -.
OrthoDB; 1382686at2759; -.
PhylomeDB; P01580; -.
TreeFam; TF336308; -.
Reactome; R-MMU-877300; Interferon gamma signaling.
Reactome; R-MMU-877312; Regulation of IFNG signaling.
PRO; PR:P01580; -.
Proteomes; UP000000589; Chromosome 10.
Bgee; ENSMUSG00000055170; Expressed in 15 organ(s), highest expression level in bone marrow.
Genevisible; P01580; MM.
GO; GO:0005737; C:cytoplasm; ISO:MGI.
GO; GO:0009897; C:external side of plasma membrane; IDA:MGI.
GO; GO:0005576; C:extracellular region; ISO:MGI.
GO; GO:0005615; C:extracellular space; IDA:CAFA.
GO; GO:0043005; C:neuron projection; ISO:MGI.
GO; GO:0043204; C:perikaryon; ISO:MGI.
GO; GO:0005125; F:cytokine activity; IDA:MGI.
GO; GO:0005133; F:interferon-gamma receptor binding; IEA:InterPro.
GO; GO:0002250; P:adaptive immune response; IDA:MGI.
GO; GO:0019882; P:antigen processing and presentation; IDA:MGI.
GO; GO:0006915; P:apoptotic process; ISO:MGI.
GO; GO:0048143; P:astrocyte activation; IGI:ARUK-UCL.
GO; GO:0002302; P:CD8-positive, alpha-beta T cell differentiation involved in immune response; IDA:MGI.
GO; GO:0007050; P:cell cycle arrest; ISO:MGI.
GO; GO:0071351; P:cellular response to interleukin-18; IDA:MGI.
GO; GO:0071222; P:cellular response to lipopolysaccharide; IDA:MGI.
GO; GO:0042742; P:defense response to bacterium; IDA:MGI.
GO; GO:0042832; P:defense response to protozoan; IDA:MGI.
GO; GO:0051607; P:defense response to virus; IDA:MGI.
GO; GO:0030968; P:endoplasmic reticulum unfolded protein response; IDA:MGI.
GO; GO:0097191; P:extrinsic apoptotic signaling pathway; ISO:MGI.
GO; GO:0006959; P:humoral immune response; IDA:MGI.
GO; GO:0006925; P:inflammatory cell apoptotic process; IMP:MGI.
GO; GO:0060333; P:interferon-gamma-mediated signaling pathway; IDA:CAFA.
GO; GO:0001774; P:microglial cell activation; IGI:ARUK-UCL.
GO; GO:1900222; P:negative regulation of amyloid-beta clearance; IDA:ARUK-UCL.
GO; GO:0008285; P:negative regulation of cell population proliferation; ISO:MGI.
GO; GO:0030857; P:negative regulation of epithelial cell differentiation; ISO:MGI.
GO; GO:0048147; P:negative regulation of fibroblast proliferation; ISO:MGI.
GO; GO:0010629; P:negative regulation of gene expression; IDA:ARUK-UCL.
GO; GO:0072125; P:negative regulation of glomerular mesangial cell proliferation; ISO:MGI.
GO; GO:0032700; P:negative regulation of interleukin-17 production; ISO:MGI.
GO; GO:0031642; P:negative regulation of myelination; IDA:MGI.
GO; GO:0045671; P:negative regulation of osteoclast differentiation; IDA:MGI.
GO; GO:0048662; P:negative regulation of smooth muscle cell proliferation; ISO:MGI.
GO; GO:1902948; P:negative regulation of tau-protein kinase activity; ISO:MGI.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; ISO:MGI.
GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:CAFA.
GO; GO:0001781; P:neutrophil apoptotic process; IMP:MGI.
GO; GO:0030593; P:neutrophil chemotaxis; IDA:MGI.
GO; GO:0044794; P:positive regulation by host of viral process; IGI:ARUK-UCL.
GO; GO:1902004; P:positive regulation of amyloid-beta formation; IDA:ARUK-UCL.
GO; GO:0043065; P:positive regulation of apoptotic process; ISO:MGI.
GO; GO:0010508; P:positive regulation of autophagy; ISS:UniProtKB.
GO; GO:0060559; P:positive regulation of calcidiol 1-monooxygenase activity; ISO:MGI.
GO; GO:0032834; P:positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response; ISO:MGI.
GO; GO:0045785; P:positive regulation of cell adhesion; ISO:MGI.
GO; GO:0008284; P:positive regulation of cell population proliferation; ISO:MGI.
GO; GO:1901857; P:positive regulation of cellular respiration; IDA:ARUK-UCL.
GO; GO:0045080; P:positive regulation of chemokine biosynthetic process; IDA:MGI.
GO; GO:1904798; P:positive regulation of core promoter binding; ISO:MGI.
GO; GO:0010634; P:positive regulation of epithelial cell migration; ISO:MGI.
GO; GO:0060550; P:positive regulation of fructose 1,6-bisphosphate 1-phosphatase activity; ISO:MGI.
GO; GO:0060552; P:positive regulation of fructose 1,6-bisphosphate metabolic process; ISO:MGI.
GO; GO:0010628; P:positive regulation of gene expression; IDA:ARUK-UCL.
GO; GO:0045821; P:positive regulation of glycolytic process; IDA:ARUK-UCL.
GO; GO:0050725; P:positive regulation of interleukin-1 beta biosynthetic process; IDA:ARUK-UCL.
GO; GO:0050718; P:positive regulation of interleukin-1 beta secretion; IMP:MGI.
GO; GO:0045084; P:positive regulation of interleukin-12 biosynthetic process; IDA:MGI.
GO; GO:0032735; P:positive regulation of interleukin-12 production; IDA:MGI.
GO; GO:0032747; P:positive regulation of interleukin-23 production; ISO:MGI.
GO; GO:0045410; P:positive regulation of interleukin-6 biosynthetic process; IDA:MGI.
GO; GO:1904440; P:positive regulation of iron ion import across plasma membrane; IDA:ARUK-UCL.
GO; GO:0048304; P:positive regulation of isotype switching to IgG isotypes; IDA:MGI.
GO; GO:0051712; P:positive regulation of killing of cells of other organism; ISO:MGI.
GO; GO:0051044; P:positive regulation of membrane protein ectodomain proteolysis; ISO:MGI.
GO; GO:0045348; P:positive regulation of MHC class II biosynthetic process; IDA:BHF-UCL.
GO; GO:0050769; P:positive regulation of neurogenesis; ISO:MGI.
GO; GO:1901216; P:positive regulation of neuron death; IGI:ARUK-UCL.
GO; GO:0045666; P:positive regulation of neuron differentiation; ISO:MGI.
GO; GO:0045429; P:positive regulation of nitric oxide biosynthetic process; IDA:MGI.
GO; GO:0051770; P:positive regulation of nitric-oxide synthase biosynthetic process; IDA:ARUK-UCL.
GO; GO:0051173; P:positive regulation of nitrogen compound metabolic process; IGI:ARUK-UCL.
GO; GO:1904783; P:positive regulation of NMDA glutamate receptor activity; ISO:MGI.
GO; GO:0045672; P:positive regulation of osteoclast differentiation; ISO:MGI.
GO; GO:0033141; P:positive regulation of peptidyl-serine phosphorylation of STAT protein; ISO:MGI.
GO; GO:0050766; P:positive regulation of phagocytosis; IDA:ARUK-UCL.
GO; GO:0031334; P:positive regulation of protein complex assembly; ISO:MGI.
GO; GO:0090312; P:positive regulation of protein deacetylation; IDA:CAFA.
GO; GO:0042307; P:positive regulation of protein import into nucleus; ISO:MGI.
GO; GO:0001934; P:positive regulation of protein phosphorylation; ISO:MGI.
GO; GO:0071902; P:positive regulation of protein serine/threonine kinase activity; ISO:MGI.
GO; GO:0010870; P:positive regulation of receptor biosynthetic process; IGI:ARUK-UCL.
GO; GO:0034393; P:positive regulation of smooth muscle cell apoptotic process; ISO:MGI.
GO; GO:0032224; P:positive regulation of synaptic transmission, cholinergic; ISO:MGI.
GO; GO:0042102; P:positive regulation of T cell proliferation; IDA:MGI.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:MGI.
GO; GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:MGI.
GO; GO:2000309; P:positive regulation of tumor necrosis factor (ligand) superfamily member 11 production; ISO:MGI.
GO; GO:0042535; P:positive regulation of tumor necrosis factor biosynthetic process; IDA:ARUK-UCL.
GO; GO:0032760; P:positive regulation of tumor necrosis factor production; IDA:BHF-UCL.
GO; GO:1904469; P:positive regulation of tumor necrosis factor secretion; IGI:ARUK-UCL.
GO; GO:0042531; P:positive regulation of tyrosine phosphorylation of STAT protein; ISO:MGI.
GO; GO:0060557; P:positive regulation of vitamin D biosynthetic process; ISO:MGI.
GO; GO:0007259; P:receptor signaling pathway via JAK-STAT; IGI:ARUK-UCL.
GO; GO:0050691; P:regulation of defense response to virus by host; IDA:CAFA.
GO; GO:0060251; P:regulation of glial cell proliferation; ISO:MGI.
GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
GO; GO:2000345; P:regulation of hepatocyte proliferation; ISO:MGI.
GO; GO:0050776; P:regulation of immune response; IDA:MGI.
GO; GO:0050796; P:regulation of insulin secretion; ISO:MGI.
GO; GO:0098908; P:regulation of neuronal action potential; ISO:MGI.
GO; GO:0010835; P:regulation of protein ADP-ribosylation; ISO:MGI.
GO; GO:0002026; P:regulation of the force of heart contraction; ISO:MGI.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IDA:MGI.
GO; GO:0042493; P:response to drug; IEA:Ensembl.
GO; GO:0009615; P:response to virus; ISO:MGI.
GO; GO:0050954; P:sensory perception of mechanical stimulus; ISO:MGI.
GO; GO:0050852; P:T cell receptor signaling pathway; IDA:MGI.
InterPro; IPR009079; 4_helix_cytokine-like_core.
InterPro; IPR002069; Interferon_gamma.
PANTHER; PTHR11419; PTHR11419; 1.
Pfam; PF00714; IFN-gamma; 1.
PIRSF; PIRSF001936; IFN-gamma; 1.
SUPFAM; SSF47266; SSF47266; 1.
1: Evidence at protein level;
Antiviral defense; Complete proteome; Cytokine; Glycoprotein;
Growth regulation; Reference proteome; Secreted; Signal.
SIGNAL 1 22 {ECO:0000255}.
CHAIN 23 155 Interferon gamma.
/FTId=PRO_0000016453.
CARBOHYD 38 38 N-linked (GlcNAc...) asparagine.
{ECO:0000250}.
CARBOHYD 90 90 N-linked (GlcNAc...) asparagine.
{ECO:0000250}.
SEQUENCE 155 AA; 17907 MW; 7EE80BAECB42071A CRC64;
MNATHCILAL QLFLMAVSGC YCHGTVIESL ESLNNYFNSS GIDVEEKSLF LDIWRNWQKD
GDMKILQSQI ISFYLRLFEV LKDNQAISNN ISVIESHLIT TFFSNSKAKK DAFMSIAKFE
VNNPQVQRQA FNELIRVVHQ LLPESSLRKR KRSRC


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Related Genes :
[psbX] Photosystem II reaction center X protein
[ndhA] NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1)
[KK1_045969] 40S ribosomal protein SA
[KK1_006657] Uncharacterized protein
[ndhF] NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 7.1.1.-) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)
[KK1_031928] Tyrosine N-monooxygenase
[] UDP-glycosyltransferase homolog (Fragment)
[ndhA] NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 1) (NDH subunit 1) (NADH-plastoquinone oxidoreductase subunit 1)
[KK1_005898] Secologanin synthase
[ndhD] NAD(P)H-quinone oxidoreductase chain 4, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase, chain 4) (NADH-plastoquinone oxidoreductase chain 4)
[psbH] Photosystem II reaction center protein H (PSII-H)
[KK1_044146] Uncharacterized protein
[petB] Cytochrome b6
[ARD1] 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) (Acireductone dioxygenase (Fe(2+)-requiring)) (ARD) (Fe-ARD)
[COB] Cytochrome b (Fragment)
[ndhF] NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 7.1.1.-) (NADH-plastoquinone oxidoreductase subunit 5)
[ndhF] NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 7.1.1.-) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)
[atpF] ATP synthase subunit b, chloroplastic (ATP synthase F(0) sector subunit b) (ATPase subunit I)
[malate dehydrogenase] Malate dehydrogenase
[ndhE] NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit 4L) (NADH-plastoquinone oxidoreductase subunit 4L)
[g.33360] 4-alpha-glucanotransferase (EC 2.4.1.25) (Amylomaltase) (Disproportionating enzyme) (Fragment)
[ndhI] NAD(P)H-quinone oxidoreductase subunit I, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit I) (NDH subunit I) (NADH-plastoquinone oxidoreductase subunit I)
[ndhK] NAD(P)H-quinone oxidoreductase subunit K, chloroplastic (EC 7.1.1.-) (NAD(P)H dehydrogenase subunit K) (NADH-plastoquinone oxidoreductase subunit K)
[psbA] Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
[LOC101502735] Lipoxygenase (EC 1.13.11.-)
[AM588_10001736] Uncharacterized protein
[ndhF] NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC 7.1.1.-) (NADH-plastoquinone oxidoreductase subunit 5) (Fragment)
[LOC101491357] cytochrome P450 734A1-like isoform X1
[psbI] Photosystem II reaction center protein I (PSII-I) (PSII 4.8 kDa protein)
[petB] Cytochrome b6

Bibliography :
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[31532346] Increase of Plasma TNF- Is Associated with Decreased Levels of Blood Platelets in Clinical Dengue Infection.
[31531832] Reduction of Immune Activation and Partial Recovery of Staphylococcal Enterotoxin B-Induced Cytokine Production After Switching to an Integrase Strand Transfer Inhibitor-Containing Regimen: Results from an Observational Cohort Study.
[31530731] Tumor-derived TGF-β inhibits mitochondrial respiration to suppress IFN-γ production by human CD4 T cells.
[31530556] Safety and immune response of a live-attenuated herpes zoster vaccine in patients with systemic lupus erythematosus: a randomised placebo-controlled trial.
[31526800] Association of peripheral cytokine levels with cerebral structural abnormalities in schizophrenia.
[31525445] Significance of peripheral mononuclear cells producing interferon-γ in response to insulin B:9-23-related peptides in subtypes of type 1 diabetes.
[31522446] In Vitro Evaluation of CMV Specific CD8+T Cells Function in CMV+ Colorectal Cancer Patients Compared to Healthy Controls.
[31522433] Alteration of Serum Levels of Cytokines in Schizophrenic Patients before and after Treatment with Risperidone.
[31522092] An interferon-gamma release assay for the diagnosis of the Mycobacterium bovis infection in white rhinoceros (Ceratotherium simum).