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Probable E3 ubiquitin ligase complex SCF subunit scon-2 (Sulfur controller 2) (SCON2) (Sulfur metabolite repression control protein 2)

 SCONB_NEUCR             Reviewed;         650 AA.
Q01277; Q7RVH3;
15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
01-NOV-1996, sequence version 1.
16-JAN-2019, entry version 137.
RecName: Full=Probable E3 ubiquitin ligase complex SCF subunit scon-2;
AltName: Full=Sulfur controller 2;
Short=SCON2;
AltName: Full=Sulfur metabolite repression control protein 2;
Name=scon-2; ORFNames=B13M15.090, NCU08563;
Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM
1257 / FGSC 987).
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae;
Neurospora.
NCBI_TaxID=367110;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND INDUCTION.
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=7724564; DOI=10.1073/pnas.92.8.3343;
Kumar A., Paietta J.V.;
"The sulfur controller-2 negative regulatory gene of Neurospora crassa
encodes a protein with beta-transducin repeats.";
Proc. Natl. Acad. Sci. U.S.A. 92:3343-3347(1995).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=12655011; DOI=10.1093/nar/gkg293;
Mannhaupt G., Montrone C., Haase D., Mewes H.-W., Aign V.,
Hoheisel J.D., Fartmann B., Nyakatura G., Kempken F., Maier J.,
Schulte U.;
"What's in the genome of a filamentous fungus? Analysis of the
Neurospora genome sequence.";
Nucleic Acids Res. 31:1944-1954(2003).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987;
PubMed=12712197; DOI=10.1038/nature01554;
Galagan J.E., Calvo S.E., Borkovich K.A., Selker E.U., Read N.D.,
Jaffe D.B., FitzHugh W., Ma L.-J., Smirnov S., Purcell S., Rehman B.,
Elkins T., Engels R., Wang S., Nielsen C.B., Butler J., Endrizzi M.,
Qui D., Ianakiev P., Bell-Pedersen D., Nelson M.A.,
Werner-Washburne M., Selitrennikoff C.P., Kinsey J.A., Braun E.L.,
Zelter A., Schulte U., Kothe G.O., Jedd G., Mewes H.-W., Staben C.,
Marcotte E., Greenberg D., Roy A., Foley K., Naylor J.,
Stange-Thomann N., Barrett R., Gnerre S., Kamal M., Kamvysselis M.,
Mauceli E.W., Bielke C., Rudd S., Frishman D., Krystofova S.,
Rasmussen C., Metzenberg R.L., Perkins D.D., Kroken S., Cogoni C.,
Macino G., Catcheside D.E.A., Li W., Pratt R.J., Osmani S.A.,
DeSouza C.P.C., Glass N.L., Orbach M.J., Berglund J.A., Voelker R.,
Yarden O., Plamann M., Seiler S., Dunlap J.C., Radford A., Aramayo R.,
Natvig D.O., Alex L.A., Mannhaupt G., Ebbole D.J., Freitag M.,
Paulsen I., Sachs M.S., Lander E.S., Nusbaum C., Birren B.W.;
"The genome sequence of the filamentous fungus Neurospora crassa.";
Nature 422:859-868(2003).
[4]
FUNCTION, DOMAIN, AND MUTAGENESIS OF LEU-122; ILE-127; LEU-130;
GLU-133; VAL-138; LEU-142; ASP-143; LEU-147; VAL-153; TRP-157 AND
TRP-167.
PubMed=9482900; DOI=10.1073/pnas.95.5.2417;
Kumar A., Paietta J.V.;
"An additional role for the F-box motif: gene regulation within the
Neurospora crassa sulfur control network.";
Proc. Natl. Acad. Sci. U.S.A. 95:2417-2422(1998).
-!- FUNCTION: Component of the SCF(scon-2) E3 ubiquitin ligase complex
involved in the regulation of sulfur metabolite repression,
probably by mediating the inactivation or degradation of the metR
transcription factor. {ECO:0000269|PubMed:9482900}.
-!- PATHWAY: Protein modification; protein ubiquitination.
-!- SUBUNIT: Component of the SCF(scon-2) E3 ubiquitin ligase complex.
{ECO:0000250}.
-!- INDUCTION: Expressed only under low-sulfur conditions and
expression is under the control of the cys-3 transcriptional
activator. {ECO:0000269|PubMed:7724564}.
-!- SIMILARITY: Belongs to the WD repeat MET30/SCONB/SCON-2 family.
{ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=EAA33589.2; Type=Erroneous initiation; Note=Translation N-terminally shortened.; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; U17251; AAA68968.1; -; Genomic_DNA.
EMBL; BX897673; CAE85499.1; -; Genomic_DNA.
EMBL; CM002238; EAA33589.2; ALT_INIT; Genomic_DNA.
PIR; T46660; T46660.
RefSeq; XP_962825.2; XM_957732.2.
ProteinModelPortal; Q01277; -.
SMR; Q01277; -.
PRIDE; Q01277; -.
EnsemblFungi; EAA33589; EAA33589; NCU08563.
GeneID; 3878980; -.
KEGG; ncr:NCU08563; -.
EuPathDB; FungiDB:NCU08563; -.
HOGENOM; HOG000166480; -.
InParanoid; Q01277; -.
KO; K10259; -.
OMA; PDLKCRR; -.
UniPathway; UPA00143; -.
Proteomes; UP000001805; Chromosome 3, Linkage Group III.
GO; GO:0043224; C:nuclear SCF ubiquitin ligase complex; IBA:GO_Central.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0043130; F:ubiquitin binding; IBA:GO_Central.
GO; GO:0000209; P:protein polyubiquitination; IBA:GO_Central.
Gene3D; 2.130.10.10; -; 3.
InterPro; IPR036047; F-box-like_dom_sf.
InterPro; IPR001810; F-box_dom.
InterPro; IPR020472; G-protein_beta_WD-40_rep.
InterPro; IPR011047; Quinoprotein_ADH-like_supfam.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR001680; WD40_repeat.
InterPro; IPR019775; WD40_repeat_CS.
InterPro; IPR017986; WD40_repeat_dom.
Pfam; PF12937; F-box-like; 1.
Pfam; PF00400; WD40; 6.
PRINTS; PR00320; GPROTEINBRPT.
SMART; SM00256; FBOX; 1.
SMART; SM00320; WD40; 7.
SUPFAM; SSF50998; SSF50998; 1.
SUPFAM; SSF81383; SSF81383; 1.
PROSITE; PS50181; FBOX; 1.
PROSITE; PS00678; WD_REPEATS_1; 2.
PROSITE; PS50082; WD_REPEATS_2; 6.
PROSITE; PS50294; WD_REPEATS_REGION; 1.
1: Evidence at protein level;
Complete proteome; Reference proteome; Repeat; Transcription;
Transcription regulation; Ubl conjugation pathway; WD repeat.
CHAIN 1 650 Probable E3 ubiquitin ligase complex SCF
subunit scon-2.
/FTId=PRO_0000051209.
DOMAIN 124 170 F-box. {ECO:0000255|PROSITE-
ProRule:PRU00080}.
REPEAT 292 320 WD 1.
REPEAT 332 360 WD 2.
REPEAT 372 400 WD 3.
REPEAT 411 441 WD 4.
REPEAT 453 488 WD 5.
REPEAT 528 564 WD 6.
REPEAT 576 604 WD 7.
REPEAT 616 644 WD 8.
MUTAGEN 122 122 L->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 127 127 I->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 130 130 L->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 133 133 E->A: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 138 138 V->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 142 142 L->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 143 143 D->I: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 147 147 L->E: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 153 153 V->D: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 157 157 W->G: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
MUTAGEN 167 167 W->G: Leads to constitutive sulfur system
repression. {ECO:0000269|PubMed:9482900}.
SEQUENCE 650 AA; 72189 MW; 7473859C99F1B028 CRC64;
MSSVLMSKTV TPFLREHIPS IYAPIGKPGN QETARAENPN SKYCYRHHPD SKCRRAADKA
KMVMIQSELD KLTSADQQAV THVWSLFSAA PARHRDLMLQ GILSQLCFPQ LSFVSREVNE
ALKIDFISAL PVELAQKVLC YLDTVSLTKA AQVSQRWRTL ADSDAVWVRM CEQHVNRKCT
KCGWGLPLLE RKKLRNYTRQ RQLAKGGPQG RVTELADSHD SQDRSVNQHG KRPAAEAEEE
DPIKKRQCMA AAEASKAVTQ PKTRSWKAVY RDRWQVSYNW KNSRYKLSVL KGHENGVTCL
QLDDNILATG SYDTTIKIWN IETEECIRTL VGHTAGIRAL QFDDSKLISG SLDHTIKVWN
WHTGECLSTF AAHTDSVISV HFDGHLLASG SSDKTVKIFD FNSKETYCLK GHSDWVNSTH
VDIKSRTVFS ASDDTTIKLW DLDTRQVIRT YEGHVGHVQQ VLILPPEYEP DEEVLNGASQ
DNQDAMSVSS GGSGSPSMSH AQIERAGSPG SHSSSHNLLP SSLPSGDEDV RHLYGSAFVA
DESRPLPPRY FMTGGLDSTM RLWDSATGRC LRTLFGHLEG VWSLAGDTIR VISGANDGMV
KTWEPRSGKC DATYTGHCGP VTCVGLSDSL MASGSEDGTI RLHSFKPCRQ


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Pathways :
WP1566: Citrate cycle (TCA cycle)
WP1626: Benzoate degradation via CoA ligation
WP1634: Butanoate metabolism
WP1672: Mismatch repair
WP1680: Oxidative phosphorylation
WP2272: Pathogenic Escherichia coli infection
WP2292: Chemokine signaling pathway
WP1625: Base excision repair
WP1644: DNA replication
WP1663: Homologous recombination
WP1676: Non-homologous end-joining
WP1678: Nucleotide excision repair
WP1693: Purine metabolism
WP1694: Pyrimidine metabolism
WP1705: Sulfur metabolism
WP211: BMP signaling pathway
WP2199: Seed Development
WP440: Sulfur degradation
WP7: Sulfur Amino Acid biosynthesis
WP1049: G Protein Signaling Pathways
WP1078: G1 to S cell cycle control
WP1097: Non-homologous end joining
WP1102: EBV LMP1 signaling
WP1122: Blood Clotting Cascade
WP1165: G Protein Signaling Pathways

Related Genes :
[scon-2 B13M15.090 NCU08563] Probable E3 ubiquitin ligase complex SCF subunit scon-2 (Sulfur controller 2) (SCON2) (Sulfur metabolite repression control protein 2)
[MET30 YIL046W] F-box protein MET30 (E3 ubiquitin ligase complex SCF(Met30) subunit MET30) (Methionine-requiring protein 30)
[scon-3 skp1 NCU08991] E3 ubiquitin ligase complex SCF subunit scon-3 (Sulfur control protein 3) (Sulfur metabolite repression control scon-3)
[Rnf2 DinG Ring1b] E3 ubiquitin-protein ligase RING2 (EC 2.3.2.27) (RING finger protein 1B) (RING1b) (RING finger protein 2) (RING-type E3 ubiquitin transferase RING2)
[RBX1 RNF75 ROC1] E3 ubiquitin-protein ligase RBX1 (EC 2.3.2.27) (EC 2.3.2.32) (E3 ubiquitin-protein transferase RBX1) (Protein ZYP) (RING finger protein 75) (RING-box protein 1) (Rbx1) (Regulator of cullins 1) (ROC1) [Cleaved into: E3 ubiquitin-protein ligase RBX1, N-terminally processed (E3 ubiquitin-protein transferase RBX1, N-terminally processed)]
[PRKN PARK2] E3 ubiquitin-protein ligase parkin (Parkin) (EC 2.3.2.31) (Parkin RBR E3 ubiquitin-protein ligase) (Parkinson juvenile disease protein 2) (Parkinson disease protein 2)
[Rbx1] E3 ubiquitin-protein ligase RBX1 (EC 2.3.2.27) (EC 2.3.2.32) (E3 ubiquitin-protein transferase RBX1) (RING finger protein 75) (RING-box protein 1) (Rbx1) [Cleaved into: E3 ubiquitin-protein ligase RBX1, N-terminally processed]
[RNF2 BAP1 DING HIPI3 RING1B] E3 ubiquitin-protein ligase RING2 (EC 2.3.2.27) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) (Protein DinG) (RING finger protein 1B) (RING1b) (RING finger protein 2) (RING finger protein BAP-1) (RING-type E3 ubiquitin transferase RING2)
[ubr-1 C32E8.11] E3 ubiquitin-protein ligase ubr-1 (EC 2.3.2.27) (N-recognin-1) (RING-type E3 ubiquitin transferase ubr-1) (Ubiquitin-protein ligase E3-alpha)
[plr-1 Y47D3B.11] Probable E3 ubiquitin-protein ligase plr-1 (EC 2.3.2.-) (Probable E3 ubiquitin-protein transferase plr-1)
[Prkn Park2] E3 ubiquitin-protein ligase parkin (EC 2.3.2.31) (Parkin RBR E3 ubiquitin-protein ligase)
[Prkn Park2] E3 ubiquitin-protein ligase parkin (EC 2.3.2.31) (Parkin RBR E3 ubiquitin-protein ligase)
[GRR1 CAT80 COT2 YJR090C J1885] SCF E3 ubiquitin ligase complex F-box protein GRR1 (F-box and leucine-rich repeat protein GRR1) (F-box/LRR-repeat protein GRR1)
[LOG2 RF215 RIG2 At3g09770 F11F8.36 F8A24.18] Probable E3 ubiquitin-protein ligase LOG2 (EC 2.3.2.27) (Probable RING-type E3 ubiquitin transferase LOG2) (Protein LOSS OF GDU2) (RING finger protein 215)
[Traf2] TNF receptor-associated factor 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF2) (RING-type E3 ubiquitin transferase TRAF2)
[Siah2] E3 ubiquitin-protein ligase SIAH2 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase SIAH2) (Seven in absentia homolog 2) (Siah-2) (mSiah2)
[Ubr5 Dd5 Edd Edd1 Hyd] E3 ubiquitin-protein ligase UBR5 (EC 2.3.2.26) (100 kDa protein) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (HECT-type E3 ubiquitin transferase UBR5) (Hyperplastic discs protein homolog)
[Uhrf1 Np95] E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) (Nuclear protein 95) (Nuclear zinc finger protein Np95) (RING-type E3 ubiquitin transferase UHRF1) (Ubiquitin-like PHD and RING finger domain-containing protein 1) (mUhrf1) (Ubiquitin-like-containing PHD and RING finger domains protein 1)
[hulA NFIA_016110] Probable E3 ubiquitin-protein ligase hulA (EC 2.3.2.26) (HECT ubiquitin ligase A) (HECT-type E3 ubiquitin transferase RSP5)
[hulA ACLA_026000] Probable E3 ubiquitin-protein ligase hulA (EC 2.3.2.26) (HECT ubiquitin ligase A) (HECT-type E3 ubiquitin transferase hulA)
[hulA ATEG_08573] Probable E3 ubiquitin-protein ligase hulA (EC 2.3.2.26) (HECT ubiquitin ligase A) (HECT-type E3 ubiquitin transferase hulA)
[hulA AO090012000923] Probable E3 ubiquitin-protein ligase hulA (EC 2.3.2.26) (HECT ubiquitin ligase A) (HECT-type E3 ubiquitin transferase hulA)
[hulA AFLA_021670] Probable E3 ubiquitin-protein ligase hulA (EC 2.3.2.26) (HECT ubiquitin ligase A) (HECT-type E3 ubiquitin transferase hulA)
[UBR5 EDD EDD1 HYD KIAA0896] E3 ubiquitin-protein ligase UBR5 (EC 2.3.2.26) (E3 ubiquitin-protein ligase, HECT domain-containing 1) (HECT-type E3 ubiquitin transferase UBR5) (Hyperplastic discs protein homolog) (hHYD) (Progestin-induced protein)
[TRIM28 KAP1 RNF96 TIF1B] Transcription intermediary factor 1-beta (TIF1-beta) (E3 SUMO-protein ligase TRIM28) (EC 2.3.2.27) (KRAB-associated protein 1) (KAP-1) (KRAB-interacting protein 1) (KRIP-1) (Nuclear corepressor KAP-1) (RING finger protein 96) (RING-type E3 ubiquitin transferase TIF1-beta) (Tripartite motif-containing protein 28)
[dsc2 ucp14 SPAC1486.02c] DSC E3 ubiquitin ligase complex subunit 2 (EC 2.3.2.27) (Defective for SREBP cleavage protein 2) (RING-type E3 ubiquitin transferase DSC2) (UBA domain-containing protein 14)
[TRIP12 KIAA0045 ULF] E3 ubiquitin-protein ligase TRIP12 (EC 2.3.2.26) (E3 ubiquitin-protein ligase for Arf) (ULF) (HECT-type E3 ubiquitin transferase TRIP12) (Thyroid receptor-interacting protein 12) (TR-interacting protein 12) (TRIP-12)
[slx8 SPBC3D6.11c] E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 (EC 2.3.2.27) (RING finger protein slx8) (RING-dependent E3 ubiquitin-protein ligase slx8) (RING-type E3 ubiquitin transferase slx8) (Synthetic lethal of unknown function protein 8)
[COP1 At2g32950 T21L14.11] E3 ubiquitin-protein ligase COP1 (EC 2.3.2.27) (Constitutive photomorphogenesis protein 1) (RING-type E3 ubiquitin transferase COP1)
[Pre C,C C core E PC pre-C pre-C/C PreC preC PreC/C preC/C precore-core HBVgp4] Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5)

Bibliography :
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