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P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)

 LYAM3_RAT               Reviewed;         768 AA.
P98106;
01-FEB-1996, integrated into UniProtKB/Swiss-Prot.
01-FEB-1996, sequence version 1.
16-JAN-2019, entry version 138.
RecName: Full=P-selectin;
AltName: Full=CD62 antigen-like family member P;
AltName: Full=Granule membrane protein 140;
Short=GMP-140;
AltName: Full=Leukocyte-endothelial cell adhesion molecule 3;
Short=LECAM3;
AltName: Full=Platelet activation dependent granule-external membrane protein;
Short=PADGEM;
AltName: CD_antigen=CD62P;
Flags: Precursor;
Name=Selp;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INDUCTION BY
BACTERIAL LIPOPOLYSACCHARIDE.
TISSUE=Lung;
PubMed=7520013; DOI=10.1016/0378-1119(94)90015-9;
Auchampach J.A., Oliver M.G., Anderson D.C., Manning A.M.;
"Cloning, sequence comparison and in vivo expression of the gene
encoding rat P-selectin.";
Gene 145:251-255(1994).
-!- FUNCTION: Ca(2+)-dependent receptor for myeloid cells that binds
to carbohydrates on neutrophils and monocytes. Mediates the
interaction of activated endothelial cells or platelets with
leukocytes. The ligand recognized is sialyl-Lewis X. Mediates
rapid rolling of leukocyte rolling over vascular surfaces during
the initial steps in inflammation through interaction with SELPLG.
{ECO:0000250|UniProtKB:P16109}.
-!- SUBUNIT: Interacts with SNX17. Interacts with SELPLG/PSGL1 and
PODXL2 and mediates neutrophil adhesion and leukocyte rolling.
This interaction requires the sialyl-Lewis X epitope of SELPLG and
PODXL2, and specific tyrosine sulfation on SELPLG.
{ECO:0000250|UniProtKB:P16109}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000250|UniProtKB:P16109}; Single-pass type I membrane
protein {ECO:0000250|UniProtKB:P16109}.
-!- TISSUE SPECIFICITY: Not detected in the absence of exposure to
lipopolysaccharide (LPS). Detected only after exposure to
lipopolysaccharide (LPS) in the tissues examined: spleen, lung,
brain, liver, heart, kidney, thymus and small intestine.
{ECO:0000269|PubMed:7520013}.
-!- INDUCTION: By exposure to bacterial lipopolysaccharide (LPS).
{ECO:0000269|PubMed:7520013}.
-!- SIMILARITY: Belongs to the selectin/LECAM family. {ECO:0000305}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
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EMBL; L23088; AAA60325.1; -; mRNA.
PIR; I53821; I53821.
RefSeq; NP_037246.1; NM_013114.1.
UniGene; Rn.10012; -.
ProteinModelPortal; P98106; -.
SMR; P98106; -.
STRING; 10116.ENSRNOP00000003759; -.
ChEMBL; CHEMBL3879832; -.
jPOST; P98106; -.
PaxDb; P98106; -.
PRIDE; P98106; -.
GeneID; 25651; -.
KEGG; rno:25651; -.
UCSC; RGD:3656; rat.
CTD; 6403; -.
RGD; 3656; Selp.
eggNOG; ENOG410IS44; Eukaryota.
eggNOG; ENOG410Y5JF; LUCA.
HOGENOM; HOG000236254; -.
HOVERGEN; HBG052375; -.
InParanoid; P98106; -.
KO; K06496; -.
OrthoDB; 445079at2759; -.
PhylomeDB; P98106; -.
PRO; PR:P98106; -.
Proteomes; UP000002494; Unplaced.
GO; GO:0009897; C:external side of plasma membrane; IDA:RGD.
GO; GO:0005615; C:extracellular space; IDA:RGD.
GO; GO:0005887; C:integral component of plasma membrane; ISS:UniProtKB.
GO; GO:0005509; F:calcium ion binding; ISS:UniProtKB.
GO; GO:0070492; F:oligosaccharide binding; ISS:UniProtKB.
GO; GO:0016339; P:calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules; ISS:UniProtKB.
GO; GO:0098609; P:cell-cell adhesion; IMP:RGD.
GO; GO:0050900; P:leukocyte migration; IMP:RGD.
GO; GO:0050901; P:leukocyte tethering or rolling; ISS:UniProtKB.
GO; GO:0045785; P:positive regulation of cell adhesion; IMP:RGD.
GO; GO:0002691; P:regulation of cellular extravasation; IMP:RGD.
GO; GO:0032496; P:response to lipopolysaccharide; IEP:RGD.
GO; GO:0014070; P:response to organic cyclic compound; IEP:RGD.
CDD; cd00033; CCP; 8.
CDD; cd03592; CLECT_selectins_like; 1.
Gene3D; 3.10.100.10; -; 1.
InterPro; IPR001304; C-type_lectin-like.
InterPro; IPR016186; C-type_lectin-like/link_sf.
InterPro; IPR018378; C-type_lectin_CS.
InterPro; IPR016187; CTDL_fold.
InterPro; IPR013032; EGF-like_CS.
InterPro; IPR000742; EGF-like_dom.
InterPro; IPR033991; Selectin_CTLD.
InterPro; IPR002396; Selectin_superfamily.
InterPro; IPR035976; Sushi/SCR/CCP_sf.
InterPro; IPR000436; Sushi_SCR_CCP_dom.
Pfam; PF00059; Lectin_C; 1.
Pfam; PF00084; Sushi; 8.
PRINTS; PR00343; SELECTIN.
SMART; SM00032; CCP; 8.
SMART; SM00034; CLECT; 1.
SUPFAM; SSF56436; SSF56436; 1.
SUPFAM; SSF57535; SSF57535; 8.
PROSITE; PS00615; C_TYPE_LECTIN_1; 1.
PROSITE; PS50041; C_TYPE_LECTIN_2; 1.
PROSITE; PS00022; EGF_1; 1.
PROSITE; PS01186; EGF_2; 1.
PROSITE; PS50026; EGF_3; 1.
PROSITE; PS50923; SUSHI; 8.
2: Evidence at transcript level;
Calcium; Cell adhesion; Cell membrane; Complete proteome;
Disulfide bond; EGF-like domain; Glycoprotein; Lectin; Lipoprotein;
Membrane; Metal-binding; Palmitate; Reference proteome; Repeat;
Signal; Sushi; Transmembrane; Transmembrane helix.
SIGNAL 1 41 {ECO:0000255}.
CHAIN 42 768 P-selectin.
/FTId=PRO_0000017500.
TOPO_DOM 42 709 Extracellular. {ECO:0000255}.
TRANSMEM 710 733 Helical. {ECO:0000255}.
TOPO_DOM 734 768 Cytoplasmic. {ECO:0000255}.
DOMAIN 58 158 C-type lectin. {ECO:0000255|PROSITE-
ProRule:PRU00040}.
DOMAIN 159 195 EGF-like. {ECO:0000255|PROSITE-
ProRule:PRU00076}.
DOMAIN 198 259 Sushi 1. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 260 321 Sushi 2. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 322 383 Sushi 3. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 384 445 Sushi 4. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 446 507 Sushi 5. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 508 569 Sushi 6. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 578 639 Sushi 7. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
DOMAIN 640 701 Sushi 8. {ECO:0000255|PROSITE-
ProRule:PRU00302}.
REGION 759 768 Interaction with SNX17. {ECO:0000250}.
MOTIF 756 759 Endocytosis signal. {ECO:0000305}.
METAL 121 121 Calcium. {ECO:0000250|UniProtKB:P16109}.
METAL 123 123 Calcium. {ECO:0000250|UniProtKB:P16109}.
METAL 124 124 Calcium. {ECO:0000250|UniProtKB:P16109}.
METAL 146 146 Calcium. {ECO:0000250|UniProtKB:P16109}.
METAL 147 147 Calcium. {ECO:0000250|UniProtKB:P16109}.
BINDING 123 123 Carbohydrate.
{ECO:0000250|UniProtKB:P16109}.
BINDING 133 133 Carbohydrate.
{ECO:0000250|UniProtKB:P16109}.
BINDING 146 146 Carbohydrate.
{ECO:0000250|UniProtKB:P16109}.
LIPID 745 745 S-palmitoyl cysteine; alternate.
{ECO:0000250|UniProtKB:P16109}.
LIPID 745 745 S-stearoyl cysteine; alternate.
{ECO:0000250|UniProtKB:P16109}.
CARBOHYD 45 45 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 54 54 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 107 107 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 212 212 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 347 347 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 456 456 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 603 603 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 654 654 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 661 661 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 679 679 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 60 158 {ECO:0000250|UniProtKB:P16109}.
DISULFID 131 150 {ECO:0000250|UniProtKB:P16109}.
DISULFID 168 183 {ECO:0000250|UniProtKB:P16109}.
DISULFID 185 194 {ECO:0000250|UniProtKB:P16109}.
DISULFID 200 244 {ECO:0000250}.
DISULFID 230 257 {ECO:0000250}.
DISULFID 262 306 {ECO:0000250}.
DISULFID 292 319 {ECO:0000250}.
DISULFID 324 368 {ECO:0000250}.
DISULFID 354 381 {ECO:0000250}.
DISULFID 386 430 {ECO:0000250}.
DISULFID 416 443 {ECO:0000250}.
DISULFID 448 492 {ECO:0000250}.
DISULFID 478 505 {ECO:0000250}.
DISULFID 510 554 {ECO:0000250}.
DISULFID 540 567 {ECO:0000250}.
DISULFID 580 624 {ECO:0000250}.
DISULFID 610 637 {ECO:0000250}.
DISULFID 642 686 {ECO:0000250}.
DISULFID 672 699 {ECO:0000250}.
SEQUENCE 768 AA; 83517 MW; 26FD7E8A5F3F1316 CRC64;
MAGCPKGSWK PRLRSVVLGA AQLIWLSALI SELVNRKKVA TWTYNYSTKA YSWNNSRAFC
KRHFTDLVAI QNKNEIAHLN DVIPYVNSYY WIGIRKINNK WTWVGTNKTL TAEAENWADN
EPNNKRNNQD CVEIYIKSNS APGKWNDEPC FKRKRALCYT ASCQDMSCNS QGERIETIGS
YTCSCYPGFY GPECEYVQEC GKFDIPQHVL MNCSHPLGDF SFSSQCTFSC PEGYDLNGPS
EMQCLASGIW TNNPPQCKAV QCQSLEAPLH GTMDCTHPLA AFAYDSSCKF ECQPGYRMRG
SDILHCTDSG QWSEPLPTCE AIACEPLESP LHGSMDCFPS TGAFGYNSSC TFRCTEGFVL
MGNDAIHCAD LGQWTAPAPV CEALQCQEFP VPSKAQVSCS DPFGPLKYQS ACSFSCDEGS
LLVGASVIRC LATGHWSEAP PECQAVSCTP LLSPENGTMT CIQPLGHSNY KSTCQFMCDE
GFYLSGPERL DCSPSGHWTG SPPMCEAIKC PEIFAPEQGS LDCSHVHGEF SVGSTCHFSC
NEEFELLGSR NVECTVSGRW SAPPPTCKGV TSLPVPSVRC PALTTPGQGT MSCRHHLESF
GPNTTCYFGC KTGFTLRGAN SLRCGASGQW TAVTPVCRAV KCSELHMDTA VAMNCSNPWG
NFSYGSTCAF HCPEGQSLNG SARTTCGEDG HWSDAMPTCQ AGTLTIQEAL TYLGGALAST
SGLAVGGTLL ALLRKRLRKK DDGKCPLNPH SHLGTYGVFT NAAYDPTP


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Pathways :
WP1502: Mitochondrial biogenesis
WP1624: Bacterial secretion system
WP1665: Limonene and pinene degradation
WP1689: Porphyrin and chlorophyll metabolism
WP1692: Protein export
WP1713: Two-component system
WP1714: Tyrosine metabolism
WP2199: Seed Development
WP2328: Allograft rejection
WP1493: Carbon assimilation C4 pathway
WP1625: Base excision repair
WP1672: Mismatch repair
WP1676: Non-homologous end-joining
WP1678: Nucleotide excision repair
WP1909: Signal regulatory protein (SIRP) family interactions
WP2292: Chemokine signaling pathway
WP1049: G Protein Signaling Pathways
WP1069: Integrin-mediated cell adhesion
WP1165: G Protein Signaling Pathways
WP1185: Integrin-mediated cell adhesion
WP1371: G Protein Signaling Pathways
WP1386: Integrin-mediated cell adhesion
WP1424: Globo Sphingolipid Metabolism
WP1438: Influenza A virus infection
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Related Genes :
[SELP GMRP GRMP] P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
[Selp Grmp] P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
[Selp] P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
[SELP] P-selectin (CD62 antigen-like family member P) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62P)
[SELP] P-selectin (CD62 antigen-like family member P) (CD62P antigen) (Granule membrane protein 140) (GMP-140) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (Platelet activation dependent granule-external membrane protein) (PADGEM) (CD antigen CD62)
[SELE ELAM1] E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
[SELL LNHR LYAM1] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte surface antigen Leu-8) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (TQ1) (gp90-MEL) (CD antigen CD62L)
[Sell Lnhr Ly-22 Ly22] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (Lymphocyte antigen 22) (Ly-22) (Lymphocyte surface MEL-14 antigen) (CD antigen CD62L)
[Sele Elam-1] E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
[Sell Lnhr Ly-22] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (Lymphocyte antigen 22) (Ly-22) (Lymphocyte surface MEL-14 antigen) (CD antigen CD62L)
[SELE] E-selectin (CD62 antigen-like family member E) (Endothelial leukocyte adhesion molecule 1) (ELAM-1) (Leukocyte-endothelial cell adhesion molecule 2) (LECAM2) (CD antigen CD62E)
[SELL] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (CD antigen CD62L)
[SELL] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (CD antigen CD62L)
[SELL] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (CD antigen CD62L)
[SELL] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (CD antigen CD62L)
[SELL] L-selectin (CD62 antigen-like family member L) (Leukocyte adhesion molecule 1) (LAM-1) (Leukocyte-endothelial cell adhesion molecule 1) (LECAM1) (Lymph node homing receptor) (CD antigen CD62L)
[Ceacam1 Bgp Bgp1] Carcinoembryonic antigen-related cell adhesion molecule 1 (Biliary glycoprotein 1) (BGP-1) (Biliary glycoprotein D) (MHVR1) (Murine hepatitis virus receptor) (MHV-R) (CD antigen CD66a)
[CD84 SLAMF5] SLAM family member 5 (Cell surface antigen MAX.3) (Hly9-beta) (Leukocyte differentiation antigen CD84) (Signaling lymphocytic activation molecule 5) (CD antigen CD84)
[CD69 CLEC2C] Early activation antigen CD69 (Activation inducer molecule) (AIM) (BL-AC/P26) (C-type lectin domain family 2 member C) (EA1) (Early T-cell activation antigen p60) (GP32/28) (Leukocyte surface antigen Leu-23) (MLR-3) (CD antigen CD69)
[PECAM1] Platelet endothelial cell adhesion molecule (PECAM-1) (EndoCAM) (GPIIA') (PECA1) (CD antigen CD31)
[ITGAL CD11A] Integrin alpha-L (CD11 antigen-like family member A) (Leukocyte adhesion glycoprotein LFA-1 alpha chain) (LFA-1A) (Leukocyte function-associated molecule 1 alpha chain) (CD antigen CD11a)
[CEACAM1 BGP BGP1] Carcinoembryonic antigen-related cell adhesion molecule 1 (Biliary glycoprotein 1) (BGP-1) (CD antigen CD66a)
[PDGFRA PDGFR2 RHEPDGFRA] Platelet-derived growth factor receptor alpha (PDGF-R-alpha) (PDGFR-alpha) (EC 2.7.10.1) (Alpha platelet-derived growth factor receptor) (Alpha-type platelet-derived growth factor receptor) (CD140 antigen-like family member A) (CD140a antigen) (Platelet-derived growth factor alpha receptor) (Platelet-derived growth factor receptor 2) (PDGFR-2) (CD antigen CD140a)
[CD36 GP3B GP4] Platelet glycoprotein 4 (Fatty acid translocase) (FAT) (Glycoprotein IIIb) (GPIIIB) (Leukocyte differentiation antigen CD36) (PAS IV) (PAS-4) (Platelet collagen receptor) (Platelet glycoprotein IV) (GPIV) (Thrombospondin receptor) (CD antigen CD36)
[Ceacam1] Carcinoembryonic antigen-related cell adhesion molecule 1 (ATP-dependent taurocolate-carrier protein) (Cell-CAM 105) (C-CAM 105) (Ecto-ATPase) (GP110) (pp120) (CD antigen CD66a)
[SIRPA BIT MFR MYD1 PTPNS1 SHPS1 SIRP] Tyrosine-protein phosphatase non-receptor type substrate 1 (SHP substrate 1) (SHPS-1) (Brain Ig-like molecule with tyrosine-based activation motifs) (Bit) (CD172 antigen-like family member A) (Inhibitory receptor SHPS-1) (Macrophage fusion receptor) (MyD-1 antigen) (Signal-regulatory protein alpha-1) (Sirp-alpha-1) (Signal-regulatory protein alpha-2) (Sirp-alpha-2) (Signal-regulatory protein alpha-3) (Sirp-alpha-3) (p84) (CD antigen CD172a)
[psbA] Photosystem II protein D1 (PSII D1 protein) (EC 1.10.3.9) (Photosystem II Q(B) protein)
[ITGAM CD11B CR3A] Integrin alpha-M (CD11 antigen-like family member B) (CR-3 alpha chain) (Cell surface glycoprotein MAC-1 subunit alpha) (Leukocyte adhesion receptor MO1) (Neutrophil adherence receptor) (CD antigen CD11b)
[CD40LG CD40L TNFSF5 TRAP] CD40 ligand (CD40-L) (T-cell antigen Gp39) (TNF-related activation protein) (TRAP) (Tumor necrosis factor ligand superfamily member 5) (CD antigen CD154) [Cleaved into: CD40 ligand, membrane form; CD40 ligand, soluble form]
[PDGFRB PDGFR PDGFR1] Platelet-derived growth factor receptor beta (PDGF-R-beta) (PDGFR-beta) (EC 2.7.10.1) (Beta platelet-derived growth factor receptor) (Beta-type platelet-derived growth factor receptor) (CD140 antigen-like family member B) (Platelet-derived growth factor receptor 1) (PDGFR-1) (CD antigen CD140b)

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