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Pathways : WP1614: 1- and 2-Methylnaphthalene degradationWP101: Synthesis and Degradation of Ketone BodiesWP172: m-cresol degradationWP60: Toluene degradationWP1633: Bisphenol A degradationWP349: Synthesis and Degradation of Ketone BodiesWP1646: Ethylbenzene degradationWP432: Asparagine degradationWP1134: Synthesis and Degradation of Ketone BodiesWP181: P-cymene DegradationWP841: Proteasome DegradationWP1451: Valine, leucine and isoleucine degradationWP2231: Degradation of apoptotic cellsWP99: Glutamate degradation VIIIWP1654: gamma-Hexachlorocyclohexane degradationWP46: Methionine DegradationWP1673: Naphthalene and anthracene degradationWP519: Proteasome DegradationWP1613: 1,4-Dichlorobenzene degradationWP281: Proteasome DegradationWP311: Synthesis and Degradation of Ketone BodiesWP1706: Synthesis and degradation of ketone bodiesWP546: Lactose degradationWP1623: Atrazine degradationWP573: Phenylalanine Degradation Related Genes : [fur7] Furaquinocin biosynthesis prenyltransferase (EC 2.5.1.124) (EC 2.5.1.125) (6-linalyl-2-O,3-dimethylflaviolin synthase) (7-geranyloxy-5-hydroxy-2-methoxy-3-methylnaphthalene-1,4-dione synthase) [ufd-2 T05H10.5] Ubiquitin conjugation factor E4 ufd-2 (EC 2.3.2.27) (E4 ubiquitin-protein ligase ufd-2) (RING-type E3 ubiquitin transferase E4) (Ubiquitin fusion degradation protein 2) [ufd-1 F19B6.2] Ubiquitin fusion degradation protein 1 homolog (UB fusion protein 1) [lmo2213] Heme-degrading monooxygenase (EC 1.14.-.-) (Heme oxygenase) (IsdG-type heme-degradation enzyme) (Isd-LmHde) [ladA GTNG_3499] Long-chain alkane monooxygenase (EC 1.14.14.28) (Long-chain alkane degradation protein A) [ABC1K1 ACDO1 BDR1 PGR6 At4g31390 F3L17.6] Protein ACTIVITY OF BC1 COMPLEX KINASE 1, chloroplastic (ABC1-LIKE KINASE 1) (EC 2.7.-.-) (EC 2.7.11.1) (Protein ABC1-LIKE KINASE RELATED TO CHLOROPHYLL DEGRADATION AND OXIDATIVE STRESS 1) (AtACDO1) (Protein BLEACHING AND DWARF IN RED LIGHT 1) (Protein PROTON GRADIENT REGULATION 6) [tesA c0615] Thioesterase 1/protease 1/lysophospholipase L1 (TAP) (Acyl-CoA thioesterase 1) (TESA) (EC 3.1.2.2) (Acyl-CoA thioesterase I) (Arylesterase) (EC 3.1.1.2) (Lysophospholipase L1) (EC 3.1.1.5) (Oleoyl-[acyl-carrier-protein] hydrolase) (EC 3.1.2.14) (Phospholipid degradation C) (Pldc) (Protease 1) (EC 3.4.21.-) (Protease I) (Thioesterase I/protease I) (TEP-I) [HRD1 DER3 YOL013C] ERAD-associated E3 ubiquitin-protein ligase HRD1 (EC 2.3.2.27) (HMG-CoA reductase degradation protein 1) (RING-type E3 ubiquitin transferase HRD1) [RNR1 DPD2 At2g21790 F7D8.11] Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) (Protein DEFECTIVE IN POLLEN DNA DEGRADATION 2) (Ribonucleoside-diphosphate reductase R1 subunit) (AtRNR1) [DERL2 DER2 FLANA CGI-101 SBBI53] Derlin-2 (Degradation in endoplasmic reticulum protein 2) (DERtrin-2) (Der1-like protein 2) (F-LAN-1) (F-LANa) [TNFAIP1 BACURD2 EDP1] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 (hBACURD2) (BTB/POZ domain-containing protein TNFAIP1) (Protein B12) (Tumor necrosis factor, alpha-induced protein 1, endothelial) [RPN1 HRD2 NAS1 RPD1 YHR027C] 26S proteasome regulatory subunit RPN1 (HMG-CoA reductase degradation protein 2) (Proteasome non-ATPase subunit 1) [UFD1 PIP3 YGR048W] Ubiquitin fusion degradation protein 1 (UB fusion protein 1) (Polymerase-interacting protein 3) [DER1 YBR201W YBR1413] Degradation in the endoplasmic reticulum protein 1 [DPD1 At5g26940 F2P16.200] Exonuclease DPD1, chloroplastic/mitochondrial (EC 3.1.11.-) (Mg2+-dependent DNA exonuclease) (Protein DEFECTIVE IN POLLEN DNA DEGRADATION 1) [TTL At5g58220 MCK7.9] Uric acid degradation bifunctional protein TTL (Transthyretin-like protein) [Includes: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (OHCU decarboxylase) (EC 4.1.1.97); 5-hydroxyisourate hydrolase (HIU hydrolase) (HIUHase) (EC 3.5.2.17)] [Edem3] ER degradation-enhancing alpha-mannosidase-like protein 3 (EC 3.2.1.113) (Alpha-1,2-mannosidase EDEM3) [Derl2 Der2 Flana] Derlin-2 (Degradation in endoplasmic reticulum protein 2) (Der1-like protein 2) (F-LANa) [MNL1 HTM1 YHR204W] ER degradation-enhancing alpha-mannosidase-like protein 1 (EC 3.2.1.24) [EDEM3 C1orf22] ER degradation-enhancing alpha-mannosidase-like protein 3 (EC 3.2.1.113) (Alpha-1,2-mannosidase EDEM3) [DEF1 RIP1 VID31 YKL054C YKL308] RNA polymerase II degradation factor 1 (RRM3-interacting protein 1) [GID8 C20orf11 TWA1] Glucose-induced degradation protein 8 homolog (Two hybrid-associated protein 1 with RanBPM) (Twa1) [UBE4B HDNB1 KIAA0684 UFD2] Ubiquitin conjugation factor E4 B (EC 2.3.2.27) (Homozygously deleted in neuroblastoma 1) (RING-type E3 ubiquitin transferase E4 B) (Ubiquitin fusion degradation protein 2) [DID4 CHM2 GRD7 REN1 VPL2 VPS2 VPT14 YKL002W] DOA4-independent degradation protein 4 (ESCRT-III complex subunit VPS2) (Vacuolar protein-sorting-associated protein 2) (Vacuolar protein-targeting protein 14) [UFD1 UFD1L] Ubiquitin recognition factor in ER-associated degradation protein 1 (Ubiquitin fusion degradation protein 1) (UB fusion protein 1) [DOA1 UFD3 ZZZ4 YKL213C] Protein DOA1 (Degradation of alpha protein 1) (Ubiquitin fusion degradation protein 3) [DERL3 C22orf14 DER3 LLN2] Derlin-3 (Degradation in endoplasmic reticulum protein 3) (DERtrin-3) (Der1-like protein 3) [Ufd1 Ufd1l] Ubiquitin recognition factor in ER-associated degradation protein 1 (Ubiquitin fusion degradation protein 1 homolog) (UB fusion protein 1) [VID30 GID1 YGL227W] Vacuolar import and degradation protein 30 (Glucose-induced degradation protein 1) [] Genome polyprotein [Cleaved into: Capsid protein C (Capsid protein) (Core protein); Protein prM (Precursor membrane protein); Peptide pr (Peptide precursor); Small envelope protein M (Matrix protein); Envelope protein E; Non-structural protein 1 (NS1); Non-structural protein 2A (NS2A); Serine protease subunit NS2B (Flavivirin protease NS2B regulatory subunit) (Non-structural protein 2B); Serine protease NS3 (EC 3.4.21.91) (EC 3.6.1.15) (EC 3.6.4.13) (Flavivirin protease NS3 catalytic subunit) (Non-structural protein 3); Non-structural protein 4A (NS4A); Peptide 2k; Non-structural protein 4B (NS4B); RNA-directed RNA polymerase NS5 (EC 2.1.1.56) (EC 2.1.1.57) (EC 2.7.7.48) (Non-structural protein 5)] Bibliography : [34479119] Beneficial effects of dynamic groundwater flow and redox conditions on Natural Attenuation of mono-, poly-, and NSO-heterocyclic hydrocarbons.[32933736] Polycyclic aromatic hydrocarbons in benthos of the northern Bering Sea Shelf and Chukchi Sea Shelf.[31262174] Mass Transfer Limitation during Slow Anaerobic Biodegradation of 2-Methylnaphthalene.[29630969] Systematic developmental neurotoxicity assessment of a representative PAH Superfund mixture using zebrafish.[29177812] Anaerobic degradation of 1-methylnaphthalene by a member of the Thermoanaerobacteraceae contained in an iron-reducing enrichment culture.[27720249] Assessment of the performance of SMFCs in the bioremediation of PAHs in contaminated marine sediments under different redox conditions and analysis of the associated microbial communities.[26960061] Anaerobic Microbial Degradation of Hydrocarbons: From Enzymatic Reactions to the Environment.[26855125] Hydrogen Isotope Fractionation As a Tool to Identify Aerobic and Anaerobic PAH Biodegradation.[26589947] Genome sequencing reveals mechanisms for heavy metal resistance and polycyclic aromatic hydrocarbon degradation in Delftia lacustris strain LZ-C.[26515037] Chemosensory proteins involved in host recognition in the stored-food mite Tyrophagus putrescentiae.