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Tumor necrosis factor receptor superfamily member 12A (Fibroblast growth factor-inducible immediate-early response protein 14) (FGF-inducible 14) (Tweak-receptor) (TweakR) (CD antigen CD266)

 TNR12_HUMAN             Reviewed;         129 AA.
Q9NP84; D3DUA6; Q9HCS0;
27-MAY-2002, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
13-FEB-2019, entry version 147.
RecName: Full=Tumor necrosis factor receptor superfamily member 12A;
AltName: Full=Fibroblast growth factor-inducible immediate-early response protein 14;
Short=FGF-inducible 14;
AltName: Full=Tweak-receptor;
Short=TweakR;
AltName: CD_antigen=CD266;
Flags: Precursor;
Name=TNFRSF12A; Synonyms=FN14;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
TISSUE=Placenta;
PubMed=10751351; DOI=10.1016/S0002-9440(10)64996-6;
Feng S.-L.Y., Guo Y., Factor V.M., Thorgeirsson S.S., Bell D.W.,
Testa J.R., Peifley K.A., Winkles J.A.;
"The Fn14 immediate-early response gene is induced during liver
regeneration and highly expressed in both human and murine
hepatocellular carcinomas.";
Am. J. Pathol. 156:1253-1261(2000).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS 1 AND 2).
Tanaka S., Sugimachi K.;
"Human homologue of Fn14.";
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Uterus;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
FUNCTION.
PubMed=11728344; DOI=10.1016/S1074-7613(01)00232-1;
Wiley S.R., Cassiano L., Lofton T., Davis-Smith T., Winkles J.A.,
Lindner V., Liu H., Daniel T.O., Smith C.A., Fanslow W.C.;
"A novel TNF receptor family member binds TWEAK and is implicated in
angiogenesis.";
Immunity 15:837-846(2001).
[6]
STRUCTURE BY NMR OF 26-70.
RIKEN structural genomics initiative (RSGI);
"Solution structure of the STN_TNFRSF12A_TNFR domain of tumor necrosis
factor receptor superfamily member 12A precursor.";
Submitted (APR-2008) to the PDB data bank.
[7]
STRUCTURE BY NMR OF 26-70, AND DISULFIDE BONDS.
PubMed=19241374; DOI=10.1002/pro.49;
He F., Dang W., Saito K., Watanabe S., Kobayashi N., Guntert P.,
Kigawa T., Tanaka A., Muto Y., Yokoyama S.;
"Solution structure of the cysteine-rich domain in Fn14, a member of
the tumor necrosis factor receptor superfamily.";
Protein Sci. 18:650-656(2009).
-!- FUNCTION: Receptor for TNFSF12/TWEAK. Weak inducer of apoptosis in
some cell types. Promotes angiogenesis and the proliferation of
endothelial cells. May modulate cellular adhesion to matrix
proteins. {ECO:0000269|PubMed:11728344}.
-!- SUBUNIT: Associates with TRAF1 and TRAF2, and probably also with
TRAF3.
-!- INTERACTION:
Q13490:BIRC2; NbExp=2; IntAct=EBI-2851995, EBI-514538;
Q9BRI3:SLC30A2; NbExp=5; IntAct=EBI-2851995, EBI-8644112;
O43508:TNFSF12; NbExp=2; IntAct=EBI-2851995, EBI-6932080;
Q12933:TRAF2; NbExp=3; IntAct=EBI-2851995, EBI-355744;
-!- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane
protein.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1;
IsoId=Q9NP84-1; Sequence=Displayed;
Name=2;
IsoId=Q9NP84-2; Sequence=VSP_006519;
-!- TISSUE SPECIFICITY: Highly expressed in heart, placenta and
kidney. Intermediate expression in lung, skeletal muscle and
pancreas.
-!- INDUCTION: By FGF1 and phorbol ester.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution (CC BY 4.0) License
-----------------------------------------------------------------------
EMBL; AF191148; AAF69108.1; -; mRNA.
EMBL; AB035480; BAA94792.1; -; mRNA.
EMBL; AB035481; BAB17850.1; -; mRNA.
EMBL; CH471112; EAW85429.1; -; Genomic_DNA.
EMBL; CH471112; EAW85430.1; -; Genomic_DNA.
EMBL; BC002718; AAH02718.1; -; mRNA.
CCDS; CCDS10489.1; -. [Q9NP84-1]
RefSeq; NP_057723.1; NM_016639.2. [Q9NP84-1]
UniGene; Hs.355899; -.
PDB; 2EQP; NMR; -; A=28-70.
PDB; 2KMZ; NMR; -; A=28-80.
PDB; 2RPJ; NMR; -; A=28-70.
PDBsum; 2EQP; -.
PDBsum; 2KMZ; -.
PDBsum; 2RPJ; -.
ProteinModelPortal; Q9NP84; -.
SMR; Q9NP84; -.
BioGrid; 119478; 4.
IntAct; Q9NP84; 6.
MINT; Q9NP84; -.
STRING; 9606.ENSP00000326737; -.
ChEMBL; CHEMBL3712850; -.
PhosphoSitePlus; Q9NP84; -.
SwissPalm; Q9NP84; -.
BioMuta; TNFRSF12A; -.
DMDM; 21263626; -.
EPD; Q9NP84; -.
jPOST; Q9NP84; -.
MaxQB; Q9NP84; -.
PaxDb; Q9NP84; -.
PeptideAtlas; Q9NP84; -.
PRIDE; Q9NP84; -.
ProteomicsDB; 81927; -.
ProteomicsDB; 81928; -. [Q9NP84-2]
DNASU; 51330; -.
Ensembl; ENST00000326577; ENSP00000326737; ENSG00000006327. [Q9NP84-1]
Ensembl; ENST00000341627; ENSP00000343894; ENSG00000006327. [Q9NP84-2]
GeneID; 51330; -.
KEGG; hsa:51330; -.
UCSC; uc002csv.5; human. [Q9NP84-1]
CTD; 51330; -.
DisGeNET; 51330; -.
EuPathDB; HostDB:ENSG00000006327.13; -.
GeneCards; TNFRSF12A; -.
HGNC; HGNC:18152; TNFRSF12A.
HPA; HPA007853; -.
MIM; 605914; gene.
neXtProt; NX_Q9NP84; -.
OpenTargets; ENSG00000006327; -.
PharmGKB; PA134976874; -.
eggNOG; ENOG410IYHX; Eukaryota.
eggNOG; ENOG41116AK; LUCA.
GeneTree; ENSGT00390000001948; -.
HOGENOM; HOG000154660; -.
HOVERGEN; HBG031553; -.
InParanoid; Q9NP84; -.
KO; K05149; -.
OMA; MDCASCP; -.
OrthoDB; 1502512at2759; -.
PhylomeDB; Q9NP84; -.
TreeFam; TF337901; -.
Reactome; R-HSA-5668541; TNFR2 non-canonical NF-kB pathway.
Reactome; R-HSA-5676594; TNF receptor superfamily (TNFSF) members mediating non-canonical NF-kB pathway.
SIGNOR; Q9NP84; -.
ChiTaRS; TNFRSF12A; human.
EvolutionaryTrace; Q9NP84; -.
GeneWiki; TNFRSF12A; -.
GenomeRNAi; 51330; -.
PRO; PR:Q9NP84; -.
Proteomes; UP000005640; Chromosome 16.
Bgee; ENSG00000006327; Expressed in 200 organ(s), highest expression level in cortex of kidney.
ExpressionAtlas; Q9NP84; baseline and differential.
Genevisible; Q9NP84; HS.
GO; GO:0009986; C:cell surface; IEA:Ensembl.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; TAS:Reactome.
GO; GO:0001726; C:ruffle; IEA:Ensembl.
GO; GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.
GO; GO:0097191; P:extrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.
GO; GO:0045773; P:positive regulation of axon extension; IEA:Ensembl.
GO; GO:2001238; P:positive regulation of extrinsic apoptotic signaling pathway; IMP:UniProtKB.
GO; GO:0045765; P:regulation of angiogenesis; IEA:Ensembl.
GO; GO:0061041; P:regulation of wound healing; IDA:UniProtKB.
GO; GO:0006931; P:substrate-dependent cell migration, cell attachment to substrate; IEA:Ensembl.
GO; GO:0033209; P:tumor necrosis factor-mediated signaling pathway; TAS:Reactome.
CDD; cd13413; TNFRSF12A; 1.
InterPro; IPR022316; TNFR_12.
PANTHER; PTHR32037; PTHR32037; 1.
Pfam; PF12191; stn_TNFRSF12A; 1.
PRINTS; PR01962; TNFACTORR12.
ProDom; PD336131; TNFR_12; 1.
1: Evidence at protein level;
3D-structure; Alternative splicing; Angiogenesis; Apoptosis;
Cell adhesion; Complete proteome; Developmental protein;
Differentiation; Disulfide bond; Membrane; Receptor;
Reference proteome; Signal; Transmembrane; Transmembrane helix.
SIGNAL 1 27 {ECO:0000255}.
CHAIN 28 129 Tumor necrosis factor receptor
superfamily member 12A.
/FTId=PRO_0000034611.
TOPO_DOM 28 80 Extracellular. {ECO:0000255}.
TRANSMEM 81 101 Helical. {ECO:0000255}.
TOPO_DOM 102 129 Cytoplasmic. {ECO:0000255}.
REPEAT 36 67 TNFR-Cys; atypical.
DISULFID 36 49 {ECO:0000269|PubMed:19241374}.
DISULFID 52 67 {ECO:0000269|PubMed:19241374}.
DISULFID 55 64 {ECO:0000269|PubMed:19241374}.
VAR_SEQ 33 67 Missing (in isoform 2).
{ECO:0000303|Ref.2}.
/FTId=VSP_006519.
HELIX 30 33 {ECO:0000244|PDB:2EQP}.
STRAND 41 43 {ECO:0000244|PDB:2EQP}.
TURN 44 47 {ECO:0000244|PDB:2EQP}.
STRAND 48 50 {ECO:0000244|PDB:2EQP}.
HELIX 52 57 {ECO:0000244|PDB:2EQP}.
HELIX 62 65 {ECO:0000244|PDB:2EQP}.
SEQUENCE 129 AA; 13911 MW; BF3FDFB9C1E1C448 CRC64;
MARGSLRRLL RLLVLGLWLA LLRSVAGEQA PGTAPCSRGS SWSADLDKCM DCASCRARPH
SDFCLGCAAA PPAPFRLLWP ILGGALSLTF VLGLLSGFLV WRRCRRREKF TTPIEETGGE
GCPAVALIQ


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Related Genes :
[ZC3H12A MCPIP MCPIP1] Endoribonuclease ZC3H12A (EC 3.1.-.-) (Monocyte chemotactic protein-induced protein 1) (MCP-induced protein 1) (MCPIP-1) (Regnase-1) (Reg1) (Zinc finger CCCH domain-containing protein 12A)
[Zc3h12a Mcpip Mcpip1] Endoribonuclease ZC3H12A (EC 3.1.-.-) (Monocyte chemotactic protein-induced protein 1) (MCP-induced protein 1) (MCPIP-1) (Regnase-1) (Reg1) (Zinc finger CCCH domain-containing protein 12A)
[Faslg Apt1Lg1 Cd95l Fasl Tnfsf6] Tumor necrosis factor ligand superfamily member 6 (CD95 ligand) (CD95-L) (Fas antigen ligand) (Fas ligand) (FasL) (CD antigen CD178) [Cleaved into: Tumor necrosis factor ligand superfamily member 6, membrane form; Tumor necrosis factor ligand superfamily member 6, soluble form (Receptor-binding FasL ectodomain) (Soluble Fas ligand) (sFasL); ADAM10-processed FasL form (APL); FasL intracellular domain (FasL ICD) (SPPL2A-processed FasL form) (SPA)]
[TNFRSF14 HVEA HVEM UNQ329/PRO509] Tumor necrosis factor receptor superfamily member 14 (Herpes virus entry mediator A) (Herpesvirus entry mediator A) (HveA) (Tumor necrosis factor receptor-like 2) (TR2) (CD antigen CD270)
[TNFSF14 HVEML LIGHT UNQ391/PRO726] Tumor necrosis factor ligand superfamily member 14 (Herpes virus entry mediator ligand) (HVEM-L) (Herpesvirus entry mediator ligand) (CD antigen CD258) [Cleaved into: Tumor necrosis factor ligand superfamily member 14, membrane form; Tumor necrosis factor ligand superfamily member 14, soluble form]
[TNFSF11 OPGL RANKL TRANCE] Tumor necrosis factor ligand superfamily member 11 (Osteoclast differentiation factor) (ODF) (Osteoprotegerin ligand) (OPGL) (Receptor activator of nuclear factor kappa-B ligand) (RANKL) (TNF-related activation-induced cytokine) (TRANCE) (CD antigen CD254) [Cleaved into: Tumor necrosis factor ligand superfamily member 11, membrane form; Tumor necrosis factor ligand superfamily member 11, soluble form]
[IFI27] Interferon alpha-inducible protein 27, mitochondrial (p27) (Interferon alpha-induced 11.5 kDa protein) (Interferon-stimulated gene 12a protein) (ISG12(a)) (ISG12A)
[CD27 TNFRSF7] CD27 antigen (CD27L receptor) (T-cell activation antigen CD27) (T14) (Tumor necrosis factor receptor superfamily member 7) (CD antigen CD27)
[Zc3h12a] Endoribonuclease ZC3H12A (EC 3.1.-.-) (Monocyte chemotactic protein-induced protein 1) (MCP-induced protein 1) (MCPIP-1) (Regnase-1) (Reg1) (Zinc finger CCCH domain-containing protein 12A)
[Tnfsf11 Opgl Rankl Trance] Tumor necrosis factor ligand superfamily member 11 (Osteoclast differentiation factor) (ODF) (Osteoprotegerin ligand) (OPGL) (Receptor activator of nuclear factor kappa-B ligand) (RANKL) (TNF-related activation-induced cytokine) (TRANCE) (CD antigen CD254) [Cleaved into: Tumor necrosis factor ligand superfamily member 11, membrane form; Tumor necrosis factor ligand superfamily member 11, soluble form]
[Tnfrsf14 hvem] Tumor necrosis factor receptor superfamily member 14 (Herpes virus entry mediator A) (Herpesvirus entry mediator A) (HveA) (Tumor necrosis factor receptor-like 2) (TR2) (CD antigen CD270)
[] Genome polyprotein [Cleaved into: P3; Protein 3AB; P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); P2; Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (P3C) (EC 3.4.22.28); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
[TRAF2 TRAP3] TNF receptor-associated factor 2 (EC 2.3.2.27) (E3 ubiquitin-protein ligase TRAF2) (RING-type E3 ubiquitin transferase TRAF2) (Tumor necrosis factor type 2 receptor-associated protein 3)
[ZC3H12A] Ribonuclease ZC3H12A (EC 3.1.-.-) (Zinc finger CCCH domain-containing protein 12A)
[CD40 TNFRSF5] Tumor necrosis factor receptor superfamily member 5 (B-cell surface antigen CD40) (Bp50) (CD40L receptor) (CDw40) (CD antigen CD40)
[FGFR1 BFGFR CEK FGFBR FLG FLT2 HBGFR] Fibroblast growth factor receptor 1 (FGFR-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (BFGFR) (bFGF-R-1) (Fms-like tyrosine kinase 2) (FLT-2) (N-sam) (Proto-oncogene c-Fgr) (CD antigen CD331)
[FAS APT1 FAS1 TNFRSF6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)
[PDGFRA PDGFR2 RHEPDGFRA] Platelet-derived growth factor receptor alpha (PDGF-R-alpha) (PDGFR-alpha) (EC 2.7.10.1) (Alpha platelet-derived growth factor receptor) (Alpha-type platelet-derived growth factor receptor) (CD140 antigen-like family member A) (CD140a antigen) (Platelet-derived growth factor alpha receptor) (Platelet-derived growth factor receptor 2) (PDGFR-2) (CD antigen CD140a)
[TNFSF13B BAFF BLYS TALL1 TNFSF20 ZTNF4 UNQ401/PRO738] Tumor necrosis factor ligand superfamily member 13B (B lymphocyte stimulator) (BLyS) (B-cell-activating factor) (BAFF) (Dendritic cell-derived TNF-like molecule) (TNF- and APOL-related leukocyte expressed ligand 1) (TALL-1) (CD antigen CD257) [Cleaved into: Tumor necrosis factor ligand superfamily member 13b, membrane form; Tumor necrosis factor ligand superfamily member 13b, soluble form]
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[PDGFRB PDGFR PDGFR1] Platelet-derived growth factor receptor beta (PDGF-R-beta) (PDGFR-beta) (EC 2.7.10.1) (Beta platelet-derived growth factor receptor) (Beta-type platelet-derived growth factor receptor) (CD140 antigen-like family member B) (Platelet-derived growth factor receptor 1) (PDGFR-1) (CD antigen CD140b)
[MVB12A CFBP FAM125A] Multivesicular body subunit 12A (CIN85/CD2AP family-binding protein) (ESCRT-I complex subunit MVB12A) (Protein FAM125A)
[PPP1R12A MBS MYPT1] Protein phosphatase 1 regulatory subunit 12A (Myosin phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit)
[FGFR2 BEK KGFR KSAM] Fibroblast growth factor receptor 2 (FGFR-2) (EC 2.7.10.1) (K-sam) (KGFR) (Keratinocyte growth factor receptor) (CD antigen CD332)
[Fas Apt1 Tnfrsf6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)
[Fgfr1 Flg] Fibroblast growth factor receptor 1 (FGFR-1) (bFGF-R-1) (EC 2.7.10.1) (Basic fibroblast growth factor receptor 1) (MFR) (Proto-oncogene c-Fgr) (CD antigen CD331)
[NGFR TNFRSF16] Tumor necrosis factor receptor superfamily member 16 (Gp80-LNGFR) (Low affinity neurotrophin receptor p75NTR) (Low-affinity nerve growth factor receptor) (NGF receptor) (p75 ICD) (CD antigen CD271)
[env] Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]
[NR1H4 BAR FXR HRR1 RIP14] Bile acid receptor (Farnesoid X-activated receptor) (Farnesol receptor HRR-1) (Nuclear receptor subfamily 1 group H member 4) (Retinoid X receptor-interacting protein 14) (RXR-interacting protein 14)
[Fas Apt1 Tnfrsf6] Tumor necrosis factor receptor superfamily member 6 (Apo-1 antigen) (Apoptosis-mediating surface antigen FAS) (FASLG receptor) (CD antigen CD95)

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