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Probable serine/threonine-protein kinase BSK3 (EC 2.7.11.1) (Brassinosteroid-signaling kinase 3) (OsBSK3) (Receptor-like cytoplasmic kinase 173) (OsRLCK173)

 BSK3_ORYSJ              Reviewed;         494 AA.
B9FDE0; A0A0N7KJY5; Q0J8W5; Q7XPV0;
15-FEB-2017, integrated into UniProtKB/Swiss-Prot.
13-OCT-2009, sequence version 1.
31-JUL-2019, entry version 54.
RecName: Full=Probable serine/threonine-protein kinase BSK3 {ECO:0000305};
EC=2.7.11.1 {ECO:0000305};
AltName: Full=Brassinosteroid-signaling kinase 3 {ECO:0000305};
Short=OsBSK3 {ECO:0000303|PubMed:26697897};
AltName: Full=Receptor-like cytoplasmic kinase 173 {ECO:0000303|PubMed:19825577};
Short=OsRLCK173 {ECO:0000303|PubMed:19825577};
Name=BSK3 {ECO:0000303|PubMed:26697897};
Synonyms=RLCK173 {ECO:0000303|PubMed:19825577};
OrderedLocusNames=Os04g0684200 {ECO:0000312|EMBL:BAS91713.1},
LOC_Os04g58750 {ECO:0000305};
ORFNames=OsJ_16683 {ECO:0000312|EMBL:EEE61937.1},
OSJNBa0088H09.6 {ECO:0000312|EMBL:CAE03448.1};
Oryza sativa subsp. japonica (Rice).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
NCBI_TaxID=39947;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=12447439; DOI=10.1038/nature01183;
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J.,
Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y.,
Weng Q., Zhang L., Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D.,
Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J.,
Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H.,
Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y.,
Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W.,
Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W.,
Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y.,
Han B.;
"Sequence and analysis of rice chromosome 4.";
Nature 420:316-320(2002).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=16100779; DOI=10.1038/nature03895;
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
PubMed=18089549; DOI=10.1093/nar/gkm978;
The rice annotation project (RAP);
"The rice annotation project database (RAP-DB): 2008 update.";
Nucleic Acids Res. 36:D1028-D1033(2008).
[4]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
PubMed=24280374; DOI=10.1186/1939-8433-6-4;
Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
Buell C.R., Matsumoto T.;
"Improvement of the Oryza sativa Nipponbare reference genome using
next generation sequence and optical map data.";
Rice 6:4-4(2013).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H.,
Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J.,
Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X.,
Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y.,
Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J.,
Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y.,
Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y.,
Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z.,
Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T.,
Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H.,
Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J.,
Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[6]
GENE FAMILY, AND NOMENCLATURE.
PubMed=19825577; DOI=10.1093/mp/ssn047;
Vij S., Giri J., Dansana P.K., Kapoor S., Tyagi A.K.;
"The receptor-like cytoplasmic kinase (OsRLCK) gene family in rice:
organization, phylogenetic relationship, and expression during
development and stress.";
Mol. Plant 1:732-750(2008).
[7]
FUNCTION, IDENTIFICATION BY MASS SPECTROMETRY, INTERACTION WITH BRI1
AND BSL1, SUBCELLULAR LOCATION, INDUCTION BY 24-EPIBRASSINOLIDE,
MYRISTOYLATION AT GLY-2, PHOSPHORYLATION AT SER-213 AND SER-215, AND
MUTAGENESIS OF 2-GLY-GLY-3; SER-213 AND SER-215.
PubMed=26697897; DOI=10.1104/pp.15.01668;
Zhang B., Wang X., Zhao Z., Wang R., Huang X., Zhu Y., Yuan L.,
Wang Y., Xu X., Burlingame A.L., Gao Y., Sun Y., Tang W.;
"OsBRI1 activates BR signaling by preventing binding between the TPR
and kinase domains of OsBSK3 via phosphorylation.";
Plant Physiol. 170:1149-1161(2016).
-!- FUNCTION: Probable serine/threonine kinase that acts as positive
regulator of brassinosteroid (BR) signaling downstream of BRI1.
{ECO:0000269|PubMed:26697897}.
-!- CATALYTIC ACTIVITY:
Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999,
ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216;
EC=2.7.11.1; Evidence={ECO:0000305};
-!- CATALYTIC ACTIVITY:
Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
EC=2.7.11.1; Evidence={ECO:0000305};
-!- SUBUNIT: Interacts with BRI1 and BSL1.
{ECO:0000269|PubMed:26697897}.
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:26697897};
Lipid-anchor {ECO:0000305|PubMed:26697897}. Note=Plasma membrane
localization is required for its function in the regulation of
brassinosteroid signaling. {ECO:0000269|PubMed:26697897}.
-!- INDUCTION: Induced by 24-epibrassinolide in roots and leaves.
{ECO:0000269|PubMed:26697897}.
-!- PTM: Phosphorylated at Ser-213 and Ser-215 by BRI1.
Phosphorylation at Ser-215 is required for its function in the
regulation of brassinosteroid signaling. Phosphorylation by BRI1
disrupts the interaction between its TPR and kinase domains,
thereby increasing the binding between its kinase domain and BSL1.
{ECO:0000269|PubMed:26697897}.
-!- SEQUENCE CAUTION:
Sequence=BAF16222.2; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Sequence=BAS91713.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Sequence=CAE03448.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AL606651; CAE03448.1; ALT_SEQ; Genomic_DNA.
EMBL; AP008210; BAF16222.2; ALT_SEQ; Genomic_DNA.
EMBL; AP014960; BAS91713.1; ALT_SEQ; Genomic_DNA.
EMBL; CM000141; EEE61937.1; -; Genomic_DNA.
SMR; B9FDE0; -.
STRING; 4530.OS04T0684200-01; -.
iPTMnet; B9FDE0; -.
eggNOG; ENOG410IGD2; Eukaryota.
eggNOG; ENOG410XQTV; LUCA.
Proteomes; UP000059680; Chromosome 4.
GO; GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO; GO:0009742; P:brassinosteroid mediated signaling pathway; IBA:GO_Central.
GO; GO:1900459; P:positive regulation of brassinosteroid mediated signaling pathway; IMP:UniProtKB.
Gene3D; 1.25.40.10; -; 1.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
InterPro; IPR011990; TPR-like_helical_dom_sf.
Pfam; PF07714; Pkinase_Tyr; 1.
SUPFAM; SSF48452; SSF48452; 1.
SUPFAM; SSF56112; SSF56112; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
1: Evidence at protein level;
ATP-binding; Cell membrane; Complete proteome; Kinase; Lipoprotein;
Membrane; Myristate; Nucleotide-binding; Phosphoprotein;
Reference proteome; Serine/threonine-protein kinase; TPR repeat;
Transferase.
INIT_MET 1 1 Removed. {ECO:0000305|PubMed:26697897}.
CHAIN 2 494 Probable serine/threonine-protein kinase
BSK3.
/FTId=PRO_0000439010.
DOMAIN 61 316 Protein kinase. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
REPEAT 423 456 TPR. {ECO:0000255|PROSITE-
ProRule:PRU00339}.
NP_BIND 67 75 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
COMPBIAS 11 14 Cys-rich. {ECO:0000255|PROSITE-
ProRule:PRU00005}.
ACT_SITE 183 183 Proton acceptor. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
BINDING 89 89 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
MOD_RES 213 213 Phosphoserine.
{ECO:0000269|PubMed:26697897}.
MOD_RES 215 215 Phosphoserine.
{ECO:0000269|PubMed:26697897}.
LIPID 2 2 N-myristoyl glycine.
{ECO:0000305|PubMed:26697897}.
MUTAGEN 2 3 GG->AA: Loss of plasma membrane
localization.
{ECO:0000269|PubMed:26697897}.
MUTAGEN 213 213 S->A: No effect on its function in the
regulation of brassinosteroid signaling.
{ECO:0000269|PubMed:26697897}.
MUTAGEN 213 213 S->E: No effect on its function in the
regulation of brassinosteroid signaling.
MUTAGEN 215 215 S->A: Loss of its function in the
regulation of brassinosteroid signaling.
{ECO:0000269|PubMed:26697897}.
MUTAGEN 215 215 S->E: Constitutively active in its
function in the regulation of
brassinosteroid signaling; increases
binding affinity for BSL1.
{ECO:0000269|PubMed:26697897}.
SEQUENCE 494 AA; 55412 MW; 29060296A5DA83EF CRC64;
MGGRVSKAVA CCCCRSQHHG VVVESSEKTA EEDHGESYEL PAFQEFSFEQ LRLATSGFAV
ENIVSEHGEK APNVVYKGKL DAQRRIAVKR FNRSAWPDPR QFLEEAKSVG QLRSKRLANL
LGCCCEGDER LLVAEYMPND TLAKHLFHWE AQAMKWPMRL RVVLYLAEAL EYCTSKGRAL
YHDLNAYRVL FDDDCNPRLS CFGLMKNSRD GKSYSTNLAF TPPEYMRTGR ITPESVIYSF
GTLLLDVLSG KHIPPSHALD LIRDRNFNML TDSCLEGQFS NEEGTELVRL ASRCLHYEPR
ERPNVRSLVQ ALAPLQKDLE TPSYELMDIP RGGATSVQSL LLSPLAEACS RKDLTAIHEI
LEKTGYKDDE GTANELSFQM WTNQMQDTLN SKKKGDNAFR QKDFSSAIDC YSQFIEVGTM
VSPTIYARRC LSYLMNDKAE QALSDAMQAL VISPTWPTAF YLQAAALLSL GMENEAQEAI
KDGCAHETSS SSGH


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Related Genes :
[BRI1 D61 Os01g0718300 LOC_Os01g52050 P0480C01.18-1] Brassinosteroid LRR receptor kinase BRI1 (EC 2.7.11.1) (Protein BRASSINOSTEROID INSENSITIVE 1 homolog) (OsBRI1) (Protein DWARF 61)
[BRI1 At4g39400 F23K16.30] Protein BRASSINOSTEROID INSENSITIVE 1 (AtBRI1) (EC 2.7.10.1) (EC 2.7.11.1) (Brassinosteroid LRR receptor kinase)
[ASK7 BIN2 DWF12 SK21 UCU1 At4g18710 F28A21.120] Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta) (Protein BRASSINOSTEROID INSENSITIVE 2) (Protein ULTRACURVATA 1) (Shaggy-related protein kinase 21) (AtSK21)
[BAK1 ELG SERK3 At4g33430 F17M5.190] BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 (AtBAK1) (BRI1-associated receptor kinase 1) (EC 2.7.10.1) (EC 2.7.11.1) (Protein ELONGATED) (Somatic embryogenesis receptor kinase 3) (AtSERK3) (Somatic embryogenesis receptor-like kinase 3)
[ERECTA ER QRP1 QRS1 TE1 At2g26330 T1D16.3] LRR receptor-like serine/threonine-protein kinase ERECTA (EC 2.7.11.1) (Protein QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1) (Protein QUANTITATIVE RESISTANCE TO RALSTONIA SOLANACEARUM 1) (Protein TRANSPIRATION EFFICIENCY 1)
[BRL3 At3g13380 MRP15.1] Receptor-like protein kinase BRI1-like 3 (EC 2.7.10.1) (EC 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
[BIK1 At2g39660 F12L6.32 F17A14.3] Serine/threonine-protein kinase BIK1 (EC 2.7.11.1) (Protein BOTRYTIS-INDUCED KINASE 1)
[Pik3cg Pi3kg1] Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (PI3-kinase subunit gamma) (PI3K-gamma) (PI3Kgamma) (PtdIns-3-kinase subunit gamma) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit gamma) (PtdIns-3-kinase subunit p110-gamma) (p110gamma) (Phosphoinositide-3-kinase catalytic gamma polypeptide) (Serine/threonine protein kinase PIK3CG) (EC 2.7.11.1) (p120-PI3K)
[BSK1-2 Os10g0542800 LOC_Os10g39670 OsJ_32329 OSJNBb0015I11.13] Serine/threonine-protein kinase BSK1-2 (EC 2.7.11.1) (Brassinosteroid-signaling kinase 1-2) (OsBSK1-2)
[Ripk3 Rip3] Receptor-interacting serine/threonine-protein kinase 3 (EC 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) (mRIP3)
[BMPR1A ACVRLK3 ALK3] Bone morphogenetic protein receptor type-1A (BMP type-1A receptor) (BMPR-1A) (EC 2.7.11.30) (Activin receptor-like kinase 3) (ALK-3) (Serine/threonine-protein kinase receptor R5) (SKR5) (CD antigen CD292)
[TGFBR1 ALK5 SKR4] TGF-beta receptor type-1 (TGFR-1) (EC 2.7.11.30) (Activin A receptor type II-like protein kinase of 53kD) (Activin receptor-like kinase 5) (ALK-5) (ALK5) (Serine/threonine-protein kinase receptor R4) (SKR4) (TGF-beta type I receptor) (Transforming growth factor-beta receptor type I) (TGF-beta receptor type I) (TbetaR-I)
[UL97] Serine/threonine protein kinase UL97 (EC 2.7.1.-) (Ganciclovir kinase) (HSRF3 protein)
[GSK3B] Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
[ACVR1B ACVRLK4 ALK4] Activin receptor type-1B (EC 2.7.11.30) (Activin receptor type IB) (ACTR-IB) (Activin receptor-like kinase 4) (ALK-4) (Serine/threonine-protein kinase receptor R2) (SKR2)
[Acvr1b Alk4] Activin receptor type-1B (EC 2.7.11.30) (Activin receptor type IB) (ACTR-IB) (Activin receptor-like kinase 4) (ALK-4) (Serine/threonine-protein kinase receptor R2) (SKR2)
[RIPK2 CARDIAK RICK RIP2 UNQ277/PRO314/PRO34092] Receptor-interacting serine/threonine-protein kinase 2 (EC 2.7.11.1) (CARD-containing interleukin-1 beta-converting enzyme-associated kinase) (CARD-containing IL-1 beta ICE-kinase) (RIP-like-interacting CLARP kinase) (Receptor-interacting protein 2) (RIP-2) (Tyrosine-protein kinase RIPK2) (EC 2.7.10.2)
[ACVR1 ACVRLK2] Activin receptor type-1 (EC 2.7.11.30) (Activin receptor type I) (ACTR-I) (Activin receptor-like kinase 2) (ALK-2) (Serine/threonine-protein kinase receptor R1) (SKR1) (TGF-B superfamily receptor type I) (TSR-I)
[BAK1 BISERK1 Os08g0174700 LOC_Os08g07760 OsJ_26221 OSJNBa0054L03.30] LRR receptor kinase BAK1 (EC 2.7.11.1) (BRI1-associated receptor kinase 1 homolog) (OsBAK1) (Benzothiadiazole-induced SERK1) (BTH-induced SERK1) (OsBISERK1) (Somatic embryogenesis receptor kinase 1) (OsSERK1)
[Acvr1b Acvrlk4 Alk4] Activin receptor type-1B (EC 2.7.11.30) (Activin receptor type IB) (ACTR-IB) (Activin receptor-like kinase 4) (ALK-4) (Serine/threonine-protein kinase receptor R2) (SKR2)
[CDG1 At3g26940 MOJ10.2] Serine/threonine-protein kinase CDG1 (EC 2.7.11.1) (Protein CONSTITUTIVE DIFFERENTIAL GROWTH 1)
[Gsk3b] Glycogen synthase kinase-3 beta (GSK-3 beta) (EC 2.7.11.26) (Serine/threonine-protein kinase GSK3B) (EC 2.7.11.1)
[CDK9 CDC2L4 TAK] Cyclin-dependent kinase 9 (EC 2.7.11.22) (EC 2.7.11.23) (C-2K) (Cell division cycle 2-like protein kinase 4) (Cell division protein kinase 9) (Serine/threonine-protein kinase PITALRE) (Tat-associated kinase complex catalytic subunit)
[TOR2 DRR2 TSC14 YKL203C] Serine/threonine-protein kinase TOR2 (EC 2.7.1.67) (EC 2.7.11.1) (Dominant rapamycin resistance protein 2) (Phosphatidylinositol 4-kinase TOR2) (PI4-kinase TOR2) (PI4K TOR2) (PtdIns-4-kinase TOR2) (Target of rapamycin kinase 2) (Temperature-sensitive CSG2 suppressor protein 14)
[GHR1 RCD7 At4g20940 T13K14.100] LRR receptor-like serine/threonine-protein kinase GHR1 (EC 2.7.11.1) (Protein GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1) (AtGHR1) (Protein RADICAL-INDUCED CELL DEATH 7)
[WNK1 HSN2 KDP KIAA0344 PRKWNK1] Serine/threonine-protein kinase WNK1 (EC 2.7.11.1) (Erythrocyte 65 kDa protein) (p65) (Kinase deficient protein) (Protein kinase lysine-deficient 1) (Protein kinase with no lysine 1) (hWNK1)
[PSKR1 PSKR At2g02220 F5O4.1] Phytosulfokine receptor 1 (AtPSKR1) (EC 2.7.11.1) (EC 4.6.1.2) (Guanylate cyclase) (Phytosulfokine LRR receptor kinase 1) (Protein serine-threonine kinase)
[TOR1 DRR1 YJR066W J1803] Serine/threonine-protein kinase TOR1 (EC 2.7.11.1) (Dominant rapamycin resistance protein 1) (Phosphatidylinositol kinase homolog TOR1) (Target of rapamycin kinase 1)
[Lrrk2] Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (EC 3.6.5.-)
[PIK3CG] Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform (PI3-kinase subunit gamma) (PI3K-gamma) (PI3Kgamma) (PtdIns-3-kinase subunit gamma) (EC 2.7.1.153) (Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit gamma) (PtdIns-3-kinase subunit p110-gamma) (p110gamma) (Phosphoinositide-3-kinase catalytic gamma polypeptide) (Serine/threonine protein kinase PIK3CG) (EC 2.7.11.1) (p120-PI3K)

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