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Olfactory receptor 1D2 (Olfactory receptor 17-4) (OR17-4) (Olfactory receptor OR17-6) (Olfactory receptor-like protein HGMP07E)

 OR1D2_HUMAN             Reviewed;         312 AA.
P34982; Q6IFL8; Q96RA4; Q9UM78;
01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
07-JUN-2005, sequence version 2.
13-FEB-2019, entry version 175.
RecName: Full=Olfactory receptor 1D2;
AltName: Full=Olfactory receptor 17-4;
Short=OR17-4;
AltName: Full=Olfactory receptor OR17-6;
AltName: Full=Olfactory receptor-like protein HGMP07E;
Name=OR1D2; Synonyms=OLFR1;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT GLN-25.
PubMed=8097991;
Schurmans S., Muscatelli F., Miot F., Mattei M.-G., Vassart G.,
Parmentier M.;
"The OLFR1 gene encoding the HGMP07E putative olfactory receptor maps
to the 17p13-->p12 region of the human genome and reveals an MspI
restriction fragment length polymorphism.";
Cytogenet. Cell Genet. 63:200-204(1993).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT GLN-25.
PubMed=10673334; DOI=10.1006/geno.1999.6030;
Glusman G., Sosinsky A., Ben-Asher E., Avidan N., Sonkin D., Bahar A.,
Rosenthal A., Clifton S., Roe B., Ferraz C., Demaille J.G., Lancet D.;
"Sequence, structure, and evolution of a complete human olfactory
receptor gene cluster.";
Genomics 63:227-245(2000).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-214.
Ferraz C., Demaille J.G.;
"Sequence of cosmid ICRF105cF06137 of the human chromosome 17p13.3
olfactory receptor gene cluster.";
Submitted (APR-1996) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 68-282.
PubMed=12213199; DOI=10.1006/geno.2002.6830;
Fuchs T., Malecova B., Linhart C., Sharan R., Khen M., Herwig R.,
Shmulevich D., Elkon R., Steinfath M., O'Brien J.K., Radelof U.,
Lehrach H., Lancet D., Shamir R.;
"DEFOG: a practical scheme for deciphering families of genes.";
Genomics 80:295-302(2002).
[6]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 118-282.
PubMed=8004088; DOI=10.1093/hmg/3.2.229;
Ben-Arie N., Lancet D., Taylor C., Khen M., Walker N., Ledbetter D.H.,
Carrozzo R., Patel K., Sheer D., Lehrach H., North M.A.;
"Olfactory receptor gene cluster on human chromosome 17: possible
duplication of an ancestral receptor repertoire.";
Hum. Mol. Genet. 3:229-235(1994).
[7]
FUNCTION IN SPERM CHEMOTAXIS, AND TISSUE SPECIFICITY.
PubMed=12663925; DOI=10.1126/science.1080376;
Spehr M., Gisselmann G., Poplawski A., Riffell J.A., Wetzel C.H.,
Zimmer R.K., Hatt H.;
"Identification of a testicular odorant receptor mediating human sperm
chemotaxis.";
Science 299:2054-2058(2003).
[8]
FUNCTION IN OLFACTORY RECEPTION, AND TISSUE SPECIFICITY.
PubMed=15458659; DOI=10.1016/j.cub.2004.09.034;
Spehr M., Schwane K., Heilmann S., Gisselmann G., Hummel T., Hatt H.;
"Dual capacity of a human olfactory receptor.";
Curr. Biol. 14:R832-R833(2004).
[9]
IDENTIFICATION.
PubMed=14983052; DOI=10.1073/pnas.0307882100;
Malnic B., Godfrey P.A., Buck L.B.;
"The human olfactory receptor gene family.";
Proc. Natl. Acad. Sci. U.S.A. 101:2584-2589(2004).
[10]
ERRATUM.
Malnic B., Godfrey P.A., Buck L.B.;
Proc. Natl. Acad. Sci. U.S.A. 101:7205-7205(2004).
[11]
FUNCTION, TISSUE SPECIFICITY, SUBCELLULAR LOCATION, AND MUTAGENESIS OF
SER-230; SER-232; SER-239 AND THR-312.
PubMed=16820410; DOI=10.1242/jcs.03046;
Neuhaus E.M., Mashukova A., Barbour J., Wolters D., Hatt H.;
"Novel function of beta-arrestin2 in the nucleus of mature
spermatozoa.";
J. Cell Sci. 119:3047-3056(2006).
-!- FUNCTION: Odorant receptor which may be involved in sperm
chemotaxis. Bourgeonal is a strong chemoattractant for sperm in
vitro and is shown to be a strong agonist for OR1D2 in vitro. May
also function in olfactory reception.
{ECO:0000269|PubMed:12663925, ECO:0000269|PubMed:15458659,
ECO:0000269|PubMed:16820410}.
-!- INTERACTION:
Self; NbExp=3; IntAct=EBI-7590722, EBI-7590722;
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:16820410};
Multi-pass membrane protein {ECO:0000269|PubMed:16820410}. Note=In
spermatazoa is localized in the midpiece and is translocated to
the head region upon receptor stimulation with bourgeonal.
-!- TISSUE SPECIFICITY: Expressed in testis. Expressed in spermatozoa
(at protein level). Expressed in olfactory epithelium.
{ECO:0000269|PubMed:12663925, ECO:0000269|PubMed:15458659,
ECO:0000269|PubMed:16820410}.
-!- SIMILARITY: Belongs to the G-protein coupled receptor 1 family.
{ECO:0000255|PROSITE-ProRule:PRU00521}.
-!- WEB RESOURCE: Name=Protein Spotlight; Note=Love at first smell
- Issue 115 of March 2010;
URL="https://web.expasy.org/spotlight/back_issues/115";
-!- WEB RESOURCE: Name=Human Olfactory Receptor Data Exploratorium
(HORDE);
URL="http://genome.weizmann.ac.il/horde/card/index/symbol:OR1D2";
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; X65857; CAA46687.1; -; Genomic_DNA.
EMBL; AF087917; AAF37310.1; -; Genomic_DNA.
EMBL; BC069552; AAH69552.1; -; mRNA.
EMBL; BC106735; AAI06736.1; -; mRNA.
EMBL; BC106736; AAI06737.1; -; mRNA.
EMBL; U53583; AAC99554.1; -; Genomic_DNA.
EMBL; AF399535; AAK95020.1; -; Genomic_DNA.
EMBL; U04678; AAA18343.1; -; Genomic_DNA.
EMBL; BK004244; DAA04642.1; -; Genomic_DNA.
CCDS; CCDS11019.1; -.
PIR; A48413; A48413.
PIR; I38471; I38471.
RefSeq; NP_002539.2; NM_002548.2.
UniGene; Hs.532771; -.
ProteinModelPortal; P34982; -.
DIP; DIP-46308N; -.
IntAct; P34982; 1.
MINT; P34982; -.
STRING; 9606.ENSP00000327585; -.
iPTMnet; P34982; -.
PhosphoSitePlus; P34982; -.
BioMuta; OR1D2; -.
DMDM; 67477446; -.
PaxDb; P34982; -.
PRIDE; P34982; -.
ProteomicsDB; 54966; -.
Ensembl; ENST00000331459; ENSP00000327585; ENSG00000184166.
Ensembl; ENST00000641064; ENSP00000493077; ENSG00000184166.
Ensembl; ENST00000641833; ENSP00000493103; ENSG00000184166.
GeneID; 4991; -.
KEGG; hsa:4991; -.
UCSC; uc010vrb.2; human.
CTD; 4991; -.
EuPathDB; HostDB:ENSG00000184166.1; -.
GeneCards; OR1D2; -.
HGNC; HGNC:8183; OR1D2.
MIM; 164342; gene.
neXtProt; NX_P34982; -.
OpenTargets; ENSG00000184166; -.
PharmGKB; PA32057; -.
eggNOG; ENOG410IH29; Eukaryota.
eggNOG; ENOG41116CF; LUCA.
GeneTree; ENSGT00940000160386; -.
HOGENOM; HOG000041364; -.
HOVERGEN; HBG017625; -.
InParanoid; P34982; -.
KO; K04257; -.
OMA; CMVYLKP; -.
OrthoDB; 971471at2759; -.
PhylomeDB; P34982; -.
TreeFam; TF337210; -.
Reactome; R-HSA-381753; Olfactory Signaling Pathway.
GeneWiki; OR1D2; -.
GenomeRNAi; 4991; -.
PRO; PR:P34982; -.
Proteomes; UP000005640; Chromosome 17.
Bgee; ENSG00000184166; Expressed in 10 organ(s), highest expression level in muscle tissue.
ExpressionAtlas; P34982; baseline and differential.
Genevisible; P34982; HS.
GO; GO:0005887; C:integral component of plasma membrane; TAS:ProtInc.
GO; GO:0005886; C:plasma membrane; TAS:Reactome.
GO; GO:0004930; F:G protein-coupled receptor activity; TAS:ProtInc.
GO; GO:0042802; F:identical protein binding; IPI:IntAct.
GO; GO:0004984; F:olfactory receptor activity; IDA:UniProtKB.
GO; GO:0006935; P:chemotaxis; IEA:UniProtKB-KW.
GO; GO:0007186; P:G protein-coupled receptor signaling pathway; IDA:UniProtKB.
GO; GO:0007608; P:sensory perception of smell; TAS:ProtInc.
GO; GO:0007338; P:single fertilization; IEA:UniProtKB-KW.
InterPro; IPR000276; GPCR_Rhodpsn.
InterPro; IPR017452; GPCR_Rhodpsn_7TM.
InterPro; IPR000725; Olfact_rcpt.
Pfam; PF13853; 7tm_4; 1.
PRINTS; PR00237; GPCRRHODOPSN.
PRINTS; PR00245; OLFACTORYR.
PROSITE; PS00237; G_PROTEIN_RECEP_F1_1; 1.
PROSITE; PS50262; G_PROTEIN_RECEP_F1_2; 1.
1: Evidence at protein level;
Cell membrane; Chemotaxis; Complete proteome; Disulfide bond;
Fertilization; G-protein coupled receptor; Glycoprotein; Membrane;
Olfaction; Polymorphism; Receptor; Reference proteome;
Sensory transduction; Transducer; Transmembrane; Transmembrane helix.
CHAIN 1 312 Olfactory receptor 1D2.
/FTId=PRO_0000150418.
TOPO_DOM 1 25 Extracellular. {ECO:0000255}.
TRANSMEM 26 49 Helical; Name=1. {ECO:0000255}.
TOPO_DOM 50 57 Cytoplasmic. {ECO:0000255}.
TRANSMEM 58 79 Helical; Name=2. {ECO:0000255}.
TOPO_DOM 80 100 Extracellular. {ECO:0000255}.
TRANSMEM 101 120 Helical; Name=3. {ECO:0000255}.
TOPO_DOM 121 139 Cytoplasmic. {ECO:0000255}.
TRANSMEM 140 158 Helical; Name=4. {ECO:0000255}.
TOPO_DOM 159 196 Extracellular. {ECO:0000255}.
TRANSMEM 197 219 Helical; Name=5. {ECO:0000255}.
TOPO_DOM 220 236 Cytoplasmic. {ECO:0000255}.
TRANSMEM 237 259 Helical; Name=6. {ECO:0000255}.
TOPO_DOM 260 271 Extracellular. {ECO:0000255}.
TRANSMEM 272 291 Helical; Name=7. {ECO:0000255}.
TOPO_DOM 292 312 Cytoplasmic. {ECO:0000255}.
CARBOHYD 5 5 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 195 195 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 97 189 {ECO:0000255|PROSITE-ProRule:PRU00521}.
VARIANT 25 25 R -> Q (in dbSNP:rs769423).
{ECO:0000269|PubMed:10673334,
ECO:0000269|PubMed:8097991}.
/FTId=VAR_019630.
VARIANT 31 31 F -> Y (in dbSNP:rs9916628).
/FTId=VAR_057534.
VARIANT 214 214 V -> M (in dbSNP:rs55803944).
/FTId=VAR_062008.
VARIANT 240 240 T -> I (in dbSNP:rs4300683).
/FTId=VAR_057535.
MUTAGEN 230 230 S->A: Abolishes nuclear translocation of
ARRB2; when associated with A-232 and A-
239. {ECO:0000269|PubMed:16820410}.
MUTAGEN 232 232 S->A: Abolishes nuclear translocation of
ARRB2; when associated with A-230 and A-
239. {ECO:0000269|PubMed:16820410}.
MUTAGEN 239 239 S->A: Abolishes nuclear translocation of
ARRB2; when associated with A-230 and A-
232. {ECO:0000269|PubMed:16820410}.
MUTAGEN 312 312 T->A: Abolishes nuclear translocation of
ARRB2. {ECO:0000269|PubMed:16820410}.
SEQUENCE 312 AA; 35240 MW; 71B05367C0AA135B CRC64;
MDGGNQSEGS EFLLLGMSES PEQQRILFWM FLSMYLVTVV GNVLIILAIS SDSRLHTPVY
FFLANLSFTD LFFVTNTIPK MLVNLQSHNK AISYAGCLTQ LYFLVSLVAL DNLILAVMAY
DRYVAICCPL HYTTAMSPKL CILLLSLCWV LSVLYGLIHT LLMTRVTFCG SRKIHYIFCE
MYVLLRMACS NIQINHTVLI ATGCFIFLIP FGFVIISYVL IIRAILRIPS VSKKYKAFST
CASHLGAVSL FYGTLCMVYL KPLHTYSVKD SVATVMYAVV TPMMNPFIYS LRNKDMHGAL
GRLLDKHFKR LT


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Pathways :
WP2272: Pathogenic Escherichia coli infection
WP2292: Chemokine signaling pathway
WP1004: Kit Receptor Signaling Pathway
WP1011: T Cell Receptor Signaling Pathway
WP1014: Androgen receptor signaling pathway
WP1025: B Cell Receptor Signaling Pathway
WP1045: TGF-beta Receptor Signaling Pathway
WP1046: Signaling of Hepatocyte Growth Factor Receptor
WP1067: Toll-like receptor signaling pathway
WP1112: EPO Receptor Signaling
WP1121: Kit Receptor Signaling Pathway
WP1130: T Cell Receptor Signaling Pathway
WP1133: Androgen receptor signaling pathway
WP1144: B Cell Receptor Signaling Pathway
WP1161: TGF-beta Receptor Signaling Pathway
WP1162: Signaling of Hepatocyte Growth Factor Receptor
WP1183: Toll-like receptor signaling pathway
WP1206: Signaling of Hepatocyte Growth Factor Receptor
WP1235: Signaling of Hepatocyte Growth Factor Receptor
WP1249: EPO Receptor Signaling
WP1271: Toll-like receptor signaling pathway
WP1284: EPO Receptor Signaling
WP1309: Toll-like receptor signaling pathway
WP1336: EPO Receptor Signaling
WP1341: Kit Receptor Signaling Pathway

Related Genes :
[OR1D2 OLFR1] Olfactory receptor 1D2 (Olfactory receptor 17-4) (OR17-4) (Olfactory receptor OR17-6) (Olfactory receptor-like protein HGMP07E)
[OR3A3 OR3A6 OR3A7 OR3A8P] Olfactory receptor 3A3 (Olfactory receptor 17-201) (OR17-201) (Olfactory receptor 3A6) (Olfactory receptor 3A7) (Olfactory receptor 3A8) (Olfactory receptor OR17-22)
[OR1E1 OR1E5 OR1E6 OR1E9P] Olfactory receptor 1E1 (Olfactory receptor 13-66) (OR13-66) (Olfactory receptor 17-2/17-32) (OR17-2) (OR17-32) (Olfactory receptor 1E5) (Olfactory receptor 1E6) (Olfactory receptor 5-85) (OR5-85) (Olfactory receptor OR17-18) (Olfactory receptor-like protein HGMP07I)
[OR1E2 OR1E4] Olfactory receptor 1E2 (Olfactory receptor 17-93/17-135/17-136) (OR17-135) (OR17-136) (OR17-93) (Olfactory receptor 1E4)
[OR3A2 OLFRA04] Olfactory receptor 3A2 (Olfactory receptor 17-228) (OR17-228) (Olfactory receptor OR17-14)
[OR3A4P OR3A4 OR3A5P] Putative olfactory receptor 3A4 (Olfactory receptor 17-24) (OR17-24) (Olfactory receptor 3A5)
[OR1A2] Olfactory receptor 1A2 (Olfactory receptor 17-6) (OR17-6) (Olfactory receptor OR17-10)
[OR1G1 OR1G2] Olfactory receptor 1G1 (Olfactory receptor 17-209) (OR17-209) (Olfactory receptor 1G2) (Olfactory receptor OR17-8)
[OR3A1 OLFRA03] Olfactory receptor 3A1 (Olfactory receptor 17-40) (OR17-40) (Olfactory receptor OR17-15)
[Akr1c21] Aldo-keto reductase family 1 member C21 (EC 1.1.1.-) (17-alpha-hydroxysteroid dehydrogenase) (17-alpha-HSD) (3(or 17)-alpha-hydroxysteroid dehydrogenase) (EC 1.1.1.209) (3-alpha-hydroxysteroid dehydrogenase) (Dihydrodiol dehydrogenase type 1) (DD1) (Dihydrodiol dehydrogenase type 3) (DD3)
[OR1P1 OR1P1P] Olfactory receptor 1P1 (Olfactory receptor 17-208) (OR17-208) (Olfactory receptor OR17-9)
[OR1E3 OR1E3P] Olfactory receptor 1E3 (Olfactory receptor 17-210) (OR17-210) (Olfactory receptor OR17-7)
[OR1A1] Olfactory receptor 1A1 (Olfactory receptor 17-7) (OR17-7) (Olfactory receptor OR17-11)
[OR1F1 OLFMF OR1F10 OR1F4 OR1F5 OR1F6 OR1F7 OR1F8 OR1F9] Olfactory receptor 1F1 (Olfactory receptor 16-35) (OR16-35) (Olfactory receptor 1F10) (Olfactory receptor 1F4) (Olfactory receptor 1F5) (Olfactory receptor 1F6) (Olfactory receptor 1F7) (Olfactory receptor 1F8) (Olfactory receptor 1F9) (Olfactory receptor OR16-4)
[OR1D4] Olfactory receptor 1D4 (Olfactory receptor 17-30) (OR17-30)
[Or51e2 Mol2.3 Olfr78 Psgr] Olfactory receptor 51E2 (Olfactory receptor 78)
[OR7D4 OR7D4P] Olfactory receptor 7D4 (OR19-B) (Odorant receptor family subfamily D member 4RT) (Olfactory receptor OR19-7)
[OR2A4 OR2A10] Olfactory receptor 2A4 (Olfactory receptor 2A10) (Olfactory receptor OR6-37)
[OR4D2] Olfactory receptor 4D2 (B-lymphocyte membrane protein BC2009) (Olfactory receptor OR17-24)
[NR1D2] Nuclear receptor subfamily 1 group D member 2 (Orphan nuclear hormone receptor BD73) (Rev-erb alpha-related receptor) (RVR) (Rev-erb-beta) (V-erbA-related protein 1-related) (EAR-1R)
[Nr1d2] Nuclear receptor subfamily 1 group D member 2 (Orphan nuclear receptor RVR) (Rev-erb-beta)
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[OR1D5] Olfactory receptor 1D5 (Olfactory receptor 17-31) (OR17-31)
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[OR10C1 OR10C2] Olfactory receptor 10C1 (Hs6M1-17) (Olfactory receptor 10C2)
[Olfr15 Mor256-17] Olfactory receptor 15 (Odorant receptor OR3) (Olfactory receptor 256-17)
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[OR2B6 OR2B1 OR2B1P OR2B5 OR2B6P] Olfactory receptor 2B6 (Hs6M1-32) (Olfactory receptor 2B1) (Olfactory receptor 2B5) (Olfactory receptor 5-40) (OR5-40) (Olfactory receptor 6-31) (OR6-31) (Olfactory receptor OR6-4)
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]

Bibliography :