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Serine/threonine-protein kinase ATG1 (EC 2.7.11.1) (Autophagy-related protein 1)

 ATG1_KLULA              Reviewed;         831 AA.
Q6CSX2;
26-APR-2005, integrated into UniProtKB/Swiss-Prot.
16-AUG-2004, sequence version 1.
16-JAN-2019, entry version 90.
RecName: Full=Serine/threonine-protein kinase ATG1 {ECO:0000250|UniProtKB:P53104};
EC=2.7.11.1 {ECO:0000250|UniProtKB:P53104};
AltName: Full=Autophagy-related protein 1 {ECO:0000250|UniProtKB:P53104};
Name=ATG1 {ECO:0000250|UniProtKB:P53104};
OrderedLocusNames=KLLA0C17160g {ECO:0000303|PubMed:15229592};
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica).
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Kluyveromyces.
NCBI_TaxID=284590;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37;
PubMed=15229592; DOI=10.1038/nature02579;
Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S.,
Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E.,
Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V.,
Barnay S., Blanchin S., Beckerich J.-M., Beyne E., Bleykasten C.,
Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A.,
Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A.,
Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R.,
Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H.,
Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O.,
Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A.,
Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B.,
Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A.,
Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J.,
Wincker P., Souciet J.-L.;
"Genome evolution in yeasts.";
Nature 430:35-44(2004).
-!- FUNCTION: Serine/threonine protein kinase involved in the
cytoplasm to vacuole transport (Cvt) and found to be essential in
autophagy, where it is required for the formation of
autophagosomes. Involved in the clearance of protein aggregates
which cannot be efficiently cleared by the proteasome. Required
for selective autophagic degradation of the nucleus (nucleophagy)
as well as for mitophagy which contributes to regulate
mitochondrial quantity and quality by eliminating the mitochondria
to a basal level to fulfill cellular energy requirements and
preventing excess ROS production. Also involved in endoplasmic
reticulum-specific autophagic process, in selective removal of ER-
associated degradation (ERAD) substrates. Plays a key role in ATG9
and ATG23 cycling through the pre-autophagosomal structure and is
necessary to promote ATG18 binding to ATG9 through phosphorylation
of ATG9. {ECO:0000250|UniProtKB:P53104}.
-!- CATALYTIC ACTIVITY:
Reaction=ATP + L-seryl-[protein] = ADP + H(+) + O-phospho-L-seryl-
[protein]; Xref=Rhea:RHEA:17989, Rhea:RHEA-COMP:9863, Rhea:RHEA-
COMP:11604, ChEBI:CHEBI:15378, ChEBI:CHEBI:29999,
ChEBI:CHEBI:30616, ChEBI:CHEBI:83421, ChEBI:CHEBI:456216;
EC=2.7.11.1; Evidence={ECO:0000250|UniProtKB:P53104};
-!- CATALYTIC ACTIVITY:
Reaction=ATP + L-threonyl-[protein] = ADP + H(+) + O-phospho-L-
threonyl-[protein]; Xref=Rhea:RHEA:46608, Rhea:RHEA-COMP:11060,
Rhea:RHEA-COMP:11605, ChEBI:CHEBI:15378, ChEBI:CHEBI:30013,
ChEBI:CHEBI:30616, ChEBI:CHEBI:61977, ChEBI:CHEBI:456216;
EC=2.7.11.1; Evidence={ECO:0000250|UniProtKB:P53104};
-!- SUBUNIT: Homodimer. Forms a ternary complex with ATG13 and ATG17.
{ECO:0000250|UniProtKB:P53104}.
-!- INTERACTION:
Q6CWK2:ATG13; NbExp=4; IntAct=EBI-16151357, EBI-16151385;
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:P53104}.
Preautophagosomal structure membrane
{ECO:0000250|UniProtKB:P53104}; Peripheral membrane protein
{ECO:0000250|UniProtKB:P53104}.
-!- SIMILARITY: Belongs to the protein kinase superfamily. Ser/Thr
protein kinase family. APG1/unc-51/ULK1 subfamily.
{ECO:0000255|PROSITE-ProRule:PRU00159}.
-----------------------------------------------------------------------
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EMBL; CR382123; CAH01818.1; -; Genomic_DNA.
RefSeq; XP_452967.1; XM_452967.1.
ProteinModelPortal; Q6CSX2; -.
SMR; Q6CSX2; -.
DIP; DIP-61491N; -.
IntAct; Q6CSX2; 1.
STRING; 284590.XP_452967.1; -.
PRIDE; Q6CSX2; -.
EnsemblFungi; CAH01818; CAH01818; KLLA0_C17160g.
GeneID; 2892164; -.
KEGG; kla:KLLA0_C17160g; -.
eggNOG; KOG0595; Eukaryota.
eggNOG; ENOG410XR01; LUCA.
HOGENOM; HOG000246715; -.
InParanoid; Q6CSX2; -.
KO; K08269; -.
OMA; CEIAYVT; -.
Proteomes; UP000000598; Chromosome C.
GO; GO:1990316; C:Atg1/ULK1 kinase complex; IEA:EnsemblFungi.
GO; GO:0005829; C:cytosol; IEA:EnsemblFungi.
GO; GO:0097635; C:extrinsic component of autophagosome membrane; IEA:EnsemblFungi.
GO; GO:0061908; C:phagophore; IEA:EnsemblFungi.
GO; GO:0034045; C:phagophore assembly site membrane; IEA:UniProtKB-SubCell.
GO; GO:0120095; C:vacuole-isolation membrane contact site; IEA:EnsemblFungi.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO; GO:0000045; P:autophagosome assembly; IEA:EnsemblFungi.
GO; GO:0000422; P:autophagy of mitochondrion; IEA:EnsemblFungi.
GO; GO:0044805; P:late nucleophagy; IEA:EnsemblFungi.
GO; GO:0034727; P:piecemeal microautophagy of the nucleus; IEA:EnsemblFungi.
GO; GO:0046777; P:protein autophosphorylation; IEA:EnsemblFungi.
GO; GO:0032258; P:protein localization by the Cvt pathway; IEA:EnsemblFungi.
GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
GO; GO:0061709; P:reticulophagy; IEA:EnsemblFungi.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR022708; Ser/Thr_kinase_C.
Pfam; PF12063; DUF3543; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF56112; SSF56112; 1.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
1: Evidence at protein level;
ATP-binding; Autophagy; Complete proteome; Cytoplasm; Kinase;
Membrane; Nucleotide-binding; Protein transport; Reference proteome;
Serine/threonine-protein kinase; Transferase; Transport.
CHAIN 1 831 Serine/threonine-protein kinase ATG1.
/FTId=PRO_0000085647.
DOMAIN 21 321 Protein kinase. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
NP_BIND 27 35 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
ACT_SITE 168 168 Proton acceptor. {ECO:0000255|PROSITE-
ProRule:PRU00159, ECO:0000255|PROSITE-
ProRule:PRU10027}.
BINDING 50 50 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00159}.
SEQUENCE 831 AA; 94026 MW; E9C29F1492D9A489 CRC64;
MSSESHDKVV AKAIRLPTEN YSVEKEIGKG SFAVVYKGLS LRDGRNIAIK AVSRSKLKNK
KLLENLEVEI AILKKIKHPH IVGLIDCERT SSDFYLIMEY CALGDLTFFI KKRKNLVLKH
PLIKTVFEHY PPPSTEHNGL NRVLVVNYLQ QLSSALKFLR SKNLVHRDIK PQNLLLCTPL
LDYNDPKTFH ELGFVGIYNL PILKIADFGF ARFLPNTSLA ETLCGSPLYM APEILNYQKY
NAKADLWSVG TVLYEMCCGR PPFKASNHLE LFQKIKKAND EITVPSNCYI EPKLFNLIRG
LLTFDPDSRM GFTDFFNNEV VTEDLTRYEQ SYEPDLESKS KDVAESNMFV SEYLVKPLKQ
QESAHIPPTQ TDENTSVQTG VRRTSGKERL ATNHPPHQQI HPEDNSQNPE QSYQSASQKR
LKSSYNDLIL EKEYVVVEKK TVEVNSLADD FANNGPITNN QGAQVIKPLR YRTSSSSDAS
GGRRASLVER RLSISSLSPS NALSKALGLA SVRLFGYQHN TKATSSPPQQ TLLNPQIFQE
LTENAVLRAD HKLNPFSEQM LDSNITPAVE SLAAKAFVMY SFAEMKFSQI LPTPPSSTDY
DPLSDKRLSN GSCAIEDEED LDQGRPPSNQ TLTSATTKIS SATNVDTQIP APELKKLCTE
SLLLYLKALT ILAASMKLTS KWWYENESKN CTLKLNILVQ WIRDRFNECL DKAEFLRLKL
HAINTSPNSQ WSDDDPVIFV EKLIYDRALD ISRNAARMEM ESGNYNTCEL AYATSLWMLE
ILLDENFQFN EVYDDEYASN ITSLDESDKE MIKKYISSIA NRLKALKSKM V


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Pathways :
WP1659: Glycine, serine and threonine metabolism
WP2199: Seed Development
WP1493: Carbon assimilation C4 pathway
WP2272: Pathogenic Escherichia coli infection
WP731: Sterol regulatory element binding protein related
WP1049: G Protein Signaling Pathways
WP1165: G Protein Signaling Pathways
WP1371: G Protein Signaling Pathways
WP1438: Influenza A virus infection
WP1502: Mitochondrial biogenesis
WP1531: Vitamin D synthesis
WP1566: Citrate cycle (TCA cycle)
WP1613: 1,4-Dichlorobenzene degradation
WP1616: ABC transporters
WP1624: Bacterial secretion system
WP1625: Base excision repair
WP1644: DNA replication
WP1650: Fluorobenzoate degradation
WP1654: gamma-Hexachlorocyclohexane degradation
WP1657: Glycerolipid metabolism
WP1661: Glyoxylate and dicarboxylate metabolism
WP1663: Homologous recombination
WP1665: Limonene and pinene degradation
WP1672: Mismatch repair
WP1673: Naphthalene and anthracene degradation

Related Genes :
[ULK1 KIAA0722] Serine/threonine-protein kinase ULK1 (EC 2.7.11.1) (Autophagy-related protein 1 homolog) (ATG1) (hATG1) (Unc-51-like kinase 1)
[ATG1A At3g61960 F21F14.130] Serine/threonine-protein kinase ATG1a (EC 2.7.11.-) (Autophagy-related protein 1a) (AtAPG1a)
[apg-1 atg1 NCU00188] Serine/threonine-protein kinase apg-1 (EC 2.7.11.1) (Autophagy-related protein 1)
[ATG1C At2g37840] Serine/threonine-protein kinase ATG1c (EC 2.7.11.-) (Autophagy-related protein 1c) (AtAPG1c)
[ATG1B At3g53930 F5K20_230] Serine/threonine-protein kinase ATG1b (EC 2.7.11.-) (Autophagy-related protein 1b) (AtAPG1b)
[PRKAA1 AMPK1] 5'-AMP-activated protein kinase catalytic subunit alpha-1 (AMPK subunit alpha-1) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31) (Tau-protein kinase PRKAA1) (EC 2.7.11.26)
[Prkaa1 Ampk1] 5'-AMP-activated protein kinase catalytic subunit alpha-1 (AMPK subunit alpha-1) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31) (Tau-protein kinase PRKAA1) (EC 2.7.11.26)
[Prkaa1] 5'-AMP-activated protein kinase catalytic subunit alpha-1 (AMPK subunit alpha-1) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31) (Tau-protein kinase PRKAA1) (EC 2.7.11.26)
[Ulk1] Serine/threonine-protein kinase ULK1 (EC 2.7.11.1) (Serine/threonine-protein kinase Unc51.1) (Unc-51-like kinase 1)
[PRKAA1 AMPK1] 5'-AMP-activated protein kinase catalytic subunit alpha-1 (AMPK subunit alpha-1) (EC 2.7.11.1) (AMPK 63 kDa subunit) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31) (Tau-protein kinase PRKAA1) (EC 2.7.11.26) (Fragments)
[PRKAA1] 5'-AMP-activated protein kinase catalytic subunit alpha-1 (AMPK subunit alpha-1) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31) (Tau-protein kinase PRKAA1) (EC 2.7.11.26) (Fragment)
[Prkaa2 Ampk Ampk2] 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)
[PRKAA2 AMPK AMPK2] 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)
[Prkaa2] 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)
[KIN10 AK21 AKIN10 SKIN10 SNR2 SNRK1.1 At3g01090 T4P13.22] SNF1-related protein kinase catalytic subunit alpha KIN10 (AKIN10) (EC 2.7.11.1) (AKIN alpha-2) (AKINalpha2) (SNF1-related kinase 1.1) (SnRK1.1)
[PRKAA2 AMPK2] 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)
[PRKAA2] 5'-AMP-activated protein kinase catalytic subunit alpha-2 (AMPK subunit alpha-2) (EC 2.7.11.1) (Acetyl-CoA carboxylase kinase) (ACACA kinase) (EC 2.7.11.27) (Hydroxymethylglutaryl-CoA reductase kinase) (HMGCR kinase) (EC 2.7.11.31)
[Tor CG5092] Serine/threonine-protein kinase Tor (EC 2.7.11.1) (Target of rapamycin)
[At1g49180 F27J15.5] Serine/threonine-protein kinase ATG1t (EC 2.7.11.-) (Autophagy-related protein 1t)
[Aurka Aik Airk Ark1 Aura Ayk1 Btak Iak1 Stk15 Stk6] Aurora kinase A (EC 2.7.11.1) (Aurora 2) (Aurora family kinase 1) (Aurora/IPL1-related kinase 1) (ARK-1) (Aurora-related kinase 1) (Ipl1- and aurora-related kinase 1) (Serine/threonine-protein kinase 6) (Serine/threonine-protein kinase Ayk1) (Serine/threonine-protein kinase aurora-A)
[AURKA AIK AIRK1 ARK1 AURA AYK1 BTAK IAK1 STK15 STK6] Aurora kinase A (EC 2.7.11.1) (Aurora 2) (Aurora/IPL1-related kinase 1) (ARK-1) (Aurora-related kinase 1) (hARK1) (Breast tumor-amplified kinase) (Serine/threonine-protein kinase 15) (Serine/threonine-protein kinase 6) (Serine/threonine-protein kinase aurora-A)
[AURKB AIK2 AIM1 AIRK2 ARK2 STK1 STK12 STK5] Aurora kinase B (EC 2.7.11.1) (Aurora 1) (Aurora- and IPL1-like midbody-associated protein 1) (AIM-1) (Aurora/IPL1-related kinase 2) (ARK-2) (Aurora-related kinase 2) (STK-1) (Serine/threonine-protein kinase 12) (Serine/threonine-protein kinase 5) (Serine/threonine-protein kinase aurora-B)
[SRK2E OST1 SNRK2.6 At4g33950 F17I5.140] Serine/threonine-protein kinase SRK2E (EC 2.7.11.1) (Protein OPEN STOMATA 1) (SNF1-related kinase 2.6) (SnRK2.6) (Serine/threonine-protein kinase OST1)
[stk-1 bur1 B20D17.070 NCU01435] Serine/threonine-protein kinase bur1 (EC 2.7.11.22) (EC 2.7.11.23) (Serine-threonine kinase 1)
[Aurkb Aik2 Aim1 Airk2 Ark2 Stk1 Stk12 Stk5] Aurora kinase B (EC 2.7.11.1) (Aurora 1) (Aurora- and IPL1-like midbody-associated protein 1) (Aurora/IPL1-related kinase 2) (ARK-2) (Aurora-related kinase 2) (STK-1) (Serine/threonine-protein kinase 12) (Serine/threonine-protein kinase 5) (Serine/threonine-protein kinase aurora-B)
[ATG9 APG9 AUT9 CVT7 YDL149W D1560] Autophagy-related protein 9 (Cytoplasm to vacuole targeting protein 7)
[PKN1 PAK1 PKN PRK1 PRKCL1] Serine/threonine-protein kinase N1 (EC 2.7.11.13) (Protease-activated kinase 1) (PAK-1) (Protein kinase C-like 1) (Protein kinase C-like PKN) (Protein kinase PKN-alpha) (Protein-kinase C-related kinase 1) (Serine-threonine protein kinase N)
[CIPK7 PKS7 SnRK3.10 SR2 SRPK1 At3g23000 MXC7.3] CBL-interacting serine/threonine-protein kinase 7 (EC 2.7.11.1) (SNF1-related kinase 3.10) (SOS2-like protein kinase PKS7) (Serine/threonine-protein kinase SR2) (AtSR2) (AtSRPK1)
[aurka-a aurka eg2 stk6] Aurora kinase A-A (EC 2.7.11.1) (Aurora/IPL1-related kinase 1) (ARK-1) (Aurora-related kinase 1) (Serine/threonine-protein kinase 6-A) (Serine/threonine-protein kinase Eg2-A) (pEg2) (Serine/threonine-protein kinase aurora-A) (p46Eg265)
[AURKC AIE2 AIK3 AIRK3 ARK3 STK13] Aurora kinase C (EC 2.7.11.1) (Aurora 3) (Aurora/IPL1-related kinase 3) (ARK-3) (Aurora-related kinase 3) (Aurora/IPL1/Eg2 protein 2) (Serine/threonine-protein kinase 13) (Serine/threonine-protein kinase aurora-C)

Bibliography :
[29503179] Inflammation-Modulated Metabolic Reprogramming Is Required for DUOX-Dependent Gut Immunity in Drosophila.
[28686223] Regulation of Autophagy through TORC1 and mTORC1.
[28399401] Formation of a Snf1-Mec1-Atg1 Module on Mitochondria Governs Energy Deprivation-Induced Autophagy by Regulating Mitochondrial Respiration.
[28351329] Crocetin shifts autophagic cell survival to death of breast cancer cells in chemotherapy.
[28301741] Mechanisms of Autophagy Initiation.
[28292700] Canonical and noncanonical functions of ULK/Atg1.
[28253968] Study of ULK1 Catalytic Activity and Its Regulation.
[28165887] A small-molecule activator induces ULK1-modulating autophagy-associated cell death in triple negative breast cancer.
[27932574] ULK1 cycling: The ups and downs of the autophagy response.
[27902874] Spodoptera litura autophagy-related protein 1 interacts with autophagy-related protein 5 and enhances its degradation.
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