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The availability of complete genomic sequences and technologies that allow comprehensive analysis of global expression profiles of messenger RNA have greatly expanded our ability to monitor the internal state of a cell. Yet biological systems ultimately need to be explained in terms of the activity, regulation and modification of proteins--and the ubiquitous occurrence of post-transcriptional regulation makes mRNA an imperfect proxy for such information. To facilitate global protein analyses, we have created a Saccharomyces cerevisiae fusion library where each open reading frame is tagged with a high-affinity epitope and expressed from its natural chromosomal location. Through immunodetection of the common tag, we obtain a census of proteins expressed during log-phase growth and measurements of their absolute levels. We find that about 80% of the proteome is expressed during normal growth conditions, and, using additional sequence information, we systematically identify misannotated genes. The abundance of proteins ranges from fewer than 50 to more than 10(6) molecules per cell. Many of these molecules, including essential proteins and most transcription factors, are present at levels that are not readily detectable by other proteomic techniques nor predictable by mRNA levels or codon bias measurements.
Authors : Ghaemmaghami Sina , Huh Won-Ki , Bower Kiowa , Howson Russell W , Belle Archana , Dephoure Noah , O'Shea Erin K , Weissman Jonathan S ,
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WP73: G Protein Signaling Pathways
WP1566: Citrate cycle (TCA cycle)
WP1963: The effect of Glucocorticoids on target gene expression
WP1676: Non-homologous end-joining
WP211: BMP signaling pathway
WP1689: Porphyrin and chlorophyll metabolism
WP928: Mitochondrial Gene Expression
WP1624: Bacterial secretion system
WP1650: Fluorobenzoate degradation
WP1049: G Protein Signaling Pathways
WP1693: Purine metabolism
WP1301: Mitochondrial Gene Expression
WP1713: Two-component system
WP1659: Glycine, serine and threonine metabolism
WP232: G Protein Signaling Pathways
WP1665: Limonene and pinene degradation
WP346: Protein Modifications
WP1438: Influenza A virus infection
WP1888: Post-translational protein modification
WP1531: Vitamin D synthesis
WP1939: Unfolded Protein Response
WP1675: Nitrogen metabolism
WP525: Mitochondrial Unfolded-Protein Response
WP1685: Peptidoglycan biosynthesis
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