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Photosystem II CP43 reaction center protein

 H2FAJ3_9ASPA            Unreviewed;       473 AA.
H2FAJ3;
21-MAR-2012, integrated into UniProtKB/TrEMBL.
21-MAR-2012, sequence version 1.
28-MAR-2018, entry version 30.
RecName: Full=Photosystem II CP43 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533, ECO:0000256|SAAS:SAAS00200243};
AltName: Full=PSII 43 kDa protein {ECO:0000256|HAMAP-Rule:MF_01496};
AltName: Full=Protein CP-43 {ECO:0000256|HAMAP-Rule:MF_01496};
Name=psbC {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000313|EMBL:AEX95676.1};
Hosta ventricosa (blue plantain lily).
Plastid; Chloroplast {ECO:0000313|EMBL:AEX95676.1}.
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Asparagales; Asparagaceae;
Agavoideae; Hosta.
NCBI_TaxID=39527 {ECO:0000313|EMBL:AEX95676.1};
[1] {ECO:0000313|EMBL:AEX95676.1}
NUCLEOTIDE SEQUENCE.
PubMed=22291168; DOI=10.3732/ajb.1100491;
Steele P.R., Hertweck K.L., Mayfield D., McKain M.R., Leebens-Mack J.,
Pires J.C.;
"Quality and quantity of data recovered from massively parallel
sequencing: Examples in Asparagales and Poaceae.";
Am. J. Bot. 99:330-348(2012).
[2] {ECO:0000313|EMBL:APO12218.1}
NUCLEOTIDE SEQUENCE.
PubMed=27793858;
McKain M.R., McNeal J.R., Kellar P.R., Eguiarte L.E., Pires J.C.,
Leebens-Mack J.;
"Timing of rapid diversification and convergent origins of active
pollination within Agavoideae (Asparagaceae).";
Am. J. Bot. 103:1717-1729(2016).
-!- FUNCTION: One of the components of the core complex of photosystem
II (PSII). It binds chlorophyll and helps catalyze the primary
light-induced photochemical processes of PSII. PSII is a light-
driven water:plastoquinone oxidoreductase, using light energy to
abstract electrons from H(2)O, generating O(2) and a proton
gradient subsequently used for ATP formation. {ECO:0000256|HAMAP-
Rule:MF_01496, ECO:0000256|RuleBase:RU004533,
ECO:0000256|SAAS:SAAS00944813}.
-!- COFACTOR:
Note=Binds multiple chlorophylls and provides some of the ligands
for the Ca-4Mn-5O cluster of the oxygen-evolving complex. It may
also provide a ligand for a Cl- that is required for oxygen
evolution. PSII binds additional chlorophylls, carotenoids and
specific lipids. {ECO:0000256|HAMAP-Rule:MF_01496};
-!- SUBUNIT: PSII is composed of 1 copy each of membrane proteins
PsbA, PsbB, PsbC, PsbD, PsbE, PsbF, PsbH, PsbI, PsbJ, PsbK, PsbL,
PsbM, PsbT, PsbX, PsbY, PsbZ, Ycf12, at least 3 peripheral
proteins of the oxygen-evolving complex and a large number of
cofactors. It forms dimeric complexes. {ECO:0000256|HAMAP-
Rule:MF_01496, ECO:0000256|RuleBase:RU004533}.
-!- SUBCELLULAR LOCATION: Plastid, chloroplast thylakoid membrane
{ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533};
Multi-pass membrane protein {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533}.
-!- SIMILARITY: Belongs to the PsbB/PsbC family. PsbC subfamily.
{ECO:0000256|HAMAP-Rule:MF_01496, ECO:0000256|RuleBase:RU004533,
ECO:0000256|SAAS:SAAS00569542}.
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EMBL; JQ275848; AEX95676.1; -; Genomic_DNA.
EMBL; KX931460; APO12218.1; -; Genomic_DNA.
RefSeq; YP_009335160.1; NC_032706.1.
ProteinModelPortal; H2FAJ3; -.
GeneID; 30766912; -.
GO; GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0009523; C:photosystem II; IEA:UniProtKB-KW.
GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-UniRule.
GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
GO; GO:0018298; P:protein-chromophore linkage; IEA:UniProtKB-KW.
HAMAP; MF_01496; PSII_PsbC_CP43; 1.
InterPro; IPR000932; PS_antenna-like.
InterPro; IPR036001; PS_II_antenna-like_sf.
InterPro; IPR005869; PSII_PsbC.
PANTHER; PTHR33180; PTHR33180; 1.
Pfam; PF00421; PSII; 1.
SUPFAM; SSF161077; SSF161077; 1.
TIGRFAMs; TIGR01153; psbC; 1.
3: Inferred from homology;
Acetylation {ECO:0000256|HAMAP-Rule:MF_01496};
Chlorophyll {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533, ECO:0000256|SAAS:SAAS00944814};
Chloroplast {ECO:0000256|RuleBase:RU004533,
ECO:0000313|EMBL:AEX95676.1};
Chromophore {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533, ECO:0000256|SAAS:SAAS00944814};
Manganese {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|SAAS:SAAS00458448};
Membrane {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|SAAS:SAAS00944822, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|SAAS:SAAS00458460};
Phosphoprotein {ECO:0000256|HAMAP-Rule:MF_01496};
Photosynthesis {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533, ECO:0000256|SAAS:SAAS00458451};
Photosystem II {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533, ECO:0000256|SAAS:SAAS00458451};
Plastid {ECO:0000256|RuleBase:RU004533, ECO:0000313|EMBL:AEX95676.1};
Thylakoid {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|RuleBase:RU004533};
Transmembrane {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|SAAS:SAAS00944822, ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_01496,
ECO:0000256|SAAS:SAAS00944822, ECO:0000256|SAM:Phobius}.
TRANSMEM 49 70 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 111 136 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 157 181 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 233 253 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 274 292 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 425 443 Helical. {ECO:0000256|SAM:Phobius}.
METAL 367 367 Calcium-manganese-oxide [Ca-4Mn-5O];
manganese 2. {ECO:0000256|HAMAP-
Rule:MF_01496}.
METAL 367 367 Calcium-manganese-oxide [Ca-4Mn-5O];
manganese 3. {ECO:0000256|HAMAP-
Rule:MF_01496}.
MOD_RES 15 15 N-acetylthreonine. {ECO:0000256|HAMAP-
Rule:MF_01496}.
MOD_RES 15 15 Phosphothreonine. {ECO:0000256|HAMAP-
Rule:MF_01496}.
SEQUENCE 473 AA; 51809 MW; 567A532BD9077570 CRC64;
MKTLYSLRRF YPVETLFNGT LALAGRDQET TGFAWWAGNA RLINLSGKLL GAHVAHAGLI
VFWAGAMNLF EVAHFVPEKP MYEQGLILLP HLATLGWGVG PGGEVIDTFP YFVSGVLHLI
SSAVLGFGGI YHALLGPETL EESFPFFGYV WKDRNKMTTI LGIHLILLGI GAFLLVLKAL
YFGGVYDTWA PGGGDVRKIT NLTLSPSVIF GYLLKSPFGG EGWIVSVDDL EDIIGGHVWL
GSICIFGGIW HILTKPFAWA RRAFVWSGEA YLSYSLAALS VFGFIACCFV WFNNTAYPSE
FYGPTGPEAS QAQAFTFLVR DQRLGANVGS AQGPTGLGKY LMRSPTGEVI FGGETMRFWD
LRAPWLEPLR GPNGLDLSRL KKDIQPWQER RSAEYMTHAP LGSLNSVGGV ATEINAVNYV
SPRSWLATSH FVLGFFLFVG HLWHAGRARA AAAGFEKGID RDLEPVLSMT PLS


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Kits Elisa; taq POLYMERASE

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