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Oxysterols receptor LXR-beta (Liver X receptor beta) (Nuclear receptor subfamily 1 group H member 2) (Orphan nuclear receptor OR-1) (Ubiquitously-expressed nuclear receptor) (UR)

 NR1H2_RAT               Reviewed;         446 AA.
Q62755; Q62694;
30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
01-NOV-1996, sequence version 1.
16-OCT-2019, entry version 163.
RecName: Full=Oxysterols receptor LXR-beta;
AltName: Full=Liver X receptor beta;
AltName: Full=Nuclear receptor subfamily 1 group H member 2;
AltName: Full=Orphan nuclear receptor OR-1;
AltName: Full=Ubiquitously-expressed nuclear receptor;
Short=UR;
Name=Nr1h2; Synonyms=Lxrb;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley; TISSUE=Liver;
PubMed=7892230; DOI=10.1073/pnas.92.6.2096;
Teboul M., Enmark E., Li Q., Wikstroem A.-C., Pelto-Huikko M.,
Gustafsson J.-A.;
"OR-1, a member of the nuclear receptor superfamily that interacts
with the 9-cis-retinoic acid receptor.";
Proc. Natl. Acad. Sci. U.S.A. 92:2096-2100(1995).
[2]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley; TISSUE=Vagina;
PubMed=7971966; DOI=10.1073/pnas.91.23.10809;
Song C., Kokontis J.M., Hiipakka R.A., Liao S.;
"Ubiquitous receptor: a receptor that modulates gene activation by
retinoic acid and thyroid hormone receptors.";
Proc. Natl. Acad. Sci. U.S.A. 91:10809-10813(1994).
-!- FUNCTION: Nuclear receptor that exhibits a ligand-dependent
transcriptional activation activity (By similarity). Binds
preferentially to double-stranded oligonucleotide direct repeats
having the consensus half-site sequence 5'-AGGTCA-3' and 4-nt
spacing (DR-4). Regulates cholesterol uptake through MYLIP-
dependent ubiquitination of LDLR, VLDLR and LRP8; DLDLR and LRP8.
Interplays functionally with RORA for the regulation of genes
involved in liver metabolism (By similarity). Plays an anti-
inflammatory role during the hepatic acute phase response by
acting as a corepressor: inhibits the hepatic acute phase response
by preventing dissociation of the N-Cor corepressor complex (By
similarity). {ECO:0000250|UniProtKB:P55055,
ECO:0000250|UniProtKB:Q60644}.
-!- SUBUNIT: Forms a heterodimer with RXR. Interacts with CCAR2 (via
N-terminus) in a ligand-independent manner. Interacts (when
sumoylated) with GPS2; interaction with GPS2 onto hepatic acute
phase protein promoters prevents N-Cor corepressor complex
dissociation. {ECO:0000250|UniProtKB:P55055}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-
ProRule:PRU00407}.
-!- PTM: Sumoylated by SUMO2 at Lys-395 and Lys-433 during the hepatic
acute phase response, leading to promote interaction with GPS2 and
prevent N-Cor corepressor complex dissociation.
{ECO:0000250|UniProtKB:P55055}.
-!- SIMILARITY: Belongs to the nuclear hormone receptor family. NR1
subfamily. {ECO:0000305}.
-----------------------------------------------------------------------
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EMBL; U20389; AAA69522.1; -; mRNA.
EMBL; U14533; AAA52361.1; -; mRNA.
PIR; I59354; I59354.
RefSeq; NP_113814.1; NM_031626.1.
SMR; Q62755; -.
STRING; 10116.ENSRNOP00000026862; -.
ChEMBL; CHEMBL4105785; -.
PhosphoSitePlus; Q62755; -.
PaxDb; Q62755; -.
PRIDE; Q62755; -.
Ensembl; ENSRNOT00000026862; ENSRNOP00000026862; ENSRNOG00000019812.
GeneID; 58851; -.
KEGG; rno:58851; -.
UCSC; RGD:61906; rat.
CTD; 7376; -.
RGD; 61906; Nr1h2.
eggNOG; KOG3575; Eukaryota.
eggNOG; ENOG410XRZC; LUCA.
GeneTree; ENSGT00940000161465; -.
HOGENOM; HOG000220845; -.
InParanoid; Q62755; -.
KO; K08535; -.
OMA; DELCRVC; -.
OrthoDB; 1137281at2759; -.
PhylomeDB; Q62755; -.
TreeFam; TF352167; -.
Reactome; R-RNO-383280; Nuclear Receptor transcription pathway.
Reactome; R-RNO-4090294; SUMOylation of intracellular receptors.
Reactome; R-RNO-8866427; VLDLR internalisation and degradation.
PRO; PR:Q62755; -.
Proteomes; UP000002494; Chromosome 1.
Bgee; ENSRNOG00000019812; Expressed in 10 organ(s), highest expression level in adult mammalian kidney.
Genevisible; Q62755; RN.
GO; GO:0005737; C:cytoplasm; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0090575; C:RNA polymerase II transcription factor complex; IBA:GO_Central.
GO; GO:0034191; F:apolipoprotein A-I receptor binding; IEA:Ensembl.
GO; GO:0051117; F:ATPase binding; IEA:Ensembl.
GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IDA:NTNU_SB.
GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IDA:RGD.
GO; GO:0004879; F:nuclear receptor activity; IEA:Ensembl.
GO; GO:0030374; F:nuclear receptor transcription coactivator activity; IBA:GO_Central.
GO; GO:0046965; F:retinoid X receptor binding; IDA:RGD.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IMP:NTNU_SB.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0038023; F:signaling receptor activity; IBA:GO_Central.
GO; GO:0003707; F:steroid hormone receptor activity; IEA:InterPro.
GO; GO:0008134; F:transcription factor binding; IBA:GO_Central.
GO; GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
GO; GO:0044255; P:cellular lipid metabolic process; IEA:Ensembl.
GO; GO:0071222; P:cellular response to lipopolysaccharide; IBA:GO_Central.
GO; GO:0042632; P:cholesterol homeostasis; ISS:UniProtKB.
GO; GO:0055088; P:lipid homeostasis; IBA:GO_Central.
GO; GO:0006629; P:lipid metabolic process; IBA:GO_Central.
GO; GO:0007275; P:multicellular organism development; IBA:GO_Central.
GO; GO:0010887; P:negative regulation of cholesterol storage; IEA:Ensembl.
GO; GO:0120163; P:negative regulation of cold-induced thermogenesis; ISS:YuBioLab.
GO; GO:0010629; P:negative regulation of gene expression; IDA:RGD.
GO; GO:0032369; P:negative regulation of lipid transport; IEA:Ensembl.
GO; GO:0048550; P:negative regulation of pinocytosis; IEA:Ensembl.
GO; GO:0045861; P:negative regulation of proteolysis; IEA:Ensembl.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IBA:GO_Central.
GO; GO:0032270; P:positive regulation of cellular protein metabolic process; IEA:Ensembl.
GO; GO:0010875; P:positive regulation of cholesterol efflux; IEA:Ensembl.
GO; GO:0045723; P:positive regulation of fatty acid biosynthetic process; IEA:Ensembl.
GO; GO:0010628; P:positive regulation of gene expression; IDA:RGD.
GO; GO:0090108; P:positive regulation of high-density lipoprotein particle assembly; IEA:Ensembl.
GO; GO:0010884; P:positive regulation of lipid storage; IEA:Ensembl.
GO; GO:0051006; P:positive regulation of lipoprotein lipase activity; IEA:Ensembl.
GO; GO:0090187; P:positive regulation of pancreatic juice secretion; IEA:Ensembl.
GO; GO:0090340; P:positive regulation of secretion of lysosomal enzymes; IEA:Ensembl.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
GO; GO:0010867; P:positive regulation of triglyceride biosynthetic process; IEA:Ensembl.
GO; GO:0048384; P:retinoic acid receptor signaling pathway; IDA:RGD.
Gene3D; 1.10.565.10; -; 1.
Gene3D; 3.30.50.10; -; 1.
InterPro; IPR023257; Liver_X_rcpt.
InterPro; IPR035500; NHR-like_dom_sf.
InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
InterPro; IPR001723; Nuclear_hrmn_rcpt.
InterPro; IPR001628; Znf_hrmn_rcpt.
InterPro; IPR013088; Znf_NHR/GATA.
Pfam; PF00104; Hormone_recep; 1.
Pfam; PF00105; zf-C4; 1.
PRINTS; PR02034; LIVERXRECPTR.
PRINTS; PR00398; STRDHORMONER.
PRINTS; PR00047; STROIDFINGER.
SMART; SM00430; HOLI; 1.
SMART; SM00399; ZnF_C4; 1.
SUPFAM; SSF48508; SSF48508; 1.
PROSITE; PS51843; NR_LBD; 1.
PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
2: Evidence at transcript level;
Activator; Complete proteome; DNA-binding; Isopeptide bond;
Metal-binding; Nucleus; Receptor; Reference proteome; Transcription;
Transcription regulation; Ubl conjugation; Zinc; Zinc-finger.
CHAIN 1 446 Oxysterols receptor LXR-beta.
/FTId=PRO_0000053534.
DOMAIN 208 446 NR LBD. {ECO:0000255|PROSITE-
ProRule:PRU01189}.
DNA_BIND 75 152 Nuclear receptor. {ECO:0000255|PROSITE-
ProRule:PRU00407}.
ZN_FING 78 98 NR C4-type. {ECO:0000255|PROSITE-
ProRule:PRU00407}.
ZN_FING 116 140 NR C4-type. {ECO:0000255|PROSITE-
ProRule:PRU00407}.
REGION 1 76 Transactivation AF-1; required for
ligand-independent transactivation
function. {ECO:0000250|UniProtKB:P55055}.
REGION 205 446 Transactivation AF-2; required for
ligand-dependent transactivation
function; mediates interaction with
CCAR2. {ECO:0000250|UniProtKB:P55055}.
COMPBIAS 162 168 Poly-Gln.
COMPBIAS 169 172 Poly-Pro.
CROSSLNK 395 395 Glycyl lysine isopeptide (Lys-Gly)
(interchain with G-Cter in SUMO2).
{ECO:0000250|UniProtKB:P55055}.
CROSSLNK 433 433 Glycyl lysine isopeptide (Lys-Gly)
(interchain with G-Cter in SUMO2).
{ECO:0000250|UniProtKB:P55055}.
CONFLICT 33 33 G -> V (in Ref. 2; AAA52361).
{ECO:0000305}.
CONFLICT 52 54 Missing (in Ref. 2; AAA52361).
{ECO:0000305}.
CONFLICT 219 219 A -> V (in Ref. 2; AAA52361).
{ECO:0000305}.
SEQUENCE 446 AA; 49736 MW; 13DF6DC2F0F5FA4D CRC64;
MSSPTSSLDT PLPGNGSPQP STSSTSPTIK EEGQETDPPP GSEGSSSAYI VVILEPEDEP
ERKRKKGPAP KMLGHELCRV CGDKASGFHY NVLSCEGCKG FFRRSVVHGG AGRYACRGSG
TCQMDAFMRR KCQLCRLRKC KEAGMREQCV LSEEQIRKKK IQKQQQQQPP PPTEPASGSS
ARPAASPGTS EASSQGSGEG EGIQLTAAQE LMIQQLVAAQ LQCNKRSFSD QPKVTPWPLG
ADPQSRDARQ QRFAHFTELA IISVQEIVDF AKQVPGFLQL GREDQIALLK ASTIEIMLLE
TARRYNHETE CITFLKDFTY SKDDFHRAGL QVEFINPIFE FSRAMRRLGL DDAEYALLIA
INIFSADRPN VQEPSRVEAL QQPYVEALLS YTRIKRPQDQ LRFPRMLMKL VSLRTLSSVH
SEQVFALRLQ DKKLPPLLSE IWDVHE


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Related Genes :
[Nr1h2 Lxrb] Oxysterols receptor LXR-beta (Liver X receptor beta) (Nuclear receptor subfamily 1 group H member 2) (Orphan nuclear receptor OR-1) (Ubiquitously-expressed nuclear receptor) (UR)
[Nr2c1 Tr2 Tr2-11] Nuclear receptor subfamily 2 group C member 1 (Orphan nuclear receptor TR2) (Testicular receptor 2) (mTR2)
[Rora Nr1f1 Rzra] Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha) (Nuclear receptor subfamily 1 group F member 1) (RAR-related orphan receptor A) (Retinoid-related orphan receptor-alpha)
[Nr1d2] Nuclear receptor subfamily 1 group D member 2 (Orphan nuclear receptor RVR) (Rev-erb-beta)
[Rorc Nr1f3 Rorg Thor] Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma) (Nuclear receptor subfamily 1 group F member 3) (RAR-related orphan receptor C) (Retinoid-related orphan receptor-gamma) (Thymus orphan receptor) (TOR)
[RORC NR1F3 RORG RZRG] Nuclear receptor ROR-gamma (Nuclear receptor RZR-gamma) (Nuclear receptor subfamily 1 group F member 3) (RAR-related orphan receptor C) (Retinoid-related orphan receptor-gamma)
[NR1D2] Nuclear receptor subfamily 1 group D member 2 (Orphan nuclear hormone receptor BD73) (Rev-erb alpha-related receptor) (RVR) (Rev-erb-beta) (V-erbA-related protein 1-related) (EAR-1R)
[RORA NR1F1 RZRA] Nuclear receptor ROR-alpha (Nuclear receptor RZR-alpha) (Nuclear receptor subfamily 1 group F member 1) (RAR-related orphan receptor A) (Retinoid-related orphan receptor-alpha)
[NR5A2 B1F CPF FTF] Nuclear receptor subfamily 5 group A member 2 (Alpha-1-fetoprotein transcription factor) (B1-binding factor) (hB1F) (CYP7A promoter-binding factor) (Hepatocytic transcription factor) (Liver receptor homolog 1) (LRH-1)
[Nr2c2 Mtr2r1 Tak1 Tr4] Nuclear receptor subfamily 2 group C member 2 (Orphan nuclear receptor TAK1) (Orphan nuclear receptor TR4) (Testicular receptor 4)
[NR4A1 GFRP1 HMR NAK1] Nuclear receptor subfamily 4 group A member 1 (Early response protein NAK1) (Nuclear hormone receptor NUR/77) (Nur77) (Orphan nuclear receptor HMR) (Orphan nuclear receptor TR3) (ST-59) (Testicular receptor 3)
[NR2C2 TAK1 TR4] Nuclear receptor subfamily 2 group C member 2 (Orphan nuclear receptor TAK1) (Orphan nuclear receptor TR4) (Testicular receptor 4)
[Rxrb Nr2b2] Retinoic acid receptor RXR-beta (MHC class I regulatory element-binding protein H-2RIIBP) (Nuclear receptor subfamily 2 group B member 2) (Retinoid X receptor beta)
[RORB NR1F2 RZRB] Nuclear receptor ROR-beta (Nuclear receptor RZR-beta) (Nuclear receptor subfamily 1 group F member 2) (Retinoid-related orphan receptor-beta)
[Nr4a1 Hmr Ngfib] Nuclear receptor subfamily 4 group A member 1 (NUR77) (Nerve growth factor-induced protein I-B) (NGFI-B) (Orphan nuclear receptor HMR)
[Nr4a1 Gfrp Hmr N10 Nur77] Nuclear receptor subfamily 4 group A member 1 (Nuclear hormone receptor NUR/77) (Nuclear protein N10) (Orphan nuclear receptor HMR)
[NR1H4 BAR FXR HRR1 RIP14] Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14)
[RXRA NR2B1] Retinoic acid receptor RXR-alpha (Nuclear receptor subfamily 2 group B member 1) (Retinoid X receptor alpha)
[Nr1h4 Bar Fxr Rip14] Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14)
[Rxrb Nr2b2 Rcor-1] Retinoic acid receptor RXR-beta (Nuclear receptor coregulator 1) (Nuclear receptor subfamily 2 group B member 2) (Retinoid X receptor beta) (Fragment)
[rxrbb nr2b2b rxrd] Retinoic acid receptor RXR-beta-B (Nuclear receptor subfamily 2 group B member 2-B) (Retinoic acid receptor RXR-delta) (Retinoid X receptor beta-B) (Retinoid X receptor delta)
[rxrba nr2b2a rxrb rxre] Retinoic acid receptor RXR-beta-A (Nuclear receptor subfamily 2 group B member 2-A) (Retinoid X receptor beta-A)
[RXRB NR2B2] Retinoic acid receptor RXR-beta (Nuclear receptor subfamily 2 group B member 2) (Retinoid X receptor beta)
[Esrrb Err-2 Err2 Nr3b2] Steroid hormone receptor ERR2 (Estrogen receptor-like 2) (Estrogen-related receptor beta) (ERR-beta) (Nuclear receptor subfamily 3 group B member 2)
[NR1H4] Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4)
[RARB HAP NR1B2] Retinoic acid receptor beta (RAR-beta) (HBV-activated protein) (Nuclear receptor subfamily 1 group B member 2) (RAR-epsilon)
[THRB ERBA2 NR1A2 THR1] Thyroid hormone receptor beta (Nuclear receptor subfamily 1 group A member 2) (c-erbA-2) (c-erbA-beta)
[Nr1h4 Bar Fxr Rip14] Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14)
[thrb nr1a2 trb si:ch211-264a6.2] Thyroid hormone receptor beta (TR-beta) (TRb) (Nuclear receptor subfamily 1 group A member 2) (Thyroid hormone receptor beta-1) (TRbeta1)
[Thrb Erba2 Nr1a2] Thyroid hormone receptor beta (Nuclear receptor subfamily 1 group A member 2) (c-erbA-2) (c-erbA-beta)

Bibliography :