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Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)

 A0A024L2A9_ECOLX        Unreviewed;       283 AA.
A0A024L2A9; A0A236LSQ8; A0A2A2XKN4;
09-JUL-2014, integrated into UniProtKB/TrEMBL.
09-JUL-2014, sequence version 1.
11-DEC-2019, entry version 60.
RecName: Full=Protein/nucleic acid deglycase HchA {ECO:0000256|HAMAP-Rule:MF_01046};
EC=3.1.2.- {ECO:0000256|HAMAP-Rule:MF_01046};
EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01046};
EC=3.5.1.124 {ECO:0000256|HAMAP-Rule:MF_01046};
AltName: Full=Maillard deglycase {ECO:0000256|HAMAP-Rule:MF_01046};
Name=hchA {ECO:0000256|HAMAP-Rule:MF_01046, ECO:0000313|EMBL:CTT47607.1};
ORFNames=A8C65_13880 {ECO:0000313|EMBL:OWD69214.1},
A9R57_25255 {ECO:0000313|EMBL:OEI66394.1},
AKG99_20940 {ECO:0000313|EMBL:KNZ97201.1},
AMK83_16550 {ECO:0000313|EMBL:KYV68606.1},
B7C53_22525 {ECO:0000313|EMBL:OWS83388.1},
B9M99_11580 {ECO:0000313|EMBL:RBV92817.1},
B9T59_01945 {ECO:0000313|EMBL:AWR80034.1},
BJJ90_15205 {ECO:0000313|EMBL:APT03265.1},
BMT49_12710 {ECO:0000313|EMBL:OKB79100.1},
BON66_15955 {ECO:0000313|EMBL:TEZ16852.1},
BON86_06490 {ECO:0000313|EMBL:TFA19111.1},
BON95_14610 {ECO:0000313|EMBL:TFA65399.1},
BUE81_10670 {ECO:0000313|EMBL:OLR87354.1},
BvCms12BK_01457 {ECO:0000313|EMBL:GCF99761.1},
BvCms28BK_04168 {ECO:0000313|EMBL:GCH08557.1},
BvCmsHHP001_02632 {ECO:0000313|EMBL:GCR80410.1},
BvCmsKKP061_00566 {ECO:0000313|EMBL:GDH29133.1},
BvCmsKSP015_01352 {ECO:0000313|EMBL:GDL47944.1},
BvCmsKSP045_04450 {ECO:0000313|EMBL:GDL76575.1},
BvCmsKSP058_03204 {ECO:0000313|EMBL:GDL45803.1},
BvCmsKSP067_02879 {ECO:0000313|EMBL:GDO47595.1},
BvCmsKSP083_03900 {ECO:0000313|EMBL:GDM74344.1},
BvCmsNSP006_03750 {ECO:0000313|EMBL:GDP37344.1},
BvCmsNSP007_03329 {ECO:0000313|EMBL:GDP81692.1},
BvCmsNSP047_03567 {ECO:0000313|EMBL:GDR52300.1},
BvCmsSINP011_04162 {ECO:0000313|EMBL:GDR90575.1},
BW690_17225 {ECO:0000313|EMBL:ONG27328.1},
BZL69_29425 {ECO:0000313|EMBL:OUK85779.1},
C2U48_24800 {ECO:0000313|EMBL:AUV33619.1},
C5715_19445 {ECO:0000313|EMBL:PQP29065.1},
C5N07_21380 {ECO:0000313|EMBL:PQP07737.1},
C6669_19295 {ECO:0000313|EMBL:AXG18990.1},
C7B06_02290 {ECO:0000313|EMBL:PSY81747.1},
C7B07_03930 {ECO:0000313|EMBL:PSZ22501.1},
C9025_17620 {ECO:0000313|EMBL:TJN70511.1},
C9077_19550 {ECO:0000313|EMBL:TJL17078.1},
C9078_12950 {ECO:0000313|EMBL:TJL30977.1},
C9083_21590 {ECO:0000313|EMBL:TJK89817.1},
C9212_13125 {ECO:0000313|EMBL:TJE76204.1},
C9Y80_10480 {ECO:0000313|EMBL:TJU31619.1},
C9Y95_17520 {ECO:0000313|EMBL:TJT61912.1},
C9Z12_18550 {ECO:0000313|EMBL:TJS94158.1},
CDC27_10055 {ECO:0000313|EMBL:AUX64452.1},
CDL37_00765 {ECO:0000313|EMBL:OXK54204.1},
CI694_25210 {ECO:0000313|EMBL:OYI43930.1},
CIJ94_05515 {ECO:0000313|EMBL:OZX97297.1},
COD46_23180 {ECO:0000313|EMBL:PBR50046.1},
CQP61_17160 {ECO:0000313|EMBL:AYW31046.1},
CRD98_26150 {ECO:0000313|EMBL:RFQ64179.1},
D2188_01360 {ECO:0000313|EMBL:RJF05114.1},
D6W60_25270 {ECO:0000313|EMBL:MMG62431.1},
D9D20_21030 {ECO:0000313|EMBL:MGD92361.1},
D9D43_06110 {ECO:0000313|EMBL:MGE13169.1},
D9H68_20750 {ECO:0000313|EMBL:MIC26275.1},
D9H70_25730 {ECO:0000313|EMBL:MHP18178.1},
D9I87_15275 {ECO:0000313|EMBL:MIA49483.1},
DEN89_24995 {ECO:0000313|EMBL:TFY28177.1},
DEO04_05510 {ECO:0000313|EMBL:TFX47052.1},
DL800_09215 {ECO:0000313|EMBL:AWS36017.1},
DNQ41_14245 {ECO:0000313|EMBL:AWV11365.1},
DQE83_22775 {ECO:0000313|EMBL:RAX32904.1},
DTL43_21780 {ECO:0000313|EMBL:RDA34553.1},
DTM25_06080 {ECO:0000313|EMBL:RCZ87495.1},
DU321_04440 {ECO:0000313|EMBL:RRL50198.1},
DXT73_20690 {ECO:0000313|EMBL:TGD62953.1},
E2134_24005 {ECO:0000313|EMBL:TEV05223.1},
E2135_17195 {ECO:0000313|EMBL:TEV31560.1},
E2855_02503 {ECO:0000313|EMBL:BBF48096.1},
E2863_02392 {ECO:0000313|EMBL:BBF53883.1},
E5P22_21380 {ECO:0000313|EMBL:TGJ55810.1},
E5S46_06650 {ECO:0000313|EMBL:TGI08689.1},
EB575_25290 {ECO:0000313|EMBL:MDT69877.1},
EC95NR1_00961 {ECO:0000313|EMBL:ART24836.1},
ED648_25045 {ECO:0000313|EMBL:MFA55141.1},
ELT20_21515 {ECO:0000313|EMBL:TFR24959.1},
ELV08_24970 {ECO:0000313|EMBL:TFP29980.1},
EPS97_16570 {ECO:0000313|EMBL:RXB27573.1},
EPT01_11070 {ECO:0000313|EMBL:RXB67488.1},
EQ825_23250 {ECO:0000313|EMBL:RXA48232.1},
ERS085379_01273 {ECO:0000313|EMBL:CTT47607.1},
ERS085386_05041 {ECO:0000313|EMBL:CTU20430.1},
ExPECSC038_01920 {ECO:0000313|EMBL:GCO24801.1},
EXX71_02385 {ECO:0000313|EMBL:RZW72873.1},
EXX78_21815 {ECO:0000313|EMBL:RZW26812.1},
EYD11_09165 {ECO:0000313|EMBL:QBF91063.1},
FNJ83_13175 {ECO:0000313|EMBL:QDM70954.1},
FQ915_04255 {ECO:0000313|EMBL:TWP67668.1},
FQR64_09390 {ECO:0000313|EMBL:QED51980.1},
FWK02_18105 {ECO:0000313|EMBL:TXT00347.1},
HmCmsJML079_02678 {ECO:0000313|EMBL:GCY57647.1},
HMPREF3040_01583 {ECO:0000313|EMBL:KXH00674.1},
HW43_13705 {ECO:0000313|EMBL:AIZ87477.1},
NCTC10082_04431 {ECO:0000313|EMBL:STE71544.1},
NCTC10418_03071 {ECO:0000313|EMBL:STE85461.1},
NCTC10767_03558 {ECO:0000313|EMBL:STC85269.1},
NCTC11022_01867 {ECO:0000313|EMBL:STI33514.1},
NCTC11126_04427 {ECO:0000313|EMBL:SPW54775.1},
NCTC11181_05650 {ECO:0000313|EMBL:STE77685.1},
NCTC12950_02263 {ECO:0000313|EMBL:STP46021.1},
NCTC8985_00529 {ECO:0000313|EMBL:STI75309.1},
NCTC9111_05933 {ECO:0000313|EMBL:SQD00206.1},
NCTC9703_00277 {ECO:0000313|EMBL:STK48850.1},
PGD_01271 {ECO:0000313|EMBL:CDP71004.1},
PU06_24500 {ECO:0000313|EMBL:KHJ14403.1},
SAMEA3472043_00447 {ECO:0000313|EMBL:SQJ50208.1},
SAMEA3472055_03589 {ECO:0000313|EMBL:SQL29476.1},
SAMEA3472056_01268 {ECO:0000313|EMBL:SQK82585.1},
SAMEA3472070_00654 {ECO:0000313|EMBL:SQL08281.1},
SAMEA3472080_04213 {ECO:0000313|EMBL:SVF36439.1},
SAMEA3472090_03376 {ECO:0000313|EMBL:SRY23915.1},
SAMEA3472110_00060 {ECO:0000313|EMBL:SVF07432.1},
SAMEA3472112_00448 {ECO:0000313|EMBL:SVF08682.1},
SAMEA3752372_00752 {ECO:0000313|EMBL:SQO10558.1},
UN91_23615 {ECO:0000313|EMBL:KJW45163.1},
WQ89_10695 {ECO:0000313|EMBL:KNF80390.1};
Escherichia coli.
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
Enterobacteriaceae; Escherichia.
NCBI_TaxID=562 {ECO:0000313|EMBL:CTT47607.1, ECO:0000313|Proteomes:UP000040589};
[1] {ECO:0000313|EMBL:CDP71004.1, ECO:0000313|Proteomes:UP000028873}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=D6-117.07 {ECO:0000313|Proteomes:UP000028873}, and
D6-117_07.11 {ECO:0000313|EMBL:CDP71004.1};
Kempf F., Loux V., Germon P.;
"Genome sequence of four bovine mastitis-causing Escherichia coli
strains.";
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:KHJ14403.1, ECO:0000313|Proteomes:UP000030834}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CVM N33561PS {ECO:0000313|EMBL:KHJ14403.1,
ECO:0000313|Proteomes:UP000030834};
Tyson G.H., McDermott P.F., Li C., Tadesse D.A., Mukherjee S.,
Bodeis-Jones S., Kabera C., Gaines S.A., Loneragan G.H., Edrington T.S.,
Torrence M., Harhay D.M., Zhao S.;
"Whole-genome sequencing effectively predicts antimicrobial resistance
phenotypes of E. coli.";
Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AIZ87477.1, ECO:0000313|Proteomes:UP000030783}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=94-3024 {ECO:0000313|EMBL:AIZ87477.1,
ECO:0000313|Proteomes:UP000030783};
PubMed=25887577; DOI=10.1186/s12866-015-0413-9;
Yan X., Fratamico P.M., Bono J.L., Baranzoni G.M., Chen C.Y.;
"Genome sequencing and comparative genomics provides insights on the
evolutionary dynamics and pathogenic potential of different H-serotypes of
Shiga toxin-producing Escherichia coli O104.";
BMC Microbiol. 15:83-83(2015).
[4] {ECO:0000313|EMBL:KJW45163.1, ECO:0000313|Proteomes:UP000033371}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=St. Olav173 {ECO:0000313|EMBL:KJW45163.1,
ECO:0000313|Proteomes:UP000033371};
Gabrielsen C., Drablos F., Afset J.E.;
"Genome sequences of 11 non-O157 Shiga Toxin-Producing Escherichia coli
strains.";
Submitted (FEB-2015) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:AIZ87477.1}
NUCLEOTIDE SEQUENCE.
STRAIN=94-3024 {ECO:0000313|EMBL:AIZ87477.1};
Yan X., Fratamico P.M., Bono J.L., Baranzoni G., Tebbs R., O'Connell C.;
"Escherichia coli O104:H21 Montana milk outbreak str. 93-3024.";
Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:KNZ97201.1, ECO:0000313|Proteomes:UP000036728}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=INSLA289 {ECO:0000313|EMBL:KNZ97201.1,
ECO:0000313|Proteomes:UP000036728};
Jones-Dias D., Manageiro V., Sampaio D.A., Vieira L., Canica M.;
"Draft genome sequence of a pathogenic ST57 Escherichia coli from poultry
carrying twelve acquired antibiotic resistance genes.";
Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
[7] {ECO:0000313|EMBL:KNF80390.1, ECO:0000313|Proteomes:UP000036812}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CFSAN026817 {ECO:0000313|EMBL:KNF80390.1,
ECO:0000313|Proteomes:UP000036812};
Gonzalez-Escalona N., Toro M., Timme R., Payne J.;
"Genome sequences of 64 non-O157:H7 Shiga toxin-producing Escherichia coli
strains.";
Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:CTT47607.1}
NUCLEOTIDE SEQUENCE.
STRAIN=400654_aEPEC {ECO:0000313|EMBL:CTU20430.1}, and
702161 {ECO:0000313|EMBL:CTT47607.1};
Rikkerink E.H.A., Fineran P.C.;
"Complete DNA Sequence of Pseudomonas syringae pv. actinidiae, the Causal
Agent of Kiwifruit Canker Disease.";
Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|Proteomes:UP000040589, ECO:0000313|Proteomes:UP000042887}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=400654_aEPEC {ECO:0000313|Proteomes:UP000042887}, and
702161 {ECO:0000313|Proteomes:UP000040589};
Pathogen Informatics;
Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|Proteomes:UP000076304}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=STEC 309 {ECO:0000313|Proteomes:UP000076304};
Shamseldin A., Moawad H., Abd El-Rahim W.M., Sadowsky M.J.;
Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
[11] {ECO:0000313|EMBL:KYV68606.1, ECO:0000313|Proteomes:UP000076304}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=STEC 309 {ECO:0000313|EMBL:KYV68606.1,
ECO:0000313|Proteomes:UP000076304};
PubMed=27058887;
Ferdous M., Friedrich A.W., Grundmann H., de Boer R.F., Croughs P.D.,
Islam M.A., Kluytmans-van den Bergh M.F., Kooistra-Smid A.M., Rossen J.W.;
"Molecular characterization and phylogeny of Shiga toxin-producing
Escherichia coli isolates obtained from two Dutch regions using whole
genome sequencing.";
Clin. Microbiol. Infect. 22:642-642(2016).
[12] {ECO:0000313|EMBL:OEI66394.1, ECO:0000313|Proteomes:UP000095183}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=EPEC 2827 {ECO:0000313|EMBL:OEI66394.1,
ECO:0000313|Proteomes:UP000095183};
Ferdous M., Kooistra-Smid A.M., Rossen J.W., Friedrich A.W.;
"Virulence, Antimicrobial resistance properties and Phylogenetic background
of E. coli O157 isolates that do not carry the H7 flagellar antigen.";
Front. Microbiol. 0:0-0(2016).
[13] {ECO:0000313|EMBL:KXH00674.1, ECO:0000313|Proteomes:UP000070450}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=JPH493 {ECO:0000313|EMBL:KXH00674.1,
ECO:0000313|Proteomes:UP000070450};
Wen L., He K., Yang H.;
Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
[14] {ECO:0000313|EMBL:OWD69214.1, ECO:0000313|Proteomes:UP000196822}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECOR04 {ECO:0000313|EMBL:OWD69214.1,
ECO:0000313|Proteomes:UP000196822};
Fischer W., Schubert S., Messerer M.;
"Investigation of Horizontal Gene Transfer of Pathogenicity Islands in
Escherichia coli using Next-Generation Sequencing.";
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[15] {ECO:0000313|EMBL:APT03265.1, ECO:0000313|Proteomes:UP000185422}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SLK172 {ECO:0000313|EMBL:APT03265.1,
ECO:0000313|Proteomes:UP000185422};
Bai L., Wang J., Hurley D., Yu Z., Wang L., Chen Q., Li J., Li F.,
Fanning S.;
"Characterisation of two large plasmids containing ESBL genes; a novel
disrupted mcr-1 gene and a lysogenized phage P-1 like sequence, cultured
from a human atypical enteropathogenic Escherichia coli (aEPEC) recovered
in China.";
Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
[16] {ECO:0000313|EMBL:OKB79100.1, ECO:0000313|Proteomes:UP000186715}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=N11-1317 {ECO:0000313|EMBL:OKB79100.1,
ECO:0000313|Proteomes:UP000186715};
Tasara T., Fierz L., Klumpp J., Schmidt H., Stephan R.;
"Draft genome sequences of five Shigatoxin-producing Escherichia coli
isolates harboring the new recently described Subtilase cytotoxin allelic
variant subAB2-3.";
Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
[17] {ECO:0000313|EMBL:OLR87354.1, ECO:0000313|Proteomes:UP000186204}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=204965 {ECO:0000313|EMBL:OLR87354.1,
ECO:0000313|Proteomes:UP000186204};
Hartl R., Kerschner H., Lepuschitz S., Ruppitsch W., Allerberger F.,
Apfalter P.;
"First detection of the mcr-1 gene in a multidrug-resistant Escherichia
coli isolate from an Austrian patient.";
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
[18] {ECO:0000313|EMBL:OXK54204.1, ECO:0000313|Proteomes:UP000214591}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=FC10225 {ECO:0000313|EMBL:OXK54204.1,
ECO:0000313|Proteomes:UP000214591};
PubMed=28686503;
Luo Y., Luo R., Ding H., Ren X., Luo H., Zhang Y., Ye L., Cui S.;
"Characterization of Carbapenem-Resistant Escherichia coli Isolates Through
the Whole-Genome Sequencing Analysis.";
Microb. Drug Resist. 0:0-0(2017).
[19] {ECO:0000313|EMBL:ONG27328.1, ECO:0000313|Proteomes:UP000188724}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ICBEC13AM {ECO:0000313|EMBL:ONG27328.1,
ECO:0000313|Proteomes:UP000188724};
Fernandes M.R., Sellera F.P., Esposito F., Cerdeira L., Lincopan N.;
"Draft genome sequence of Escherichia coli (ICBEC13AM) encoding mcr-1 gene
in marine environment.";
Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
[20] {ECO:0000313|EMBL:OUK85779.1, ECO:0000313|Proteomes:UP000195177}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SJRP/Ec42695 {ECO:0000313|EMBL:OUK85779.1};
Casella T., Cerdeira L., Lincopan N., Nogueira M.C.;
"Draft genome sequence of Escherichia coli strain SJRP/Ec42695.";
Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
[21] {ECO:0000313|Proteomes:UP000297723, ECO:0000313|Proteomes:UP000298432, ECO:0000313|Proteomes:UP000298440}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2469-1 {ECO:0000313|EMBL:TEZ16852.1,
ECO:0000313|Proteomes:UP000298432}, 2763-9 {ECO:0000313|EMBL:TFA65399.1,
ECO:0000313|Proteomes:UP000297723}, and
E20 {ECO:0000313|EMBL:TFA19111.1, ECO:0000313|Proteomes:UP000298440};
Gumpert H., Hartung Hansen K., Bortolaia V., Jana B., Westh H., Agerso Y.,
Guardabassi L.;
"Whole genome sequencing of CTX-M-14-producing Escherichia coli of animal
and human origin: insights into dissemination of blaCTX-M-14.";
Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
[22] {ECO:0000313|Proteomes:UP000197917}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Ec39590 {ECO:0000313|Proteomes:UP000197917};
Melo L.C., Boisson M.N., Cerdeira L., Saras E., Medaille C., Boulois H.-J.,
Madec J.-Y., Haenni M., Lincopan N.;
"Draft Genome Sequence of Escherichia coli Isolated from Cat Harboring
blaTEM-52b.";
Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
[23] {ECO:0000313|EMBL:AWR80034.1, ECO:0000313|Proteomes:UP000246203}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=H17 {ECO:0000313|EMBL:AWR80034.1,
ECO:0000313|Proteomes:UP000246203};
Zhao D.;
"complete nucleotide sequence analysis of plasmids from MCR-1 and KPC-2 co-
expressing Escherichia coli.";
Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
[24] {ECO:0000313|EMBL:ART24836.1, ECO:0000313|Proteomes:UP000250208}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=95NR1 {ECO:0000313|EMBL:ART24836.1,
ECO:0000313|Proteomes:UP000250208};
Forde B.M., McAllister L.J., Paton J.C., Paton A.W., Beatson S.A.;
"PacBio sequencing reveals differential patterns of methylation in wo
O111:H- Shiga toxigenic Escherichia coli isolates from a historic hemplytic
uremic syndrome outbrerak in Australia.";
Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
[25] {ECO:0000313|EMBL:RBV92817.1, ECO:0000313|Proteomes:UP000252942}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CVAST0582 {ECO:0000313|EMBL:RBV92817.1,
ECO:0000313|Proteomes:UP000252942};
Johnson T.J., Johnson J.R.;
"Within host evolution of Escherichia coli isolates within the fecal flora
of colonized patients.";
Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
[26] {ECO:0000313|EMBL:AUX64452.1, ECO:0000313|Proteomes:UP000323341}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Combat11I9 {ECO:0000313|EMBL:AUX64452.1,
ECO:0000313|Proteomes:UP000323341};
Ho P.-L., Liu C., Lau A., Lai E.L.Y., Chow K.-H., Tse C.W.-S., Que T.-L.;
Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
[27] {ECO:0000313|EMBL:RFQ64179.1, ECO:0000313|Proteomes:UP000258149}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=2015C-5140 {ECO:0000313|EMBL:RFQ64179.1,
ECO:0000313|Proteomes:UP000258149};
Harrand S.;
"Produce relevant pathogen strain collection.";
Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
[28] {ECO:0000313|EMBL:OZX97297.1, ECO:0000313|Proteomes:UP000216687}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=EC-117-4-3 {ECO:0000313|EMBL:OZX97297.1,
ECO:0000313|Proteomes:UP000216687};
Gumpert H., Kubicek-Sutherland J.Z., Porse A., Karami N., Munck C.,
Linkevicius M., Adlerberth I., Wold A., Andersson D.I., Sommer M.O.A.;
"Transfer and persistence of a multi-drug resistance plasmid in situ of the
infant gut microbiota in the absence of antibiotic treatment.";
Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
[29] {ECO:0000313|EMBL:OYI43930.1, ECO:0000313|Proteomes:UP000215008}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECSW+04 {ECO:0000313|EMBL:OYI43930.1,
ECO:0000313|Proteomes:UP000215008};
Fouts D., Sutton G., Nguyen K., Thamlikitkul V.;
Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
[30] {ECO:0000313|EMBL:PBR50046.1, ECO:0000313|Proteomes:UP000217968}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=F328 {ECO:0000313|EMBL:PBR50046.1,
ECO:0000313|Proteomes:UP000217968};
Baranzoni G.M., Fratamico P.M., Reichenberger E.R., Kim G.-H., Funk J.,
Manning S., Bosilevac J.M.;
"Draft genomes of Shiga toxin-producing E. coli isolated from swine and
other sources.";
Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
[31] {ECO:0000313|Proteomes:UP000236587}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECONIH5 {ECO:0000313|Proteomes:UP000236587};
PubMed=29437920;
NISC Comparative Sequencing Program;
Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
"Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
Bacterial Plasmids Conferring Carbapenem Resistance.";
MBio 9:e02011-17(2018).
[32] {ECO:0000313|EMBL:AUV33619.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECONIH5 {ECO:0000313|EMBL:AUV33619.1};
NISC Comparative Sequencing Program;
Weingarten R.A., Johnson R.C., Conlan S., Ramsburg A.M., Dekker J.P.,
Lau A.F., Khil P., Odom R.T., Deming C., Park M., Thomas P.J.,
Henderson D.K., Palmore T.N., Segre J.A., Frank K.M.;
"Genomic Analysis of Hospital Plumbing Reveals Diverse Reservoir of
Bacterial Plasmids Conferring Carbapenem Resistance.";
Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
[33] {ECO:0000313|Proteomes:UP000236587}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECONIH5 {ECO:0000313|Proteomes:UP000236587};
Segre J.A., Mullikin J.;
Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
[34] {ECO:0000313|EMBL:AUV33619.1}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECONIH5 {ECO:0000313|EMBL:AUV33619.1};
Gaut B.S., Morton B.R., Clegg M.T., Duvall M.R.;
Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
[35] {ECO:0000313|EMBL:PQP07737.1, ECO:0000313|Proteomes:UP000238978}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ESY002 {ECO:0000313|EMBL:PQP07737.1,
ECO:0000313|Proteomes:UP000238978};
Hu X.;
"Dissemination of NDM-5-producing Escherichia coli via the IncX3 Plasmid
from China.";
Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
[36] {ECO:0000313|EMBL:PQP29065.1, ECO:0000313|Proteomes:UP000239819}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 23545-Br23R2 {ECO:0000313|Proteomes:UP000239819}, and
NCDC 62-57 NalR-Br23R2 {ECO:0000313|EMBL:PQP29065.1};
Boeckman J.X., Newkirk H., Callaway T., Gill J.;
"Piglet Model for Environmental Enteropathy.";
Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
[37] {ECO:0000313|EMBL:AXG18990.1, ECO:0000313|Proteomes:UP000252837}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CFSAN064035 {ECO:0000313|EMBL:AXG18990.1,
ECO:0000313|Proteomes:UP000252837};
Hoffmann M., Pedersen S.K., Sanchez M., Pettengill J.B., Hendriksen R.S.;
"Genome assemblies for Global Microbial Identifier (GMI) Proficiency
Testing reference strains.";
Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
[38] {ECO:0000313|EMBL:PSY81747.1, ECO:0000313|Proteomes:UP000240829, ECO:0000313|Proteomes:UP000241957}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=14696-7 {ECO:0000313|EMBL:PSY81747.1,
ECO:0000313|Proteomes:UP000240829}, and
15692-2 {ECO:0000313|EMBL:PSZ22501.1, ECO:0000313|Proteomes:UP000241957};
Whitehouse C.A., Lacher D.W., Mammel M.K., Barnaba T., Lorch J.M.;
"Whole Genome Sequencing of Escherichia coli isolates from wildlife.";
Submitted (MAR-2018) to the EMBL/GenBank/DDBJ databases.
[39] {ECO:0000313|Proteomes:UP000299191, ECO:0000313|Proteomes:UP000299926, ECO:0000313|Proteomes:UP000300017}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECSC038 {ECO:0000313|EMBL:GCO24801.1,
ECO:0000313|Proteomes:UP000300926}, HH-P001 {ECO:0000313|EMBL:GCR80410.1,
ECO:0000313|Proteomes:UP000301935}, JML079 {ECO:0000313|EMBL:GCY57647.1,
ECO:0000313|Proteomes:UP000302283}, KK-P061 {ECO:0000313|EMBL:GDH29133.1,
ECO:0000313|Proteomes:UP000303027}, KS-P015 {ECO:0000313|EMBL:GDL47944.1,
ECO:0000313|Proteomes:UP000304709}, KS-P045 {ECO:0000313|EMBL:GDL76575.1,
ECO:0000313|Proteomes:UP000302568}, KS-P058 {ECO:0000313|EMBL:GDL45803.1,
ECO:0000313|Proteomes:UP000303301}, KS-P067 {ECO:0000313|EMBL:GDO47595.1,
ECO:0000313|Proteomes:UP000303418}, KS-P083 {ECO:0000313|EMBL:GDM74344.1,
ECO:0000313|Proteomes:UP000303870}, NS-P006 {ECO:0000313|EMBL:GDP37344.1,
ECO:0000313|Proteomes:UP000300017}, NS-P007 {ECO:0000313|EMBL:GDP81692.1,
ECO:0000313|Proteomes:UP000300652}, NS-P047 {ECO:0000313|EMBL:GDR52300.1,
ECO:0000313|Proteomes:UP000299926}, and
SI-NP011 {ECO:0000313|EMBL:GDR90575.1, ECO:0000313|Proteomes:UP000299191};
Arimizu Y., Ogura Y.;
"Large scale genomics of bovine and human commensal E. coli to reveal the
emerging process of EHEC.";
Submitted (APR-2018) to the EMBL/GenBank/DDBJ databases.
[40] {ECO:0000313|EMBL:AWS36017.1, ECO:0000313|Proteomes:UP000247985}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SD134209 {ECO:0000313|EMBL:AWS36017.1,
ECO:0000313|Proteomes:UP000247985};
Parker C.T., Huynh S., Bono J., Miller W., Brandl M., Cooley M.;
"Complete Genome Sequences of Three O111:H8 Shiga toxin-producing
Escherichia coli Strains Exhibiting an Aggregation Phenotype.";
Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
[41] {ECO:0000313|EMBL:AWV11365.1, ECO:0000313|Proteomes:UP000249874}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=51008369SK1 {ECO:0000313|EMBL:AWV11365.1,
ECO:0000313|Proteomes:UP000249874};
Zurfluh K., Stevens M.J., Perterhans S., Stephan R.;
"Complete and assembled genome sequence of a carbapenem resistant
Escherichia coli 51008369SK1 Isolated from wounded dog.";
Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
[42] {ECO:0000313|EMBL:OWS83388.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Ec39590 {ECO:0000313|EMBL:OWS83388.1};
Melo L.C., Boisson M.N., Cerdeira L., Saras E., Medaille C., Boulois H.-J.,
Madec J.-Y., Haenni M., Lincopan N.;
"Draft Genome Sequence of Escherichia coli Isolated from Cat Harboring
blaTEM-52b.";
Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
[43] {ECO:0000313|Proteomes:UP000250397, ECO:0000313|Proteomes:UP000250541, ECO:0000313|Proteomes:UP000250561}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NCTC10082 {ECO:0000313|EMBL:STE71544.1,
ECO:0000313|Proteomes:UP000255164}, NCTC10418 {ECO:0000313|EMBL:STE85461.1,
ECO:0000313|Proteomes:UP000255460}, NCTC10767 {ECO:0000313|EMBL:STC85269.1,
ECO:0000313|Proteomes:UP000254647}, NCTC11022 {ECO:0000313|EMBL:STI33514.1,
ECO:0000313|Proteomes:UP000255078}, NCTC11126 {ECO:0000313|EMBL:SPW54775.1,
ECO:0000313|Proteomes:UP000250561}, NCTC11181 {ECO:0000313|EMBL:STE77685.1,
ECO:0000313|Proteomes:UP000254219}, NCTC12950 {ECO:0000313|EMBL:STP46021.1,
ECO:0000313|Proteomes:UP000255454}, NCTC8985 {ECO:0000313|EMBL:STI75309.1,
ECO:0000313|Proteomes:UP000254405}, NCTC9111 {ECO:0000313|EMBL:SQD00206.1,
ECO:0000313|Proteomes:UP000250781}, NCTC9703 {ECO:0000313|EMBL:STK48850.1,
ECO:0000313|Proteomes:UP000255181}, VREC0150 {ECO:0000313|EMBL:SQJ50208.1,
ECO:0000313|Proteomes:UP000295432}, VREC0212 {ECO:0000313|EMBL:SQL08281.1,
ECO:0000313|Proteomes:UP000251885}, VREC0217 {ECO:0000313|EMBL:SVF36439.1,
ECO:0000313|Proteomes:UP000258756}, VREC0279 {ECO:0000313|EMBL:SRY23915.1,
ECO:0000313|Proteomes:UP000250397}, VREC0288 {ECO:0000313|EMBL:SVF07432.1,
ECO:0000313|Proteomes:UP000257490}, VREC0289 {ECO:0000313|EMBL:SVF08682.1,
ECO:0000313|Proteomes:UP000257276}, VREC0353 {ECO:0000313|EMBL:SQO10558.1,
ECO:0000313|Proteomes:UP000250541}, VREC0404 {ECO:0000313|EMBL:SQL29476.1,
ECO:0000313|Proteomes:UP000251031}, and
VREC0406 {ECO:0000313|EMBL:SQK82585.1, ECO:0000313|Proteomes:UP000250650};
Pathogen Informatics;
Doyle S.;
Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
[44] {ECO:0000313|EMBL:RAX32904.1, ECO:0000313|Proteomes:UP000251407}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HPCN26 {ECO:0000313|EMBL:RAX32904.1,
ECO:0000313|Proteomes:UP000251407};
Zhirakovskaya E.;
Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
[45] {ECO:0000313|EMBL:BBF48096.1, ECO:0000313|Proteomes:UP000272738, ECO:0000313|Proteomes:UP000281900}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=E2855 {ECO:0000313|EMBL:BBF48096.1,
ECO:0000313|Proteomes:UP000272738}, and
E2863 {ECO:0000313|EMBL:BBF53883.1, ECO:0000313|Proteomes:UP000281900};
Kusumoto M., Misumi W., Ogura Y., Hayashi T., Akiba M.;
"Genomic analysis of colistin resistant EHEC isolated from cattle in
Japan.";
Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
[46] {ECO:0000313|EMBL:RCZ87495.1, ECO:0000313|Proteomes:UP000252917, ECO:0000313|Proteomes:UP000253687}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AVC111 {ECO:0000313|EMBL:RCZ87495.1,
ECO:0000313|Proteomes:UP000252917}, and
AVC211 {ECO:0000313|EMBL:RDA34553.1, ECO:0000313|Proteomes:UP000253687};
Cummins M.L., Reid C.J., Roy Chowdhury P., Bushell R., Esbert N.,
Tivendale K.A., Noormohammadi A.H., Islam S., Marenda M.S., Browning G.F.,
Markham P.F., Djordjevic S.P.;
"Whole Genome Sequence Analysis of Avian Pathogenic E. coli - An Australian
Perspective.";
Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
[47] {ECO:0000313|EMBL:RJF05114.1, ECO:0000313|Proteomes:UP000285356}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=GT1 {ECO:0000313|EMBL:RJF05114.1,
ECO:0000313|Proteomes:UP000285356};
Manga I., Hasman H., Smidkova J., Medvecky M., Dolejska M., Cizek A.;
"Fecal carriage and whole genome sequencing-assisted characterization of
CMY-2 beta-lactamase-producing Escherichia coli in calves at Czech dairy
cow farm.";
Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
[48] {ECO:0000313|Proteomes:UP000270250, ECO:0000313|Proteomes:UP000272336, ECO:0000313|Proteomes:UP000273909}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CVM N17EC0014 {ECO:0000313|EMBL:MGD92361.1,
ECO:0000313|Proteomes:UP000270250},
CVM N17EC0060 {ECO:0000313|EMBL:MGE13169.1,
ECO:0000313|Proteomes:UP000272336},
CVM N17EC0942 {ECO:0000313|EMBL:MIC26275.1,
ECO:0000313|Proteomes:UP000273909},
CVM N17EC0946 {ECO:0000313|EMBL:MHP18178.1,
ECO:0000313|Proteomes:UP000280118}, and
CVM N17EC1181 {ECO:0000313|EMBL:MIA49483.1,
ECO:0000313|Proteomes:UP000281398};
NARMS: The National Antimicrobial Resistance Monitoring System;
Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
[49] {ECO:0000313|EMBL:MDT69877.1, ECO:0000313|Proteomes:UP000267732, ECO:0000313|Proteomes:UP000278687}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PNUSAE017471 {ECO:0000313|EMBL:MDT69877.1,
ECO:0000313|Proteomes:UP000278687},
PNUSAE018213 {ECO:0000313|EMBL:MFA55141.1,
ECO:0000313|Proteomes:UP000267732}, and
PNUSAE018507 {ECO:0000313|EMBL:MMG62431.1,
ECO:0000313|Proteomes:UP000273938};
PulseNet: The National Subtyping Network for Foodborne Disease Surveillance;
Tarr C.L., Trees E., Katz L.S., Carleton-Romer H.A., Stroika S.,
Kucerova Z., Roache K.F., Sabol A.L., Besser J., Gerner-Smidt P.;
Submitted (OCT-2018) to the EMBL/GenBank/DDBJ databases.
[50] {ECO:0000313|EMBL:AYW31046.1, ECO:0000313|Proteomes:UP000267155}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ECCNB12-2 {ECO:0000313|EMBL:AYW31046.1};
Chang J., Tang B.;
"Complete genome sequence of Escherichia coli strain ECCNB12-2.";
Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
[51] {ECO:0000313|EMBL:GCF99761.1, ECO:0000313|Proteomes:UP000300234, ECO:0000313|Proteomes:UP000301441}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=12-1BK {ECO:0000313|EMBL:GCF99761.1,
ECO:0000313|Proteomes:UP000300234}, and
28-1BK {ECO:0000313|EMBL:GCH08557.1, ECO:0000313|Proteomes:UP000301441};
Arimizu Y., Hayashi T., Ogura Y.;
"Draft genome sequence of commensal E.coli strains.";
Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
[52] {ECO:0000313|EMBL:RRL50198.1, ECO:0000313|Proteomes:UP000272662}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=UMB1727 {ECO:0000313|EMBL:RRL50198.1,
ECO:0000313|Proteomes:UP000272662};
Garretto A., Miller-Ensminger T., Wolfe A.J., Putonti C.;
"E. coli isolates of the female bladder.";
Submitted (NOV-2018) to the EMBL/GenBank/DDBJ databases.
[53] {ECO:0000313|Proteomes:UP000305613, ECO:0000313|Proteomes:UP000305624, ECO:0000313|Proteomes:UP000305646}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=FWSEC0027 {ECO:0000313|EMBL:TJU31619.1,
ECO:0000313|Proteomes:UP000308586}, FWSEC0044 {ECO:0000313|EMBL:TJT61912.1,
ECO:0000313|Proteomes:UP000308580}, FWSEC0062 {ECO:0000313|EMBL:TJS94158.1,
ECO:0000313|Proteomes:UP000305613}, FWSEC0238 {ECO:0000313|EMBL:TJN70511.1,
ECO:0000313|Proteomes:UP000305646}, FWSEC0290 {ECO:0000313|EMBL:TJL17078.1,
ECO:0000313|Proteomes:UP000306428}, FWSEC0291 {ECO:0000313|EMBL:TJL30977.1,
ECO:0000313|Proteomes:UP000306475}, FWSEC0296 {ECO:0000313|EMBL:TJK89817.1,
ECO:0000313|Proteomes:UP000308607}, and
FWSEC0437 {ECO:0000313|EMBL:TJE76204.1, ECO:0000313|Proteomes:UP000305624};
Tyson S., Peterson C.-L., Olson A., Tyler S., Cabral J., Lynch T., Knox N.,
Van Domselaar G., Graham M.;
"Food and Water Safety Consortium.";
Submitted (DEC-2018) to the EMBL/GenBank/DDBJ databases.
[54] {ECO:0000313|EMBL:TFX47052.1, ECO:0000313|Proteomes:UP000297289, ECO:0000313|Proteomes:UP000298228}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=30M {ECO:0000313|EMBL:TFY28177.1,
ECO:0000313|Proteomes:UP000298228}, and
E044-00 {ECO:0000313|EMBL:TFX47052.1, ECO:0000313|Proteomes:UP000297289};
PubMed=30924410; DOI=.1080/22221751.2019.1595985;
Montero D.A., Canto F.D., Velasco J., Colello R., Padola N.L.,
Salazar J.C., Martin C.S., Onate A., Blanco J., Rasko D.A., Contreras C.,
Puente J.L., Scheutz F., Franz E., Vidal R.M.;
"Cumulative acquisition of pathogenicity islands has shaped virulence
potential and contributed to the emergence of LEE-negative Shiga toxin-
producing Escherichia coli strains.";
Emerg. Microbes Infect. 8:486-502(2019).
[55] {ECO:0000313|EMBL:TGD62953.1, ECO:0000313|Proteomes:UP000297553}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SE573 {ECO:0000313|EMBL:TGD62953.1,
ECO:0000313|Proteomes:UP000297553};
PubMed=30948755; DOI=.1038/s41598-019-42122-z;
Bai X., Zhang J., Ambikan A., Jernberg C., Ehricht R., Scheutz F.,
Xiong Y., Matussek A.;
"Molecular Characterization and Comparative Genomics of Clinical Hybrid
Shiga Toxin-Producing and Enterotoxigenic Escherichia coli (STEC/ETEC)
Strains in Sweden.";
Sci. Rep. 9:5619-5619(2019).
[56] {ECO:0000313|EMBL:RXB27573.1, ECO:0000313|Proteomes:UP000290456, ECO:0000313|Proteomes:UP000290652}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=49_rectal {ECO:0000313|EMBL:RXB27573.1,
ECO:0000313|Proteomes:UP000290652}, and
52_rectal {ECO:0000313|EMBL:RXB67488.1, ECO:0000313|Proteomes:UP000290456};
Potter R., Zou Z., Henderson J., Dantas G.;
"Genomic analysis of febrile catheter-associated UTI E. coli isolates.";
Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
[57] {ECO:0000313|EMBL:RXA48232.1, ECO:0000313|Proteomes:UP000290592}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=EC117 {ECO:0000313|EMBL:RXA48232.1,
ECO:0000313|Proteomes:UP000290592};
Yasir M.;
"Genomic characterization of multidrug resistant E. coli from western Saudi
Arabia.";
Submitted (JAN-2019) to the EMBL/GenBank/DDBJ databases.
[58] {ECO:0000313|EMBL:RZW26812.1, ECO:0000313|Proteomes:UP000292161, ECO:0000313|Proteomes:UP000293065}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=EC_75 {ECO:0000313|EMBL:RZW72873.1,
ECO:0000313|Proteomes:UP000293065}, and
EC_82 {ECO:0000313|EMBL:RZW26812.1, ECO:0000313|Proteomes:UP000292161};
Rafique M., Potter R.F., D'Souza A.W., Ferreiro A., Rahim A., Malik A.,
Siddique N., Abbas M.A., Burnham C.-A.D., Ali N., Dantas G.;
"Comparative genomic analysis of E. coli from chickens in Pakistan.";
Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
[59] {ECO:0000313|EMBL:TFP29980.1, ECO:0000313|Proteomes:UP000297379, ECO:0000313|Proteomes:UP000297676}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=URMC_149 {ECO:0000313|EMBL:TFR24959.1,
ECO:0000313|Proteomes:UP000297676}, and
URMC_189 {ECO:0000313|EMBL:TFP29980.1, ECO:0000313|Proteomes:UP000297379};
Mostafa H., Pecora N.;
"ESBL Survelliance.";
Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
[60] {ECO:0000313|EMBL:QBF91063.1, ECO:0000313|Proteomes:UP000290731}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=WCHEC025970 {ECO:0000313|EMBL:QBF91063.1,
ECO:0000313|Proteomes:UP000290731};
Long H., Feng Y., Zong Z.;
"The complete genome of Escherichia coli strain WCHEC025970.";
Submitted (FEB-2019) to the EMBL/GenBank/DDBJ databases.
[61] {ECO:0000313|EMBL:TEV05223.1, ECO:0000313|Proteomes:UP000297247, ECO:0000313|Proteomes:UP000298063}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=1525k {ECO:0000313|EMBL:TEV05223.1,
ECO:0000313|Proteomes:UP000298063}, and
1526k {ECO:0000313|EMBL:TEV31560.1, ECO:0000313|Proteomes:UP000297247};
Nesporova K., Jamborova I., Valcek A., Medvecky M., Literak I.,
Dolejska M.;
"Frequent association of plasmid-mediated mcr-5 with ESBL/AmpC genes in
Escherichia coli isolates from healthy chickens in Paraguay.";
Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
[62] {ECO:0000313|EMBL:TGI08689.1, ECO:0000313|Proteomes:UP000297283}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=BX1S5 {ECO:0000313|EMBL:TGI08689.1,
ECO:0000313|Proteomes:UP000297283};
Xu A., Liu Y., Niemira B., Scullen O., Boyd G., Ream A., Sommers C.;
"Draft Genome Sequence Of Multi-Drug Resistant Escherichia coli Isolated
From Retail Fresh Herb Products.";
Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
[63] {ECO:0000313|EMBL:TGJ55810.1, ECO:0000313|Proteomes:UP000298006}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=KCJK7105 {ECO:0000313|EMBL:TGJ55810.1,
ECO:0000313|Proteomes:UP000298006};
Teng L.;
"ESBL E. coli from beef cattle.";
Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
[64] {ECO:0000313|EMBL:QDM70954.1, ECO:0000313|Proteomes:UP000315727}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=69 {ECO:0000313|EMBL:QDM70954.1, ECO:0000313|Proteomes:UP000315727};
Song W.;
"Environmental and genetic determinants of plasmid mobility in pathogenic
Escherichia coli.";
Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
[65] {ECO:0000313|EMBL:TWP67668.1, ECO:0000313|Proteomes:UP000319448}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=EC1662 {ECO:0000313|EMBL:TWP67668.1,
ECO:0000313|Proteomes:UP000319448};
Han J., Alotaibi K., Khan A.;
"Genome sequences of Shiga Toxin producing Escherichia coli that causes
food-borne disease from food, clinical and environmental samples and
assembly.";
Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
[66] {ECO:0000313|EMBL:QDM70954.1, ECO:0000313|Proteomes:UP000315727}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=69 {ECO:0000313|EMBL:QDM70954.1, ECO:0000313|Proteomes:UP000315727};
Bethke J.H., Davidovich A., Cheng L., Lopatkin A.J., Thaden J.T.,
Fowler V.G.Jr., Xiao M., You L.;
Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
[67] {ECO:0000313|EMBL:QED51980.1, ECO:0000313|Proteomes:UP000321916}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LD91-1 {ECO:0000313|EMBL:QED51980.1,
ECO:0000313|Proteomes:UP000321916};
Li R., Wang Z.;
"Reorganization of mcr-1-bearing large MDR plasmids resolved by nanopore
sequencing.";
Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
[68] {ECO:0000313|EMBL:TXT00347.1, ECO:0000313|Proteomes:UP000321461}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=3_77_5 {ECO:0000313|EMBL:TXT00347.1,
ECO:0000313|Proteomes:UP000321461};
Siniagina M.N., Markelova M.I., Laikov A.V., Boulygina E.A.,
Khusnutdinova D.R., Kharchenko A., Grigoryeva T.V.;
"Whole genome analysis of cultivated E. coli strains isolated from CD
patients and healthy donors.";
Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
[69] {ECO:0000313|EMBL:QED51980.1, ECO:0000313|Proteomes:UP000321916}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LD91-1 {ECO:0000313|EMBL:QED51980.1,
ECO:0000313|Proteomes:UP000321916};
Lu X.;
Submitted (AUG-2019) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Protein and nucleotide deglycase that catalyzes the
deglycation of the Maillard adducts formed between amino groups of
proteins or nucleotides and reactive carbonyl groups of glyoxals. Thus,
functions as a protein deglycase that repairs methylglyoxal-and
glyoxal-glycated proteins, and releases repaired proteins and lactate
or glycolate, respectively. Deglycates cysteine, arginine and lysine
residues in proteins, and thus reactivates these proteins by reversing
glycation by glyoxals. Acts on early glycation intermediates
(hemithioacetals and aminocarbinols), preventing the formation of
Schiff bases and advanced glycation endproducts (AGE). Also functions
as a nucleotide deglycase able to repair glycated guanine in the free
nucleotide pool (GTP, GDP, GMP, dGTP) and in DNA and RNA. Is thus
involved in a major nucleotide repair system named guanine glycation
repair (GG repair), dedicated to reversing methylglyoxal and glyoxal
damage via nucleotide sanitization and direct nucleic acid repair.
Plays an important role in protecting cells from carbonyl stress.
{ECO:0000256|HAMAP-Rule:MF_01046}.
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxoethyl)-GDP = GDP + glycolate +
H(+); Xref=Rhea:RHEA:57264, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:29805, ChEBI:CHEBI:58189, ChEBI:CHEBI:141574;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxoethyl)-GMP = glycolate + GMP +
H(+); Xref=Rhea:RHEA:57304, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:29805, ChEBI:CHEBI:58115, ChEBI:CHEBI:141576;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxoethyl)-GTP = glycolate + GTP +
H(+); Xref=Rhea:RHEA:57252, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:29805, ChEBI:CHEBI:37565, ChEBI:CHEBI:141571;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxoethyl)-dGTP = dGTP + glycolate +
H(+); Xref=Rhea:RHEA:57248, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:29805, ChEBI:CHEBI:61429, ChEBI:CHEBI:141572;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxopropyl)-GDP = GDP + H(+) + lactate;
Xref=Rhea:RHEA:57260, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:24996, ChEBI:CHEBI:58189, ChEBI:CHEBI:141573;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxopropyl)-GMP = GMP + H(+) + lactate;
Xref=Rhea:RHEA:57268, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:24996, ChEBI:CHEBI:58115, ChEBI:CHEBI:141575;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxopropyl)-GTP = GTP + H(+) + lactate;
Xref=Rhea:RHEA:57256, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:24996, ChEBI:CHEBI:37565, ChEBI:CHEBI:141570;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(2)-(1-hydroxy-2-oxopropyl)-dGTP = dGTP + H(+) +
lactate; Xref=Rhea:RHEA:57244, ChEBI:CHEBI:15377, ChEBI:CHEBI:15378,
ChEBI:CHEBI:24996, ChEBI:CHEBI:61429, ChEBI:CHEBI:141569;
Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(6)-(1-hydroxy-2-oxoethyl)-L-lysyl-[protein] =
glycolate + H(+) + L-lysyl-[protein]; Xref=Rhea:RHEA:57192,
Rhea:RHEA-COMP:9752, Rhea:RHEA-COMP:14845, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:29969,
ChEBI:CHEBI:141554; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(6)-(1-hydroxy-2-oxopropyl)-L-lysyl-[protein] = H(+) +
L-lysyl-[protein] + lactate; Xref=Rhea:RHEA:49552, Rhea:RHEA-
COMP:9752, Rhea:RHEA-COMP:12429, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:24996, ChEBI:CHEBI:29969,
ChEBI:CHEBI:131709; EC=3.5.1.124; Evidence={ECO:0000256|HAMAP-
Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(omega)-(1-hydroxy-2-oxoethyl)-L-arginyl-[protein] =
glycolate + H(+) + L-arginyl-[protein]; Xref=Rhea:RHEA:57188,
Rhea:RHEA-COMP:10532, Rhea:RHEA-COMP:14844, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:29965,
ChEBI:CHEBI:141553; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + N(omega)-(1-hydroxy-2-oxopropyl)-L-arginyl-[protein] =
H(+) + L-arginyl-[protein] + lactate; Xref=Rhea:RHEA:49548,
Rhea:RHEA-COMP:10532, Rhea:RHEA-COMP:12428, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:24996, ChEBI:CHEBI:29965,
ChEBI:CHEBI:131708; EC=3.5.1.124; Evidence={ECO:0000256|HAMAP-
Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + S-(1-hydroxy-2-oxoethyl)-L-cysteinyl-[protein] =
glycolate + H(+) + L-cysteinyl-[protein]; Xref=Rhea:RHEA:57196,
Rhea:RHEA-COMP:10131, Rhea:RHEA-COMP:14846, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:29950,
ChEBI:CHEBI:141555; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=H2O + S-(1-hydroxy-2-oxopropyl)-L-cysteinyl-[protein] = H(+) +
L-cysteinyl-[protein] + lactate; Xref=Rhea:RHEA:49556, Rhea:RHEA-
COMP:10131, Rhea:RHEA-COMP:12430, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:24996, ChEBI:CHEBI:29950,
ChEBI:CHEBI:131710; EC=3.5.1.124; Evidence={ECO:0000256|HAMAP-
Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=an N(2)-(1-hydroxy-2-oxoethyl)-2'-deoxyguanosine in DNA + H2O
= a 2'-deoxyguanosine in DNA + glycolate + H(+);
Xref=Rhea:RHEA:57296, Rhea:RHEA-COMP:11367, Rhea:RHEA-COMP:14857,
ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:29805,
ChEBI:CHEBI:85445, ChEBI:CHEBI:141579; Evidence={ECO:0000256|HAMAP-
Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=an N(2)-(1-hydroxy-2-oxoethyl)-guanosine in RNA + H2O = a
guanosine in RNA + glycolate + H(+); Xref=Rhea:RHEA:57292, Rhea:RHEA-
COMP:14855, Rhea:RHEA-COMP:14859, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:29805, ChEBI:CHEBI:74269,
ChEBI:CHEBI:141581; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=an N(2)-(1-hydroxy-2-oxopropyl)-2'-deoxyguanosine in DNA + H2O
= a 2'-deoxyguanosine in DNA + H(+) + lactate; Xref=Rhea:RHEA:57300,
Rhea:RHEA-COMP:11367, Rhea:RHEA-COMP:14856, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:24996, ChEBI:CHEBI:85445,
ChEBI:CHEBI:141578; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- CATALYTIC ACTIVITY:
Reaction=an N(2)-(1-hydroxy-2-oxopropyl)-guanosine in RNA + H2O = a
guanosine in RNA + H(+) + lactate; Xref=Rhea:RHEA:57288, Rhea:RHEA-
COMP:14855, Rhea:RHEA-COMP:14858, ChEBI:CHEBI:15377,
ChEBI:CHEBI:15378, ChEBI:CHEBI:24996, ChEBI:CHEBI:74269,
ChEBI:CHEBI:141580; Evidence={ECO:0000256|HAMAP-Rule:MF_01046};
-!- SUBUNIT: Homodimer. {ECO:0000256|HAMAP-Rule:MF_01046}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01046}.
-!- INDUCTION: By heat shock. {ECO:0000256|HAMAP-Rule:MF_01046}.
-!- SIMILARITY: Belongs to the peptidase C56 family. HchA subfamily.
{ECO:0000256|HAMAP-Rule:MF_01046}.
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EMBL; CP009106; AIZ87477.1; -; Genomic_DNA.
EMBL; CP017631; APT03265.1; -; Genomic_DNA.
EMBL; CP021339; ART24836.1; -; Genomic_DNA.
EMBL; CP026202; AUV33619.1; -; Genomic_DNA.
EMBL; CP021726; AUX64452.1; -; Genomic_DNA.
EMBL; CP021193; AWR80034.1; -; Genomic_DNA.
EMBL; CP029692; AWS36017.1; -; Genomic_DNA.
EMBL; CP029973; AWV11365.1; -; Genomic_DNA.
EMBL; CP031134; AXG18990.1; -; Genomic_DNA.
EMBL; CP033635; AYW31046.1; -; Genomic_DNA.
EMBL; AP018796; BBF48096.1; -; Genomic_DNA.
EMBL; AP018802; BBF53883.1; -; Genomic_DNA.
EMBL; CCCP010000012; CDP71004.1; -; Genomic_DNA.
EMBL; HG976952; CDU38195.1; -; Genomic_DNA.
EMBL; CYBF01000007; CTT47607.1; -; Genomic_DNA.
EMBL; CYBM01000058; CTU20430.1; -; Genomic_DNA.
EMBL; BHZO01000014; GCF99761.1; -; Genomic_DNA.
EMBL; BIAF01000092; GCH08557.1; -; Genomic_DNA.
EMBL; BFIH01000036; GCO24801.1; -; Genomic_DNA.
EMBL; BFKI01000100; GCR80410.1; -; Genomic_DNA.
EMBL; BFOT01000078; GCY57647.1; -; Genomic_DNA.
EMBL; BFXY01000023; GDH29133.1; -; Genomic_DNA.
EMBL; BGBC01000113; GDL45803.1; -; Genomic_DNA.
EMBL; BFZZ01000016; GDL47944.1; -; Genomic_DNA.
EMBL; BGAV01000094; GDL76575.1; -; Genomic_DNA.
EMBL; BGBP01000034; GDM74344.1; -; Genomic_DNA.
EMBL; BGBI01000048; GDO47595.1; -; Genomic_DNA.
EMBL; BGDM01000152; GDP37344.1; -; Genomic_DNA.
EMBL; BGDN01000132; GDP81692.1; -; Genomic_DNA.
EMBL; BGEG01000088; GDR52300.1; -; Genomic_DNA.
EMBL; BGGV01000143; GDR90575.1; -; Genomic_DNA.
EMBL; JUDN01000149; KHJ14403.1; -; Genomic_DNA.
EMBL; JZDZ01000109; KJW45163.1; -; Genomic_DNA.
EMBL; LGZP01000018; KNF80390.1; -; Genomic_DNA.
EMBL; LHAT01000065; KNZ97201.1; -; Genomic_DNA.
EMBL; LSNZ01000057; KXH00674.1; -; Genomic_DNA.
EMBL; LOCS01000142; KYV68606.1; -; Genomic_DNA.
EMBL; RLHY01000068; MDT69877.1; -; Genomic_DNA.
EMBL; RMML01000121; MFA55141.1; -; Genomic_DNA.
EMBL; RNLT01000033; MGD92361.1; -; Genomic_DNA.
EMBL; RNLZ01000007; MGE13169.1; -; Genomic_DNA.
EMBL; RNTP01000094; MHP18178.1; -; Genomic_DNA.
EMBL; ROBI01000028; MIA49483.1; -; Genomic_DNA.
EMBL; RNVW01000057; MIC26275.1; -; Genomic_DNA.
EMBL; RVRO01000091; MMG62431.1; -; Genomic_DNA.
EMBL; LZEH01000037; OEI66394.1; -; Genomic_DNA.
EMBL; MPGQ01000001; OKB79100.1; -; Genomic_DNA.
EMBL; MSEK01000069; OLR87354.1; -; Genomic_DNA.
EMBL; MTKH01000136; ONG27328.1; -; Genomic_DNA.
EMBL; MUBQ01000090; OUK85779.1; -; Genomic_DNA.
EMBL; LYBG01000719; OWD69214.1; -; Genomic_DNA.
EMBL; NBSF01000064; OWS83388.1; -; Genomic_DNA.
EMBL; NIIS01000001; OXK54204.1; -; Genomic_DNA.
EMBL; NQBT01000212; OYI43930.1; -; Genomic_DNA.
EMBL; NQIT01000010; OZX97297.1; -; Genomic_DNA.
EMBL; NWAO01000049; PBR50046.1; -; Genomic_DNA.
EMBL; PUJR01000029; PQP07737.1; -; Genomic_DNA.
EMBL; PUQC01000146; PQP29065.1; -; Genomic_DNA.
EMBL; PYQW01000002; PSY81747.1; -; Genomic_DNA.
EMBL; PYQV01000002; PSZ22501.1; -; Genomic_DNA.
EMBL; CP036177; QBF91063.1; -; Genomic_DNA.
EMBL; CP041522; QDM70954.1; -; Genomic_DNA.
EMBL; CP042585; QED51980.1; -; Genomic_DNA.
EMBL; QMKN01000025; RAX32904.1; -; Genomic_DNA.
EMBL; NFTV01000011; RBV92817.1; -; Genomic_DNA.
EMBL; QOGR01000004; RCZ87495.1; -; Genomic_DNA.
EMBL; QOGZ01000035; RDA34553.1; -; Genomic_DNA.
EMBL; PDAN01000080; RFQ64179.1; -; Genomic_DNA.
EMBL; QYZG01000001; RJF05114.1; -; Genomic_DNA.
EMBL; RRVG01000003; RRL50198.1; -; Genomic_DNA.
EMBL; SCGK01000032; RXA48232.1; -; Genomic_DNA.
EMBL; SCIU01000034; RXB27573.1; -; Genomic_DNA.
EMBL; SCIR01000016; RXB67488.1; -; Genomic_DNA.
EMBL; SHHG01000031; RZW26812.1; -; Genomic_DNA.
EMBL; SHHN01000002; RZW72873.1; -; Genomic_DNA.
EMBL; UARS01000009; SPW54775.1; -; Genomic_DNA.
EMBL; UASF01000009; SQD00206.1; -; Genomic_DNA.
EMBL; UCTW01000001; SQJ50208.1; -; Genomic_DNA.
EMBL; UCVA01000004; SQK82585.1; -; Genomic_DNA.
EMBL; UCVG01000001; SQL08281.1; -; Genomic_DNA.
EMBL; UCVC01000027; SQL29476.1; -; Genomic_DNA.
EMBL; UCXQ01000003; SQO10558.1; -; Genomic_DNA.
EMBL; UEJU01000013; SRY23915.1; -; Genomic_DNA.
EMBL; UFXW01000004; STC85269.1; -; Genomic_DNA.
EMBL; UFZA01000002; STE71544.1; -; Genomic_DNA.
EMBL; UFYN01000009; STE77685.1; -; Genomic_DNA.
EMBL; UFZQ01000001; STE85461.1; -; Genomic_DNA.
EMBL; UGCG01000003; STI33514.1; -; Genomic_DNA.
EMBL; UGCO01000001; STI75309.1; -; Genomic_DNA.
EMBL; UGEA01000005; STK48850.1; -; Genomic_DNA.
EMBL; UGFM01000001; STP46021.1; -; Genomic_DNA.
EMBL; UINN01000001; SVF07432.1; -; Genomic_DNA.
EMBL; UINH01000002; SVF08682.1; -; Genomic_DNA.
EMBL; UINI01000033; SVF36439.1; -; Genomic_DNA.
EMBL; SNTV01000044; TEV05223.1; -; Genomic_DNA.
EMBL; SNTW01000044; TEV31560.1; -; Genomic_DNA.
EMBL; MTWZ01000073; TEZ16852.1; -; Genomic_DNA.
EMBL; MTXT01000020; TFA19111.1; -; Genomic_DNA.
EMBL; MTYC01000035; TFA65399.1; -; Genomic_DNA.
EMBL; RZDD01000126; TFP29980.1; -; Genomic_DNA.
EMBL; RZBT01000047; TFR24959.1; -; Genomic_DNA.
EMBL; QERZ01000004; TFX47052.1; -; Genomic_DNA.
EMBL; QESO01000031; TFY28177.1; -; Genomic_DNA.
EMBL; QRFM01000032; TGD62953.1; -; Genomic_DNA.
EMBL; SRMS01000004; TGI08689.1; -; Genomic_DNA.
EMBL; SROW01000161; TGJ55810.1; -; Genomic_DNA.
EMBL; RRPF01000020; TJE76204.1; -; Genomic_DNA.
EMBL; RRKL01000040; TJK89817.1; -; Genomic_DNA.
EMBL; RRKF01000032; TJL17078.1; -; Genomic_DNA.
EMBL; RRKG01000012; TJL30977.1; -; Genomic_DNA.
EMBL; RRIG01000029; TJN70511.1; -; Genomic_DNA.
EMBL; RREH01000027; TJS94158.1; -; Genomic_DNA.
EMBL; RRDQ01000027; TJT61912.1; -; Genomic_DNA.
EMBL; RRDB01000012; TJU31619.1; -; Genomic_DNA.
EMBL; VODA01000022; TWP67668.1; -; Genomic_DNA.
EMBL; VSBS01000682; TXT00347.1; -; Genomic_DNA.
RefSeq; WP_000218214.1; NZ_VRXZ01000001.1.
EnsemblBacteria; AIZ82988; AIZ82988; HW42_14095.
EnsemblBacteria; CDU38195; CDU38195; PGD_01271.
EnsemblBacteria; CTT47607; CTT47607; ERS085379_01273.
EnsemblBacteria; CTU20430; CTU20430; ERS085386_05041.
EnsemblBacteria; KHI36969; KHI36969; PU33_03400.
EnsemblBacteria; KHJ14403; KHJ14403; PU06_24500.
EnsemblBacteria; KIG81291; KIG81291; PU38_10665.
EnsemblBacteria; KIH05836; KIH05836; PU21_11425.
EnsemblBacteria; KJW45163; KJW45163; UN91_23615.
EnsemblBacteria; KNF80390; KNF80390; WQ89_10695.
EnsemblBacteria; KNY74737; KNY74737; AGA26_15580.
EnsemblBacteria; KNZ97201; KNZ97201; AKG99_20940.
EnsemblBacteria; KUU39458; KUU39458; AWF22_11735.
EnsemblBacteria; KXH00674; KXH00674; HMPREF3040_01583.
EnsemblBacteria; KYV68606; KYV68606; AMK83_16550.
EnsemblBacteria; KZJ57871; KZJ57871; AWG90_01520.
EnsemblBacteria; OAJ88961; OAJ88961; A5958_20780.
EnsemblBacteria; OAS82335; OAS82335; A6I92_11550.
EnsemblBacteria; OCO44190; OCO44190; AN669_0219065.
EnsemblBacteria; ODH27375; ODH27375; A6803_21690.
EnsemblBacteria; OEI66394; OEI66394; A9R57_25255.
PATRIC; fig|562.10472.peg.1936; -.
eggNOG; COG0693; LUCA.
OrthoDB; 1152952at2; -.
BioCyc; GCF_001562855-HMP:HMPREF3040_RS07535-MONOMER; -.
BioCyc; GCF_001936315:BJJ90_RS16335-MONOMER; -.
Proteomes; UP000028873; Unassembled WGS sequence.
Proteomes; UP000030783; Chromosome.
Proteomes; UP000030834; Unassembled WGS sequence.
Proteomes; UP000033371; Unassembled WGS sequence.
Proteomes; UP000036728; Unassembled WGS sequence.
Proteomes; UP000036812; Unassembled WGS sequence.
Proteomes; UP000040589; Unassembled WGS sequence.
Proteomes; UP000042887; Unassembled WGS sequence.
Proteomes; UP000070450; Unassembled WGS sequence.
Proteomes; UP000076304; Unassembled WGS sequence.
Proteomes; UP000095183; Unassembled WGS sequence.
Proteomes; UP000185422; Chromosome.
Proteomes; UP000186204; Unassembled WGS sequence.
Proteomes; UP000186715; Unassembled WGS sequence.
Proteomes; UP000188724; Unassembled WGS sequence.
Proteomes; UP000195177; Unassembled WGS sequence.
Proteomes; UP000196822; Unassembled WGS sequence.
Proteomes; UP000197917; Unassembled WGS sequence.
Proteomes; UP000214591; Unassembled WGS sequence.
Proteomes; UP000215008; Unassembled WGS sequence.
Proteomes; UP000216687; Unassembled WGS sequence.
Proteomes; UP000217968; Unassembled WGS sequence.
Proteomes; UP000236587; Chromosome.
Proteomes; UP000238978; Unassembled WGS sequence.
Proteomes; UP000239819; Unassembled WGS sequence.
Proteomes; UP000240829; Unassembled WGS sequence.
Proteomes; UP000241957; Unassembled WGS sequence.
Proteomes; UP000246203; Chromosome.
Proteomes; UP000247985; Chromosome.
Proteomes; UP000249874; Chromosome.
Proteomes; UP000250208; Chromosome.
Proteomes; UP000250397; Unassembled WGS sequence.
Proteomes; UP000250541; Unassembled WGS sequence.
Proteomes; UP000250561; Unassembled WGS sequence.
Proteomes; UP000250650; Unassembled WGS sequence.
Proteomes; UP000250781; Unassembled WGS sequence.
Proteomes; UP000251031; Unassembled WGS sequence.
Proteomes; UP000251407; Unassembled WGS sequence.
Proteomes; UP000251885; Unassembled WGS sequence.
Proteomes; UP000252837; Chromosome.
Proteomes; UP000252917; Unassembled WGS sequence.
Proteomes; UP000252942; Unassembled WGS sequence.
Proteomes; UP000253687; Unassembled WGS sequence.
Proteomes; UP000254219; Unassembled WGS sequence.
Proteomes; UP000254405; Unassembled WGS sequence.
Proteomes; UP000254647; Unassembled WGS sequence.
Proteomes; UP000255078; Unassembled WGS sequence.
Proteomes; UP000255164; Unassembled WGS sequence.
Proteomes; UP000255181; Unassembled WGS sequence.
Proteomes; UP000255454; Unassembled WGS sequence.
Proteomes; UP000255460; Unassembled WGS sequence.
Proteomes; UP000257276; Unassembled WGS sequence.
Proteomes; UP000257490; Unassembled WGS sequence.
Proteomes; UP000258149; Unassembled WGS sequence.
Proteomes; UP000258756; Unassembled WGS sequence.
Proteomes; UP000267155; Chromosome.
Proteomes; UP000267732; Unassembled WGS sequence.
Proteomes; UP000270250; Unassembled WGS sequence.
Proteomes; UP000272336; Unassembled WGS sequence.
Proteomes; UP000272662; Unassembled WGS sequence.
Proteomes; UP000272738; Chromosome.
Proteomes; UP000273909; Unassembled WGS sequence.
Proteomes; UP000273938; Unassembled WGS sequence.
Proteomes; UP000278687; Unassembled WGS sequence.
Proteomes; UP000280118; Unassembled WGS sequence.
Proteomes; UP000281398; Unassembled WGS sequence.
Proteomes; UP000281900; Chromosome.
Proteomes; UP000285356; Unassembled WGS sequence.
Proteomes; UP000290456; Unassembled WGS sequence.
Proteomes; UP000290592; Unassembled WGS sequence.
Proteomes; UP000290652; Unassembled WGS sequence.
Proteomes; UP000290731; Chromosome.
Proteomes; UP000292161; Unassembled WGS sequence.
Proteomes; UP000293065; Unassembled WGS sequence.
Proteomes; UP000295432; Unassembled WGS sequence.
Proteomes; UP000297247; Unassembled WGS sequence.
Proteomes; UP000297283; Unassembled WGS sequence.
Proteomes; UP000297289; Unassembled WGS sequence.
Proteomes; UP000297379; Unassembled WGS sequence.
Proteomes; UP000297553; Unassembled WGS sequence.
Proteomes; UP000297676; Unassembled WGS sequence.
Proteomes; UP000297723; Unassembled WGS sequence.
Proteomes; UP000298006; Unassembled WGS sequence.
Proteomes; UP000298063; Unassembled WGS sequence.
Proteomes; UP000298228; Unassembled WGS sequence.
Proteomes; UP000298432; Unassembled WGS sequence.
Proteomes; UP000298440; Unassembled WGS sequence.
Proteomes; UP000299191; Unassembled WGS sequence.
Proteomes; UP000299926; Unassembled WGS sequence.
Proteomes; UP000300017; Unassembled WGS sequence.
Proteomes; UP000300234; Unassembled WGS sequence.
Proteomes; UP000300652; Unassembled WGS sequence.
Proteomes; UP000300926; Unassembled WGS sequence.
Proteomes; UP000301441; Unassembled WGS sequence.
Proteomes; UP000301935; Unassembled WGS sequence.
Proteomes; UP000302283; Unassembled WGS sequence.
Proteomes; UP000302568; Unassembled WGS sequence.
Proteomes; UP000303027; Unassembled WGS sequence.
Proteomes; UP000303301; Unassembled WGS sequence.
Proteomes; UP000303418; Unassembled WGS sequence.
Proteomes; UP000303870; Unassembled WGS sequence.
Proteomes; UP000304709; Unassembled WGS sequence.
Proteomes; UP000305613; Unassembled WGS sequence.
Proteomes; UP000305624; Unassembled WGS sequence.
Proteomes; UP000305646; Unassembled WGS sequence.
Proteomes; UP000306428; Unassembled WGS sequence.
Proteomes; UP000306475; Unassembled WGS sequence.
Proteomes; UP000308580; Unassembled WGS sequence.
Proteomes; UP000308586; Unassembled WGS sequence.
Proteomes; UP000308607; Unassembled WGS sequence.
Proteomes; UP000315727; Chromosome.
Proteomes; UP000319448; Unassembled WGS sequence.
Proteomes; UP000321461; Unassembled WGS sequence.
Proteomes; UP000321916; Chromosome.
Proteomes; UP000323341; Chromosome.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0016811; F:hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides; IEA:UniProtKB-UniRule.
GO; GO:0036524; F:protein deglycase activity; IEA:UniProtKB-UniRule.
GO; GO:0016790; F:thiolester hydrolase activity; IEA:UniProtKB-UniRule.
GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-UniRule.
GO; GO:0006281; P:DNA repair; IEA:UniProtKB-UniRule.
Gene3D; 3.40.50.880; -; 1.
HAMAP; MF_01046; Deglycase_HchA; 1.
InterPro; IPR029062; Class_I_gatase-like.
InterPro; IPR017283; HchA.
PANTHER; PTHR43824:SF8; PTHR43824:SF8; 1.
PIRSF; PIRSF037798; Chaperone_HchA; 1.
SUPFAM; SSF52317; SSF52317; 1.
2: Evidence at transcript level;
Cytoplasm {ECO:0000256|HAMAP-Rule:MF_01046};
DNA damage {ECO:0000256|HAMAP-Rule:MF_01046};
DNA repair {ECO:0000256|HAMAP-Rule:MF_01046};
Hydrolase {ECO:0000256|HAMAP-Rule:MF_01046, ECO:0000313|EMBL:QDM70954.1};
Lyase {ECO:0000313|EMBL:CTT47607.1};
Metal-binding {ECO:0000256|HAMAP-Rule:MF_01046};
Stress response {ECO:0000256|HAMAP-Rule:MF_01046,
ECO:0000313|EMBL:BBF48096.1}; Zinc {ECO:0000256|HAMAP-Rule:MF_01046}.
ACT_SITE 185
/note="Nucleophile"
/evidence="ECO:0000256|HAMAP-Rule:MF_01046"
METAL 86
/note="Zinc"
/evidence="ECO:0000256|HAMAP-Rule:MF_01046"
METAL 91
/note="Zinc"
/evidence="ECO:0000256|HAMAP-Rule:MF_01046"
METAL 123
/note="Zinc"
/evidence="ECO:0000256|HAMAP-Rule:MF_01046"
SEQUENCE 283 AA; 31176 MW; 5CA8BE99F9A83B72 CRC64;
MTVQTSKNPQ VDIAEDNAFF PSEYSLSQYT SPVSDLDGVD YPKPYRGKHK ILVIAADERY
LPTDNGKLFS TGNHPIETLL PLYHLHAAGF EFEVATISGL MTKFEYWAMP HKDEKVMPFF
EQHKSLFRNP KKLADVVASL NADSEYAAIF VPGGHGALIG LPESQDVAAA LQWAIKNDRF
VISLCHGPAA FLALRHGDNP LNGYSICAFP DAADKQTPEI GYMPGHLTWY FGEELKKMGM
NIINDDITGR VHKDRKVLTG DSPFAANALG KLAAQEMLAA YAG


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