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RB transcriptional corepressor 1

 F6ZZR2_MONDO            Unreviewed;       932 AA.
F6ZZR2;
27-JUL-2011, integrated into UniProtKB/TrEMBL.
27-JUL-2011, sequence version 1.
16-JAN-2019, entry version 51.
SubName: Full=RB transcriptional corepressor 1 {ECO:0000313|Ensembl:ENSMODP00000013976};
Name=RB1 {ECO:0000313|Ensembl:ENSMODP00000013976};
Monodelphis domestica (Gray short-tailed opossum).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis.
NCBI_TaxID=13616 {ECO:0000313|Ensembl:ENSMODP00000013976, ECO:0000313|Proteomes:UP000002280};
[1] {ECO:0000313|Ensembl:ENSMODP00000013976, ECO:0000313|Proteomes:UP000002280}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=17495919; DOI=10.1038/nature05805;
Mikkelsen T.S., Wakefield M.J., Aken B., Amemiya C.T., Chang J.L.,
Duke S., Garber M., Gentles A.J., Goodstadt L., Heger A., Jurka J.,
Kamal M., Mauceli E., Searle S.M., Sharpe T., Baker M.L., Batzer M.A.,
Benos P.V., Belov K., Clamp M., Cook A., Cuff J., Das R., Davidow L.,
Deakin J.E., Fazzari M.J., Glass J.L., Grabherr M., Greally J.M.,
Gu W., Hore T.A., Huttley G.A., Kleber M., Jirtle R.L., Koina E.,
Lee J.T., Mahony S., Marra M.A., Miller R.D., Nicholls R.D., Oda M.,
Papenfuss A.T., Parra Z.E., Pollock D.D., Ray D.A., Schein J.E.,
Speed T.P., Thompson K., VandeBerg J.L., Wade C.M., Walker J.A.,
Waters P.D., Webber C., Weidman J.R., Xie X., Zody M.C., Baldwin J.,
Abdouelleil A., Abdulkadir J., Abebe A., Abera B., Abreu J.,
Acer S.C., Aftuck L., Alexander A., An P., Anderson E., Anderson S.,
Arachi H., Azer M., Bachantsang P., Barry A., Bayul T., Berlin A.,
Bessette D., Bloom T., Bloom T., Boguslavskiy L., Bonnet C.,
Boukhgalter B., Bourzgui I., Brown A., Cahill P., Channer S.,
Cheshatsang Y., Chuda L., Citroen M., Collymore A., Cooke P.,
Costello M., D'Aco K., Daza R., De Haan G., DeGray S., DeMaso C.,
Dhargay N., Dooley K., Dooley E., Doricent M., Dorje P., Dorjee K.,
Dupes A., Elong R., Falk J., Farina A., Faro S., Ferguson D.,
Fisher S., Foley C.D., Franke A., Friedrich D., Gadbois L., Gearin G.,
Gearin C.R., Giannoukos G., Goode T., Graham J., Grandbois E.,
Grewal S., Gyaltsen K., Hafez N., Hagos B., Hall J., Henson C.,
Hollinger A., Honan T., Huard M.D., Hughes L., Hurhula B., Husby M.E.,
Kamat A., Kanga B., Kashin S., Khazanovich D., Kisner P., Lance K.,
Lara M., Lee W., Lennon N., Letendre F., LeVine R., Lipovsky A.,
Liu X., Liu J., Liu S., Lokyitsang T., Lokyitsang Y., Lubonja R.,
Lui A., MacDonald P., Magnisalis V., Maru K., Matthews C.,
McCusker W., McDonough S., Mehta T., Meldrim J., Meneus L., Mihai O.,
Mihalev A., Mihova T., Mittelman R., Mlenga V., Montmayeur A.,
Mulrain L., Navidi A., Naylor J., Negash T., Nguyen T., Nguyen N.,
Nicol R., Norbu C., Norbu N., Novod N., O'Neill B., Osman S.,
Markiewicz E., Oyono O.L., Patti C., Phunkhang P., Pierre F.,
Priest M., Raghuraman S., Rege F., Reyes R., Rise C., Rogov P.,
Ross K., Ryan E., Settipalli S., Shea T., Sherpa N., Shi L., Shih D.,
Sparrow T., Spaulding J., Stalker J., Stange-Thomann N.,
Stavropoulos S., Stone C., Strader C., Tesfaye S., Thomson T.,
Thoulutsang Y., Thoulutsang D., Topham K., Topping I., Tsamla T.,
Vassiliev H., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J.,
Wilson A., Yadav S., Young G., Yu Q., Zembek L., Zhong D., Zimmer A.,
Zwirko Z., Jaffe D.B., Alvarez P., Brockman W., Butler J., Chin C.,
Gnerre S., MacCallum I., Graves J.A., Ponting C.P., Breen M.,
Samollow P.B., Lander E.S., Lindblad-Toh K.;
"Genome of the marsupial Monodelphis domestica reveals innovation in
non-coding sequences.";
Nature 447:167-177(2007).
[2] {ECO:0000313|Ensembl:ENSMODP00000013976}
IDENTIFICATION.
Ensembl;
Submitted (JUL-2011) to UniProtKB.
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STRING; 13616.ENSMODP00000013976; -.
Ensembl; ENSMODT00000014231; ENSMODP00000013976; ENSMODG00000011168.
eggNOG; KOG1010; Eukaryota.
eggNOG; ENOG410XQF7; LUCA.
GeneTree; ENSGT00940000155912; -.
InParanoid; F6ZZR2; -.
OMA; EMQRTPR; -.
TreeFam; TF105568; -.
Proteomes; UP000002280; Chromosome 4.
Bgee; ENSMODG00000011168; Expressed in 7 organ(s), highest expression level in heart.
GO; GO:0000785; C:chromatin; IBA:GO_Central.
GO; GO:0008024; C:cyclin/CDK positive transcription elongation factor complex; IEA:Ensembl.
GO; GO:0016605; C:PML body; IEA:Ensembl.
GO; GO:0035189; C:Rb-E2F complex; IBA:GO_Central.
GO; GO:0005819; C:spindle; IEA:Ensembl.
GO; GO:0005667; C:transcription factor complex; IBA:GO_Central.
GO; GO:0097718; F:disordered domain specific binding; IEA:Ensembl.
GO; GO:0042802; F:identical protein binding; IEA:Ensembl.
GO; GO:0061676; F:importin-alpha family protein binding; IEA:Ensembl.
GO; GO:0019900; F:kinase binding; IEA:Ensembl.
GO; GO:0051219; F:phosphoprotein binding; IEA:Ensembl.
GO; GO:0000987; F:proximal promoter sequence-specific DNA binding; IEA:Ensembl.
GO; GO:0001102; F:RNA polymerase II activating transcription factor binding; IBA:GO_Central.
GO; GO:0001012; F:RNA polymerase II regulatory region DNA binding; IBA:GO_Central.
GO; GO:0031625; F:ubiquitin protein ligase binding; IEA:Ensembl.
GO; GO:0003180; P:aortic valve morphogenesis; IEA:Ensembl.
GO; GO:0007050; P:cell cycle arrest; IEA:Ensembl.
GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
GO; GO:0051301; P:cell division; IEA:Ensembl.
GO; GO:0048667; P:cell morphogenesis involved in neuron differentiation; IBA:GO_Central.
GO; GO:0071466; P:cellular response to xenobiotic stimulus; IEA:Ensembl.
GO; GO:0048565; P:digestive tract development; IEA:Ensembl.
GO; GO:0043353; P:enucleate erythrocyte differentiation; IEA:Ensembl.
GO; GO:0034349; P:glial cell apoptotic process; IEA:Ensembl.
GO; GO:0097284; P:hepatocyte apoptotic process; IEA:Ensembl.
GO; GO:0034088; P:maintenance of mitotic sister chromatid cohesion; IEA:Ensembl.
GO; GO:0045445; P:myoblast differentiation; IEA:Ensembl.
GO; GO:0120163; P:negative regulation of cold-induced thermogenesis; IEA:Ensembl.
GO; GO:0050680; P:negative regulation of epithelial cell proliferation; IEA:Ensembl.
GO; GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; IBA:GO_Central.
GO; GO:0050728; P:negative regulation of inflammatory response; IEA:Ensembl.
GO; GO:1904761; P:negative regulation of myofibroblast differentiation; IEA:Ensembl.
GO; GO:0006469; P:negative regulation of protein kinase activity; IEA:Ensembl.
GO; GO:0045879; P:negative regulation of smoothened signaling pathway; IEA:Ensembl.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:Ensembl.
GO; GO:0071930; P:negative regulation of transcription involved in G1/S transition of mitotic cell cycle; IEA:Ensembl.
GO; GO:0051402; P:neuron apoptotic process; IEA:Ensembl.
GO; GO:0030182; P:neuron differentiation; IBA:GO_Central.
GO; GO:0042551; P:neuron maturation; IEA:Ensembl.
GO; GO:0031175; P:neuron projection development; IBA:GO_Central.
GO; GO:1904028; P:positive regulation of collagen fibril organization; IEA:Ensembl.
GO; GO:0045651; P:positive regulation of macrophage differentiation; IEA:Ensembl.
GO; GO:0045842; P:positive regulation of mitotic metaphase/anaphase transition; IEA:Ensembl.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IEA:Ensembl.
GO; GO:2000679; P:positive regulation of transcription regulatory region DNA binding; IEA:Ensembl.
GO; GO:0071459; P:protein localization to chromosome, centromeric region; IEA:Ensembl.
GO; GO:0007265; P:Ras protein signal transduction; IEA:Ensembl.
GO; GO:0001558; P:regulation of cell growth; IEA:Ensembl.
GO; GO:0071922; P:regulation of cohesin loading; IEA:Ensembl.
GO; GO:0043550; P:regulation of lipid kinase activity; IEA:Ensembl.
GO; GO:0007346; P:regulation of mitotic cell cycle; IBA:GO_Central.
GO; GO:0031134; P:sister chromatid biorientation; IEA:Ensembl.
GO; GO:0035914; P:skeletal muscle cell differentiation; IEA:Ensembl.
GO; GO:0051146; P:striated muscle cell differentiation; IEA:Ensembl.
GO; GO:0001894; P:tissue homeostasis; IEA:Ensembl.
CDD; cd00043; CYCLIN; 1.
InterPro; IPR013763; Cyclin-like.
InterPro; IPR036915; Cyclin-like_sf.
InterPro; IPR033057; RB1.
InterPro; IPR002720; RB_A.
InterPro; IPR002719; RB_B.
InterPro; IPR015030; RB_C.
InterPro; IPR028309; RB_fam.
InterPro; IPR024599; RB_N.
PANTHER; PTHR13742; PTHR13742; 1.
PANTHER; PTHR13742:SF17; PTHR13742:SF17; 1.
Pfam; PF11934; DUF3452; 1.
Pfam; PF01858; RB_A; 1.
Pfam; PF01857; RB_B; 1.
Pfam; PF08934; Rb_C; 1.
SMART; SM00385; CYCLIN; 1.
SMART; SM01367; DUF3452; 1.
SMART; SM01368; RB_A; 1.
SMART; SM01369; Rb_C; 1.
SUPFAM; SSF47954; SSF47954; 2.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000002280};
Reference proteome {ECO:0000313|Proteomes:UP000002280}.
DOMAIN 106 232 DUF3452. {ECO:0000259|SMART:SM01367}.
DOMAIN 376 576 RB_A. {ECO:0000259|SMART:SM01368}.
DOMAIN 664 749 CYCLIN. {ECO:0000259|SMART:SM00385}.
DOMAIN 772 931 Rb_C. {ECO:0000259|SMART:SM01369}.
COILED 317 337 {ECO:0000256|SAM:Coils}.
SEQUENCE 932 AA; 106679 MW; 0038C516D963BDC1 CRC64;
PAHQSVMPPK APRKPAASTP EPPPPPPSPP PREEEPEPDS GPGELQLVRL EFEETEDPDF
TTLCQKLKLP NRVRKEAWEN WEKVSSMDGV LEYDIQKKKE LWGICIFTAA IDLDEMPFTF
TELQKNIDIS VHKFYHLLRE IDTSTKVDST VSRLMKKYDV LFALYDKLER TCGLIYVAQP
SSPISSEINS MLVLKVSWIL FLLAKGEILQ MEDDLVISFQ LMLCVLDYFI KLSPPAVLNE
PYTVSTSSIN GSPRTPRRGQ NRSARIARQP ETDTRVIEVL CKEHECNIDE VKNVYLKNFL
PFLKSLGISA SNGLPEVENL SRQYEEIYLK NKDMDARLFL DHDKTLQADS IYSFEVERTP
RKNHPDEEMP LIPPQTPVRA VMNTIQQLVM ILNSASDQPS ENLNSYFNNC TVNPKESILK
RVENIGRIFK EKFAEAVGQG CAEIGSQRYK LGVRLYYRVM ESMLKSEEER LSIHNFSKLL
NDKIFHTSLL ACAVEVVMAT YGRNTYQSHD SGTDLSFPWI LNVLDLKAFD FYKVIESFIK
AEASLTREMI KHLERCEHRI MESLAWQSDS PLFDLIKQSK EREGSVDHLL EPTSTLNMPL
QHNHTAADLY LSPVRSPKKK GSTARINSTS SAEPQTTPAS QTQKAPKSTS LSLFYKKVYR
LAYLRLNTLC SRLLSDHPEL EHIIWTLFQH TLQNEYELMR DRHLDQIMMC SMYGICKVKN
IDLKFKIIVT AYKDLTHAIQ ETFKRVLIRE GQYDSIIVFY NLVFMQKLKT NILQYASNRP
PTLSPIPHIP RSPYKFSSSP LRVPGGNIYI SPLKSPYKFS EGLPTPTKMT PRSRILVSIG
ESFGTSEKFQ KINQMVCSSD RLLKRSAEGS NPPKPLKKLR FDIEGSDEAD GSKHLPGESK
FQQKLAEMTS TRTRMQKQKM NDSMDTSSKE EK


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Kits Elisa; taq POLYMERASE

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Pathways :
WP100: Glutathione metabolism
WP1016: Wnt Signaling Pathway
WP1039: Glutathione metabolism
WP104: Alanine and aspartate metabolism
WP1056: Complement and Coagulation Cascades
WP106: Alanine and aspartate metabolism
WP1126: Tryptophan metabolism
WP1135: Wnt Signaling Pathway
WP1172: Complement and Coagulation Cascades
WP1313: Insulin Signaling
WP1315: IL-5 Signaling Pathway
WP1318: Eicosanoid Synthesis
WP1321: Myometrial Relaxation and Contraction Pathways
WP1323: EGFR1 Signaling Pathway
WP1330: estrogen signalling
WP1331: Adipogenesis
WP1333: Hypothetical Network for Drug Addiction
WP1337: MAPK signaling pathway
WP1338: Peptide GPCRs
WP1339: Electron Transport Chain
WP1345: T Cell Receptor Signaling Pathway
WP1347: Triacylglyceride Synthesis
WP1349: Wnt Signaling Pathway
WP1350: Type II interferon signaling (IFNG)
WP1351: Apoptosis

Related Genes :
[Skor2 Corl2] SKI family transcriptional corepressor 2 (Fussel-18 homolog) (LBX1 corepressor 1-like protein) (Ladybird homeobox corepressor 1-like protein) (Transcriptional corepressor Corl2)
[Skor1 Corl1 Lbxcor1] SKI family transcriptional corepressor 1 (Fussel-15 homolog) (Ladybird homeobox corepressor 1) (Lbx1 corepressor 1) (Transcriptional corepressor Corl1)
[RB1 CK820_G0031644] RB transcriptional corepressor 1 (RB1 isoform 1) (Retinoblastoma 1)
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[SKOR1 CORL1 FUSSEL15 LBXCOR1] SKI family transcriptional corepressor 1 (Functional Smad-suppressing element on chromosome 15) (Fussel-15) (LBX1 corepressor 1) (Ladybird homeobox corepressor 1)
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1 (Retinoblastoma-associated protein)
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1
[RB1] RB transcriptional corepressor 1

Bibliography :
[29981927] Diverse EGFR Exon 20 Insertions and Co-Occurring Molecular Alterations Identified by Comprehensive Genomic Profiling of NSCLC.
[29552179] Prognostic significance of copy number alterations detected by multi-link probe amplification of multiple genes in adult acute lymphoblastic leukemia.
[29434855] Promoter methylation of , , , and and their impact on the clinical course of pilocytic astrocytomas.
[29434842] Comprehensive characterization of cancer genes in hepatocellular carcinoma genomes.
[29399358] Predictive biomarkers for combined chemotherapy with 5-fluorouracil and cisplatin in oro- and hypopharyngeal cancers.
[29105562] Reduced Retinoblastoma Protein Expression Is Associated with Decreased Patient Survival in Medullary Thyroid Cancer.
[28990063] Bioinformatics analysis of gene expression data for the identification of critical genes in breast invasive carcinoma.
[28927044] Isolation and characterization of adult mammary stem cells from breast cancer-adjacent tissues.
[28771191] Somatic Host Cell Alterations in HPV Carcinogenesis.
[25482055] Chromatin regulation: how complex does it get?
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