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Keratin, type II cytoskeletal 72 (Cytokeratin-72) (CK-72) (Keratin-72) (K72) (Type II inner root sheath-specific keratin-K6irs2) (Type-II keratin Kb35)

 K2C72_RAT               Reviewed;         520 AA.
Q6IG04;
15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
15-JAN-2008, sequence version 2.
26-FEB-2020, entry version 104.
RecName: Full=Keratin, type II cytoskeletal 72;
AltName: Full=Cytokeratin-72;
Short=CK-72;
AltName: Full=Keratin-72;
Short=K72;
AltName: Full=Type II inner root sheath-specific keratin-K6irs2;
AltName: Full=Type-II keratin Kb35;
Name=Krt72; Synonyms=Kb35;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Brown Norway;
PubMed=15057822; DOI=10.1038/nature02426;
Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J.,
Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G.,
Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G.,
Morgan M., Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G.,
Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S.,
Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T.,
Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D.,
Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L.,
Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D.,
Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M.,
Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C.,
Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J.,
Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H.,
Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X.,
Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q.,
Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P.,
Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A.,
Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C.,
Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J.,
Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J.,
Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F.,
Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A.,
Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A.,
Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J.,
Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E.,
Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M.,
Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C.,
Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L.,
Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W.,
Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y.,
Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V.,
Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M.,
Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S.,
Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B.,
Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R.,
Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J.,
Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D.,
Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S.,
Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S.,
Mockrin S., Collins F.S.;
"Genome sequence of the Brown Norway rat yields insights into mammalian
evolution.";
Nature 428:493-521(2004).
[2]
IDENTIFICATION.
PubMed=15085952; DOI=10.1078/0171-9335-00354;
Hesse M., Zimek A., Weber K., Magin T.M.;
"Comprehensive analysis of keratin gene clusters in humans and rodents.";
Eur. J. Cell Biol. 83:19-26(2004).
-!- FUNCTION: Has a role in hair formation. Specific component of keratin
intermediate filaments in the inner root sheath (IRS) of the hair
follicle (By similarity). {ECO:0000250}.
-!- SUBUNIT: Heterotetramer of two type I and two type II keratins.
-!- MISCELLANEOUS: There are two types of cytoskeletal and microfibrillar
keratin, I (acidic) and II (neutral to basic) (40-55 and 56-70 kDa,
respectively).
-!- SIMILARITY: Belongs to the intermediate filament family.
{ECO:0000255|PROSITE-ProRule:PRU01188}.
-!- SEQUENCE CAUTION:
Sequence=DAA02226.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
---------------------------------------------------------------------------
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
Distributed under the Creative Commons Attribution (CC BY 4.0) License
---------------------------------------------------------------------------
EMBL; AABR03055962; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BK003981; DAA02226.1; ALT_SEQ; mRNA.
RefSeq; NP_001008809.1; NM_001008809.1.
RefSeq; XP_017450521.1; XM_017595032.1.
SMR; Q6IG04; -.
STRING; 10116.ENSRNOP00000035371; -.
iPTMnet; Q6IG04; -.
PhosphoSitePlus; Q6IG04; -.
jPOST; Q6IG04; -.
PaxDb; Q6IG04; -.
PRIDE; Q6IG04; -.
Ensembl; ENSRNOT00000038105; ENSRNOP00000035371; ENSRNOG00000030876.
GeneID; 406227; -.
KEGG; rno:406227; -.
UCSC; RGD:1303216; rat.
CTD; 140807; -.
RGD; 1303216; Krt72.
eggNOG; ENOG410IQKP; Eukaryota.
eggNOG; ENOG4111AD7; LUCA.
GeneTree; ENSGT00940000162105; -.
HOGENOM; CLU_012560_6_1_1; -.
InParanoid; Q6IG04; -.
KO; K07605; -.
OrthoDB; 671547at2759; -.
PhylomeDB; Q6IG04; -.
TreeFam; TF317854; -.
Reactome; R-RNO-6805567; Keratinization.
Reactome; R-RNO-6809371; Formation of the cornified envelope.
PRO; PR:Q6IG04; -.
Proteomes; UP000002494; Chromosome 7.
Bgee; ENSRNOG00000030876; Expressed in heart and 2 other tissues.
ExpressionAtlas; Q6IG04; baseline.
GO; GO:0045095; C:keratin filament; IEA:InterPro.
Gene3D; 1.20.5.1160; -; 1.
InterPro; IPR018039; IF_conserved.
InterPro; IPR039008; IF_rod_dom.
InterPro; IPR042180; IF_rod_dom_coil1B.
InterPro; IPR032444; Keratin_2_head.
InterPro; IPR003054; Keratin_II.
Pfam; PF00038; Filament; 1.
Pfam; PF16208; Keratin_2_head; 1.
PRINTS; PR01276; TYPE2KERATIN.
SMART; SM01391; Filament; 1.
PROSITE; PS00226; IF_ROD_1; 1.
PROSITE; PS51842; IF_ROD_2; 1.
3: Inferred from homology;
Coiled coil; Intermediate filament; Keratin; Reference proteome.
CHAIN 1..520
/note="Keratin, type II cytoskeletal 72"
/id="PRO_0000314879"
DOMAIN 134..447
/note="IF rod"
/evidence="ECO:0000255|PROSITE-ProRule:PRU01188"
REGION 1..133
/note="Head"
REGION 134..169
/note="Coil 1A"
REGION 170..188
/note="Linker 1"
REGION 189..280
/note="Coil 1B"
REGION 281..304
/note="Linker 12"
REGION 305..443
/note="Coil 2"
REGION 444..520
/note="Tail"
COMPBIAS 10..105
/note="Gly-rich"
SITE 385
/note="Stutter"
SEQUENCE 520 AA; 56851 MW; 3A7B068F826DC968 CRC64;
MSRQLTLYPG AERLGFSGCS AVISGRFSGS HASVRAGVKG AAFGSRSLFC VGGGRRLALS
SGGRSGGFTL GHGGASGGRP GGFVGTVFGS AGLGPTCPSV CPPGGIPQVV VNKSLLAPLN
VELDPEIQKV RAQEREQIKA LNNKFASFID KVRFLEQQNQ VLETKWELLQ QLDQNNSRRS
LEPVHESYIS NLQKQLEILS GDRVRLDSEL RNMREVVEDC KKRYEVEINR RTAAENEFVV
LKKDVDAAYM NKVELQAKVD SMTDDIKFFK VLFEGEIAQM QSHISDTSVI LSMDNNRQLD
LDSILAEVRA QYEEIAVKSK AETENMYQCK IQELQATAGQ HGDDLKLTKS EITEINRLIQ
RIHSEIGNMK KQCSNLETAI ADAEQRGDCA LKDARAKLDQ LEGVLQQSKE ELARMLREHQ
ELMNVKLALD MEIATYRKLL ESEESRMAGE YPSSVSISVV SSTNAGPGGA GFSVGFGASS
NYNYRPLALE VKTKGSCGSE LKDPPAKTSA SSCVSKKASR


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Related Genes :
[KRT72 K6IRS2 KB35 KRT6 KRT6IRS2] Keratin, type II cytoskeletal 72 (Cytokeratin-72) (CK-72) (Keratin-72) (K72) (Type II inner root sheath-specific keratin-K6irs2) (Type-II keratin Kb35)
[Krt71 K6irs1 Kb34 Krt2-6g Krt6g] Keratin, type II cytoskeletal 71 (Cytokeratin-6G) (CK-6G) (Cytokeratin-71) (CK-71) (Keratin-6G) (K6G) (Keratin-71) (K71) (Type II inner root sheath-specific keratin-K6irs1) (mK6irs) (mK6irs1/Krt2-6g) (Type-II keratin Kb34)
[KRT74 K6IRS4 KB37 KRT5C KRT6IRS4] Keratin, type II cytoskeletal 74 (Cytokeratin-74) (CK-74) (Keratin-5c) (K5C) (Keratin-74) (K74) (Type II inner root sheath-specific keratin-K6irs4) (Type-II keratin Kb37)
[KRT71 K6IRS1 KB34 KRT6IRS1] Keratin, type II cytoskeletal 71 (Cytokeratin-71) (CK-71) (Keratin-71) (K71) (Type II inner root sheath-specific keratin-K6irs1) (Keratin 6 irs) (hK6irs) (hK6irs1) (Type-II keratin Kb34)
[KRT73 K6IRS3 KB36 KRT6IRS3] Keratin, type II cytoskeletal 73 (Cytokeratin-73) (CK-73) (Keratin-73) (K73) (Type II inner root sheath-specific keratin-K6irs3) (Type-II keratin Kb36)
[KRT14] Keratin, type I cytoskeletal 14 (Cytokeratin-14) (CK-14) (Keratin-14) (K14)
[KRT17] Keratin, type I cytoskeletal 17 (39.1) (Cytokeratin-17) (CK-17) (Keratin-17) (K17)
[KRT19] Keratin, type I cytoskeletal 19 (Cytokeratin-19) (CK-19) (Keratin-19) (K19)
[KRT18 CYK18 PIG46] Keratin, type I cytoskeletal 18 (Cell proliferation-inducing gene 46 protein) (Cytokeratin-18) (CK-18) (Keratin-18) (K18)
[KRT6C KRT6E] Keratin, type II cytoskeletal 6C (Cytokeratin-6C) (CK-6C) (Cytokeratin-6E) (CK-6E) (Keratin K6h) (Keratin-6C) (K6C) (Type-II keratin Kb12)
[KRT9] Keratin, type I cytoskeletal 9 (Cytokeratin-9) (CK-9) (Keratin-9) (K9)
[KRT1 KRTA] Keratin, type II cytoskeletal 1 (67 kDa cytokeratin) (Cytokeratin-1) (CK-1) (Hair alpha protein) (Keratin-1) (K1) (Type-II keratin Kb1)
[Krt6a Ker2 Krt2-6 Krt2-6a Krt6] Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK-6A) (Keratin-6-alpha) (mK6-alpha) (Keratin-6A) (K6A)
[KRT6B K6B KRTL1] Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK-6B) (Keratin-6B) (K6B) (Type-II keratin Kb10)
[KRT6A K6A KRT6D] Keratin, type II cytoskeletal 6A (Cytokeratin-6A) (CK-6A) (Cytokeratin-6D) (CK-6D) (Keratin-6A) (K6A) (Type-II keratin Kb6) (allergen Hom s 5)
[Krt18 Kerd Krt1-18] Keratin, type I cytoskeletal 18 (Cytokeratin endo B) (Keratin D) (Cytokeratin-18) (CK-18) (Keratin-18) (K18)
[KRT5] Keratin, type II cytoskeletal 5 (58 kDa cytokeratin) (Cytokeratin-5) (CK-5) (Keratin-5) (K5) (Type-II keratin Kb5)
[KRT16 KRT16A] Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16)
[KRT3] Keratin, type II cytoskeletal 3 (65 kDa cytokeratin) (Cytokeratin-3) (CK-3) (Keratin-3) (K3) (Type-II keratin Kb3)
[KRT79 K6L KB38 KRT6L] Keratin, type II cytoskeletal 79 (Cytokeratin-79) (CK-79) (Keratin-6-like) (Keratin-6L) (Keratin-79) (K79) (Type-II keratin Kb38)
[KRT10 KPP] Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10) (Keratin-10) (K10)
[KRT80 KB20] Keratin, type II cytoskeletal 80 (Cytokeratin-80) (CK-80) (Keratin-80) (K80) (Type-II keratin Kb20)
[Krt17 Krt1-17] Keratin, type I cytoskeletal 17 (Cytokeratin-17) (CK-17) (Keratin-17) (K17)
[Krt16 Krt1-16] Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16) (Keratin-16) (K16)
[Krt18 Krt1-18] Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18) (Keratin-18) (K18)
[KRT12] Keratin, type I cytoskeletal 12 (Cytokeratin-12) (CK-12) (Keratin-12) (K12)
[Krt17 Ka17] Keratin, type I cytoskeletal 17 (Cytokeratin-17) (CK-17) (Keratin-17) (K17) (Type I keratin Ka17)
[Krt12 Krt1-12 Krt1.12] Keratin, type I cytoskeletal 12 (Cytokeratin-12) (CK-12) (Keratin-12) (K12)
[KRT85 KRTHB5] Keratin, type II cuticular Hb5 (Hair keratin K2.12) (Keratin-85) (K85) (Type II hair keratin Hb5) (Type-II keratin Kb25)
[Krt6b K6-beta Krt2-6b] Keratin, type II cytoskeletal 6B (Cytokeratin-6B) (CK-6B) (Keratin-6-beta) (mK6-beta) (Keratin-6B) (K6B)

Bibliography :