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Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC 2.4.2.15) (Inosine phosphorylase) (Thymidine phosphorylase) (EC 2.4.2.4) (Uridine phosphorylase) (EC 2.4.2.3) (Xanthosine phosphorylase)

 A0A0A8WYK1_9DELT        Unreviewed;       105 AA.
A0A0A8WYK1;
04-MAR-2015, integrated into UniProtKB/TrEMBL.
04-MAR-2015, sequence version 1.
16-JAN-2019, entry version 18.
RecName: Full=Pyrimidine/purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01537};
EC=2.4.2.2 {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Adenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Cytidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Guanosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
EC=2.4.2.15 {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Inosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Uridine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
EC=2.4.2.3 {ECO:0000256|HAMAP-Rule:MF_01537};
AltName: Full=Xanthosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01537};
Name=ppnP {ECO:0000256|HAMAP-Rule:MF_01537};
ORFNames=OR1_03385 {ECO:0000313|EMBL:GAM11076.1};
Geobacter sp. OR-1.
Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
Geobacteraceae; Geobacter.
NCBI_TaxID=1266765 {ECO:0000313|EMBL:GAM11076.1, ECO:0000313|Proteomes:UP000030972};
[1] {ECO:0000313|EMBL:GAM11076.1, ECO:0000313|Proteomes:UP000030972}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=OR-1 {ECO:0000313|EMBL:GAM11076.1,
ECO:0000313|Proteomes:UP000030972};
PubMed=23668621; DOI=10.1021/es400231x;
Ohtsuka T., Yamaguchi N., Makino T., Sakurai K., Kimura K., Kudo K.,
Homma E., Dong DT., Amachi S.;
"Arsenic dissolution from Japanese paddy soil by a dissimilatory
arsenate-reducing bacterium Geobacter sp. OR-1.";
Environ. Sci. Technol. 47:6263-6271(2013).
[2] {ECO:0000313|EMBL:GAM11076.1, ECO:0000313|Proteomes:UP000030972}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=OR-1 {ECO:0000313|EMBL:GAM11076.1,
ECO:0000313|Proteomes:UP000030972};
Ehara A., Suzuki H., Amachi S.;
"Draft Genome Sequence of Geobacter sp. Strain OR-1, an Arsenate-
Respiring Bacterium Isolated from Japanese Paddy Soil.";
Genome Announc. 3:e01478-14(2015).
-!- FUNCTION: Catalyzes the phosphorolysis of diverse nucleosides,
yielding D-ribose 1-phosphate and the respective free bases. Can
use uridine, adenosine, guanosine, cytidine, thymidine, inosine
and xanthosine as substrates. Also catalyzes the reverse
reactions. {ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01088094}.
-!- CATALYTIC ACTIVITY:
Reaction=a purine D-ribonucleoside + phosphate = a purine
nucleobase + alpha-D-ribose 1-phosphate; Xref=Rhea:RHEA:19805,
ChEBI:CHEBI:26386, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720,
ChEBI:CHEBI:142355; EC=2.4.2.1; Evidence={ECO:0000256|HAMAP-
Rule:MF_01537};
-!- CATALYTIC ACTIVITY:
Reaction=adenosine + phosphate = adenine + alpha-D-ribose 1-
phosphate; Xref=Rhea:RHEA:27642, ChEBI:CHEBI:16335,
ChEBI:CHEBI:16708, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122736};
-!- CATALYTIC ACTIVITY:
Reaction=cytidine + phosphate = alpha-D-ribose 1-phosphate +
cytosine; Xref=Rhea:RHEA:52540, ChEBI:CHEBI:16040,
ChEBI:CHEBI:17562, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122750};
-!- CATALYTIC ACTIVITY:
Reaction=guanosine + phosphate = alpha-D-ribose 1-phosphate +
guanine; Xref=Rhea:RHEA:13233, ChEBI:CHEBI:16235,
ChEBI:CHEBI:16750, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
EC=2.4.2.15; Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122744};
-!- CATALYTIC ACTIVITY:
Reaction=inosine + phosphate = alpha-D-ribose 1-phosphate +
hypoxanthine; Xref=Rhea:RHEA:27646, ChEBI:CHEBI:17368,
ChEBI:CHEBI:17596, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122753};
-!- CATALYTIC ACTIVITY:
Reaction=phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-
phosphate + thymine; Xref=Rhea:RHEA:16037, ChEBI:CHEBI:17748,
ChEBI:CHEBI:17821, ChEBI:CHEBI:43474, ChEBI:CHEBI:57259;
EC=2.4.2.2; Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122742};
-!- CATALYTIC ACTIVITY:
Reaction=phosphate + thymidine = 2-deoxy-alpha-D-ribose 1-
phosphate + thymine; Xref=Rhea:RHEA:16037, ChEBI:CHEBI:17748,
ChEBI:CHEBI:17821, ChEBI:CHEBI:43474, ChEBI:CHEBI:57259;
EC=2.4.2.4; Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122737};
-!- CATALYTIC ACTIVITY:
Reaction=phosphate + uridine = alpha-D-ribose 1-phosphate +
uracil; Xref=Rhea:RHEA:24388, ChEBI:CHEBI:16704,
ChEBI:CHEBI:17568, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
EC=2.4.2.2; Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122739};
-!- CATALYTIC ACTIVITY:
Reaction=phosphate + uridine = alpha-D-ribose 1-phosphate +
uracil; Xref=Rhea:RHEA:24388, ChEBI:CHEBI:16704,
ChEBI:CHEBI:17568, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
EC=2.4.2.3; Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122747};
-!- CATALYTIC ACTIVITY:
Reaction=phosphate + xanthosine = alpha-D-ribose 1-phosphate +
xanthine; Xref=Rhea:RHEA:27638, ChEBI:CHEBI:17712,
ChEBI:CHEBI:18107, ChEBI:CHEBI:43474, ChEBI:CHEBI:57720;
Evidence={ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01122751};
-!- SIMILARITY: Belongs to the nucleoside phosphorylase PpnP family.
{ECO:0000256|HAMAP-Rule:MF_01537, ECO:0000256|SAAS:SAAS01088098}.
-!- CAUTION: The sequence shown here is derived from an
EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
preliminary data. {ECO:0000313|EMBL:GAM11076.1}.
-----------------------------------------------------------------------
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EMBL; BAZF01000019; GAM11076.1; -; Genomic_DNA.
RefSeq; WP_041973176.1; NZ_BAZF01000019.1.
EnsemblBacteria; GAM11076; GAM11076; OR1_03385.
OrthoDB; 1937865at2; -.
Proteomes; UP000030972; Unassembled WGS sequence.
GO; GO:0047975; F:guanosine phosphorylase activity; IEA:UniProtKB-EC.
GO; GO:0004731; F:purine-nucleoside phosphorylase activity; IEA:UniProtKB-UniRule.
GO; GO:0016154; F:pyrimidine-nucleoside phosphorylase activity; IEA:UniProtKB-UniRule.
GO; GO:0009032; F:thymidine phosphorylase activity; IEA:UniProtKB-EC.
GO; GO:0004850; F:uridine phosphorylase activity; IEA:UniProtKB-EC.
Gene3D; 2.60.120.10; -; 1.
HAMAP; MF_01537; Nucleos_phosphorylase_PpnP; 1.
InterPro; IPR009664; Ppnp.
InterPro; IPR014710; RmlC-like_jellyroll.
InterPro; IPR011051; RmlC_Cupin_sf.
PANTHER; PTHR36540; PTHR36540; 1.
Pfam; PF06865; Ppnp; 1.
SUPFAM; SSF51182; SSF51182; 1.
3: Inferred from homology;
Complete proteome {ECO:0000313|Proteomes:UP000030972};
Glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01088087};
Reference proteome {ECO:0000313|Proteomes:UP000030972};
Transferase {ECO:0000256|HAMAP-Rule:MF_01537,
ECO:0000256|SAAS:SAAS01088087}.
SEQUENCE 105 AA; 11483 MW; 94D2950CC121D7AB CRC64;
MDQFNNVSVV KKANVYFDGS VTSRTVLFSD GTKKTLGIML PGEYTFNTGV AEIMEIIAGE
LQYRVGDSGE WKRVNGGESF QVPSNSAFTM KVATVSDYCC SFLAE


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Related Genes :
[ppnP BJD20_07610 CW311_00220] Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC 2.4.2.15) (Inosine phosphorylase) (Thymidine phosphorylase) (EC 2.4.2.4) (Uridine phosphorylase) (EC 2.4.2.3) (Xanthosine phosphorylase)
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[xapA pndA b2407 JW2398] Purine nucleoside phosphorylase 2 (EC 2.4.2.1) (Inosine-guanosine phosphorylase) (Purine nucleoside phosphorylase II) (PNP II) (Xanthosine phosphorylase)
[upp-1 ZK783.2] Uridine and thymidine phosphorylase (EC 2.4.2.2) (Pyrimidine-nucleoside phosphorylase)
[ppnP OR214_03073] Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC 2.4.2.15) (Inosine phosphorylase) (Thymidine phosphorylase) (EC 2.4.2.4) (Uridine phosphorylase) (EC 2.4.2.3) (Xanthosine phosphorylase)
[ppnP OR16_09104] Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC 2.4.2.15) (Inosine phosphorylase) (Thymidine phosphorylase) (EC 2.4.2.4) (Uridine phosphorylase) (EC 2.4.2.3) (Xanthosine phosphorylase)
[ppnP SAMN04487830_10444] Pyrimidine/purine nucleoside phosphorylase (EC 2.4.2.1) (EC 2.4.2.2) (Adenosine phosphorylase) (Cytidine phosphorylase) (Guanosine phosphorylase) (EC 2.4.2.15) (Inosine phosphorylase) (Thymidine phosphorylase) (EC 2.4.2.4) (Uridine phosphorylase) (EC 2.4.2.3) (Xanthosine phosphorylase)
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[SSO2706] Purine nucleoside phosphorylase (PNP) (EC 2.4.2.1) (5'-methylthioadenosine phosphorylase I) (MTA phosphorylase I) (MTAPI) (EC 2.4.2.28)
[deoD pup b4384 JW4347] Purine nucleoside phosphorylase DeoD-type (PNP) (EC 2.4.2.1) (Inosine phosphorylase)
[PF0853] Probable 6-oxopurine nucleoside phosphorylase (EC 2.4.2.1) (Purine nucleoside phosphorylase) (PNP) (PfPNP)
[UPP2] Uridine phosphorylase 2 (UPase 2) (UrdPase 2) (EC 2.4.2.3)
[hchA A9819_11910 ACN81_03425 AML35_08765 AW059_23935 BANRA_00208 BANRA_00433 BANRA_02614 BHF46_18455 BMT91_24760 C4J69_22715 C7B08_25495 CR538_10415 D2F89_25795 D3Y67_22910 D9G42_11130 D9I97_22010 D9J11_25195 DP258_02540 EC3234A_36c00010 EC382_21100 ECTO6_01955 EFV06_13085 EFV16_12340 NCTC8500_02249 NCTC9037_02122 NCTC9117_02637 NCTC9969_02156 SAMEA3472108_01151 SAMEA3484427_04795 SAMEA3484429_02051 SAMEA3752557_05476 SAMEA3752559_04333] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
[APA1 DTP YCL050C YCL50C] Protein APA1 [Includes: Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 1 (Ap4A phosphorylase 1) (EC 2.7.7.53) (ADP-sulfurylase) (EC 2.7.7.5) (ATP adenylyltransferase) (Diadenosine tetraphosphate alpha,beta-phosphorylase (ADP-forming))]
[TYMP ECGF1] Thymidine phosphorylase (TP) (EC 2.4.2.4) (Gliostatin) (Platelet-derived endothelial cell growth factor) (PD-ECGF) (TdRPase)
[APA2 YDR530C D9719.33] Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 2 (Ap4A phosphorylase 2) (EC 2.7.7.53) (ADP-sulfurylase) (EC 2.7.7.5) (ATP adenylyltransferase)
[MTAP MSAP] S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) (5'-methylthioadenosine phosphorylase) (MTA phosphorylase) (MTAP) (MTAPase)
[UPP1 UP] Uridine phosphorylase 1 (UPase 1) (UrdPase 1) (EC 2.4.2.3)
[hprK] HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr kinase/phosphatase) (HPr(Ser) kinase/phosphorylase)
[hchA A8C65_13880 A9R57_25255 AKG99_20940 AMK83_16550 B7C53_22525 B9M99_11580 B9T59_01945 BJJ90_15205 BMT49_12710 BMT53_00170 BUE81_10670 BW690_17225 BZL69_29425 C2U48_24800 C5715_19445 C5N07_21380 C6669_19295 C7B06_02290 C7B07_03930 CDL37_00765 CG691_19145 CG705_13560 CG706_14580 CIJ94_05515 COD46_23180 CQP61_17160 CRD98_26150 CY655_12940 D5618_21870 D8K42_21280 D8Y29_11125 D9D20_21030 D9D43_06110 D9E22_21005 D9H68_20750 D9H70_25730 D9I87_15275 DL800_09215 DNQ41_14245 DQE83_22775 DTL43_21780 DTM25_06080 DU321_04440 E2855_02503 E2863_02392 EC95NR1_00961 ED648_25045 EFV01_02465 EFV04_09725 EOL36_23890 ERS085379_01273 ERS085386_05041 HMPREF3040_01583 HW43_13705 NCTC10082_04431 NCTC10418_03071 NCTC10767_03558 NCTC11022_01867 NCTC11126_04427 NCTC11181_05650 NCTC12950_02263 NCTC13462_05714 NCTC8985_00529 NCTC9111_05933 NCTC9112_02079 NCTC9703_00277 PU06_24500 SAMEA3472043_00447 SAMEA3472055_03589 SAMEA3472056_01268 SAMEA3472070_00654 SAMEA3472080_04213 SAMEA3472090_03376 SAMEA3472110_00060 SAMEA3472112_00448 SAMEA3752372_00752 UN91_23615 WQ89_10695] Protein/nucleic acid deglycase HchA (EC 3.1.2.-) (EC 3.5.1.-) (EC 3.5.1.124) (Maillard deglycase)
[Rv2613c] AP-4-A phosphorylase (EC 2.7.7.53) (ATP adenylyltransferase) (Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase) (AP,A phosphorylase)
[udp b3831 JW3808] Uridine phosphorylase (UPase) (UrdPase) (EC 2.4.2.3)
[] Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM (Precursor membrane protein); Peptide pr (Peptide precursor); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)]
[hprK ptsK yvoB BSU35000] HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr kinase/phosphatase) (HPr(Ser) kinase/phosphorylase)
[PHS1 At3g29320 MUO10.17] Alpha-glucan phosphorylase 1 (AtPHS1) (EC 2.4.1.1) (Alpha-glucan phosphorylase, L isozyme) (Starch phosphorylase L)
[VTC2 At4g26850 F10M23.190] GDP-L-galactose phosphorylase 1 (EC 2.7.7.69) (Protein VITAMIN C DEFECTIVE 2)
[hprK] HPr kinase/phosphorylase (HPrK/P) (EC 2.7.11.-) (EC 2.7.4.-) (HPr kinase/phosphatase) (HPr(Ser) kinase/phosphorylase)
[pnp comR pnpA BSU16690] Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) (Vegetative protein 15) (VEG15)
[PHKG1 PHKG] Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform (PHK-gamma-M) (EC 2.7.11.19) (Phosphorylase kinase subunit gamma-1) (Serine/threonine-protein kinase PHKG1) (EC 2.7.11.1) (EC 2.7.11.26)

Bibliography :